RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 GGTA1PQ4G0N0 100 aa5.24□□□□□ -1.57
USP3-215ENST00000559771 CT45A2Q5DJT8 189 aa5.24□□□□□ -1.57
USP3-215ENST00000559771 ZNF628Q5EBL2 1059 aa5.24□□□□□ -1.57
USP3-215ENST00000559771 SGO1Q5FBB7 561 aa5.24□□□□□ -1.57
USP3-215ENST00000559771 TCHHL1Q5QJ38 904 aaPredicted RBP5.24□□□□□ -1.57
USP3-215ENST00000559771 CCNYL2Q5T2Q4 361 aa5.24□□□□□ -1.57
USP3-215ENST00000559771 LGSNQ5TDP6 509 aa5.24□□□□□ -1.57
USP3-215ENST00000559771 HLA-DQA1Q5Y7H0 255 aa5.24□□□□□ -1.57
USP3-215ENST00000559771 TTC19Q6DKK2 380 aaPredicted RBP5.24□□□□□ -1.57
USP3-215ENST00000559771 SLC30A6Q6NXT4 461 aa5.24□□□□□ -1.57
USP3-215ENST00000559771 NUP54Q7Z3B4 507 aa5.24□□□□□ -1.57
USP3-215ENST00000559771 LUZP2Q86TE4 346 aa5.24□□□□□ -1.57
USP3-215ENST00000559771 BIVMQ86UB2 503 aa5.24□□□□□ -1.57
USP3-215ENST00000559771 TRABD2AQ86V40 505 aa5.24□□□□□ -1.57
USP3-215ENST00000559771 PRIMA1Q86XR5 153 aa5.24□□□□□ -1.57
USP3-215ENST00000559771 KIF18BQ86Y91 864 aa5.24□□□□□ -1.57
USP3-215ENST00000559771 C10orf67Q8IYJ2 551 aa5.24□□□□□ -1.57
USP3-215ENST00000559771 GCNT2Q8N0V5 402 aa5.24□□□□□ -1.57
USP3-215ENST00000559771 OR4F6Q8NGB9 312 aa5.24□□□□□ -1.57
USP3-215ENST00000559771 OR4N2Q8NGD1 307 aa5.24□□□□□ -1.57
USP3-215ENST00000559771 OR52R1Q8NGF1 315 aa5.24□□□□□ -1.57
USP3-215ENST00000559771 OR1J4Q8NGS1 313 aa5.24□□□□□ -1.57
USP3-215ENST00000559771 EPS8L3Q8TE67 593 aaKnown RBP5.24□□□□□ -1.57
USP3-215ENST00000559771 TRPC4APQ8TEL6 797 aa5.24□□□□□ -1.57
USP3-215ENST00000559771 ZNF483Q8TF39 744 aaPredicted RBP5.24□□□□□ -1.57
USP3-215ENST00000559771 IGFBPL1Q8WX77 278 aa5.24□□□□□ -1.57
USP3-215ENST00000559771 INTS12Q96CB8 462 aaKnown RBP5.24□□□□□ -1.57
USP3-215ENST00000559771 REPS1Q96D71 796 aa5.24□□□□□ -1.57
USP3-215ENST00000559771 STARD4Q96DR4 205 aa5.24□□□□□ -1.57
USP3-215ENST00000559771 MRRFQ96E11 262 aaKnown RBP5.24□□□□□ -1.57
USP3-215ENST00000559771 PHF21BQ96EK2 531 aa5.24□□□□□ -1.57
USP3-215ENST00000559771 C11orf24Q96F05 449 aaPredicted RBP5.24□□□□□ -1.57
USP3-215ENST00000559771 SLC35A4Q96G79 324 aa5.24□□□□□ -1.57
USP3-215ENST00000559771 LCORQ96JN0 433 aaPredicted RBP5.24□□□□□ -1.57
USP3-215ENST00000559771 C18orf12Q96KH6 178 aa5.24□□□□□ -1.57
USP3-215ENST00000559771 DACH2Q96NX9 599 aa5.24□□□□□ -1.57
USP3-215ENST00000559771 BTBD9Q96Q07 612 aa5.24□□□□□ -1.57
USP3-215ENST00000559771 HBEGFQ99075 208 aa5.24□□□□□ -1.57
USP3-215ENST00000559771 CENPKQ9BS16 269 aa5.24□□□□□ -1.57
USP3-215ENST00000559771 SFXN3Q9BWM7 321 aa5.24□□□□□ -1.57
USP3-215ENST00000559771 RBM24Q9BX46 236 aaKnown RBP5.24□□□□□ -1.57
USP3-215ENST00000559771 OSBPL11Q9BXB4 747 aa5.24□□□□□ -1.57
USP3-215ENST00000559771 C1QTNF3Q9BXJ4 246 aa5.24□□□□□ -1.57
USP3-215ENST00000559771 RTN4RQ9BZR6 473 aa5.24□□□□□ -1.57
USP3-215ENST00000559771 BRINP2Q9C0B6 783 aa5.24□□□□□ -1.57
USP3-215ENST00000559771 ACSS3Q9H6R3 686 aa5.24□□□□□ -1.57
USP3-215ENST00000559771 METTL7AQ9H8H3 244 aa5.24□□□□□ -1.57
USP3-215ENST00000559771 WDR41Q9HAD4 459 aa5.24□□□□□ -1.57
USP3-215ENST00000559771 CPSF2Q9P2I0 782 aaKnown RBP5.24□□□□□ -1.57
USP3-215ENST00000559771 PSMC3IPQ9P2W1 217 aaPredicted RBP5.24□□□□□ -1.57
USP3-215ENST00000559771 XPR1Q9UBH6 696 aa5.24□□□□□ -1.57
USP3-215ENST00000559771 MAPRE3Q9UPY8 281 aa5.24□□□□□ -1.57
USP3-215ENST00000559771 TESMINQ9Y4I5 508 aa5.24□□□□□ -1.57
USP3-215ENST00000559771 ANGPTL3Q9Y5C1 460 aa5.24□□□□□ -1.57
USP3-215ENST00000559771 FBN3Q75N90 2809 aa5.24□□□□□ -1.57
USP3-215ENST00000559771 ANK3Q12955 4377 aaKnown RBP5.24□□□□□ -1.57
USP3-215ENST00000559771 HEATR5AQ86XA9 2040 aa5.23□□□□□ -1.57
USP3-215ENST00000559771 ABCA2Q9BZC7 2435 aa5.23□□□□□ -1.57
USP3-215ENST00000559771 A0A1W2PNV4 684 aa5.23□□□□□ -1.57
USP3-215ENST00000559771 C1orf226A1L170 272 aa5.23□□□□□ -1.57
USP3-215ENST00000559771 PRAMEF25A6NGN4 478 aa5.23□□□□□ -1.57
USP3-215ENST00000559771 FRG2CA6NGY1 282 aa5.23□□□□□ -1.57
USP3-215ENST00000559771 OR6C70A6NIJ9 312 aa5.23□□□□□ -1.57
USP3-215ENST00000559771 H0YC42 278 aa5.23□□□□□ -1.57
USP3-215ENST00000559771 PLOD2O00469 737 aa5.23□□□□□ -1.57
USP3-215ENST00000559771 ACOX3O15254 700 aa5.23□□□□□ -1.57
USP3-215ENST00000559771 HNRNPCL1O60812 293 aaKnown RBP5.23□□□□□ -1.57
USP3-215ENST00000559771 ERAL1O75616 437 aaKnown RBP5.23□□□□□ -1.57
USP3-215ENST00000559771 CBR3O75828 277 aa5.23□□□□□ -1.57
USP3-215ENST00000559771 GOSR1O95249 250 aa5.23□□□□□ -1.57
USP3-215ENST00000559771 LY6G6DO95868 133 aa5.23□□□□□ -1.57
USP3-215ENST00000559771 CGAP01215 116 aa5.23□□□□□ -1.57
USP3-215ENST00000559771 CSNK2A2P19784 350 aaPredicted RBP5.23□□□□□ -1.57
USP3-215ENST00000559771 TYK2P29597 1187 aa5.23□□□□□ -1.57
USP3-215ENST00000559771 ALDH3A1P30838 453 aa5.23□□□□□ -1.57
USP3-215ENST00000559771 SRD5A2P31213 254 aa5.23□□□□□ -1.57
USP3-215ENST00000559771 KIR2DL2P43627 348 aaPredicted RBP5.23□□□□□ -1.57
USP3-215ENST00000559771 CCNG1P51959 295 aa5.23□□□□□ -1.57
USP3-215ENST00000559771 SUCLG1P53597 346 aaKnown RBP5.23□□□□□ -1.57
USP3-215ENST00000559771 MAPK12P53778 367 aa5.23□□□□□ -1.57
USP3-215ENST00000559771 CDH13P55290 713 aa5.23□□□□□ -1.57
USP3-215ENST00000559771 TPD52P55327 224 aaPredicted RBP5.23□□□□□ -1.57
USP3-215ENST00000559771 NKX6-1P78426 367 aaPredicted RBP5.23□□□□□ -1.57
USP3-215ENST00000559771 PHEXP78562 749 aa5.23□□□□□ -1.57
USP3-215ENST00000559771 SRYQ05066 204 aa5.23□□□□□ -1.57
USP3-215ENST00000559771 FAM27E3Q08E93 113 aa5.23□□□□□ -1.57
USP3-215ENST00000559771 PLCXD2Q0VAA5 305 aa5.23□□□□□ -1.57
USP3-215ENST00000559771 TOMM20Q15388 145 aa5.23□□□□□ -1.57
USP3-215ENST00000559771 SF3B4Q15427 424 aaKnown RBP eCLIP5.23□□□□□ -1.575e-7■■■■□ 24
USP3-215ENST00000559771 GUSBP1Q15486 140 aa5.23□□□□□ -1.57
USP3-215ENST00000559771 OR5M10Q6IEU7 315 aa5.23□□□□□ -1.57
USP3-215ENST00000559771 VWA1Q6PCB0 445 aa5.23□□□□□ -1.57
USP3-215ENST00000559771 ZNF474Q6S9Z5 364 aaPredicted RBP5.23□□□□□ -1.57
USP3-215ENST00000559771 TRPM8Q7Z2W7 1104 aa5.23□□□□□ -1.57
USP3-215ENST00000559771 CCDC91Q7Z6B0 441 aa5.23□□□□□ -1.57
USP3-215ENST00000559771 PLCZ1Q86YW0 608 aa5.23□□□□□ -1.57
USP3-215ENST00000559771 C1orf52Q8N6N3 182 aaKnown RBP5.23□□□□□ -1.57
USP3-215ENST00000559771 PPP1R14CQ8TAE6 165 aa5.23□□□□□ -1.57
USP3-215ENST00000559771 RDH11Q8TC12 318 aa5.23□□□□□ -1.57
USP3-215ENST00000559771 ZNF675Q8TD23 568 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms