RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 H3BMQ9 156 aa16.99■□□□□ 0.31
SDR39U1-220ENST00000556548 NKX2-2O95096 273 aa16.99■□□□□ 0.31
SDR39U1-220ENST00000556548 EPHA8P29322 1005 aaPredicted RBP16.99■□□□□ 0.31
SDR39U1-220ENST00000556548 C21orf33P30042 268 aaPredicted RBP16.99■□□□□ 0.31
SDR39U1-220ENST00000556548 GP2P55259 537 aaKnown RBP16.99■□□□□ 0.31
SDR39U1-220ENST00000556548 GPLD1P80108 840 aa16.99■□□□□ 0.31
SDR39U1-220ENST00000556548 TRAM2Q15035 370 aa16.99■□□□□ 0.31
SDR39U1-220ENST00000556548 HLA-BQ31612 363 aa16.99■□□□□ 0.31
SDR39U1-220ENST00000556548 MINDY4Q4G0A6 757 aa16.99■□□□□ 0.31
SDR39U1-220ENST00000556548 FLYWCH1Q4VC44 716 aa16.99■□□□□ 0.31
SDR39U1-220ENST00000556548 NIPAL1Q6NVV3 410 aa16.99■□□□□ 0.31
SDR39U1-220ENST00000556548 GUSBP11Q6P575 273 aa16.99■□□□□ 0.31
SDR39U1-220ENST00000556548 MUL1Q969V5 352 aa16.99■□□□□ 0.31
SDR39U1-220ENST00000556548 COG8Q96MW5 612 aa16.99■□□□□ 0.31
SDR39U1-220ENST00000556548 COPS4Q9BT78 406 aa16.99■□□□□ 0.31
SDR39U1-220ENST00000556548 PNO1Q9NRX1 252 aaKnown RBP16.99■□□□□ 0.31
SDR39U1-220ENST00000556548 CFAP54Q96N23 3096 aa16.99■□□□□ 0.31
SDR39U1-220ENST00000556548 CACNA1EQ15878 2313 aa16.99■□□□□ 0.31
SDR39U1-220ENST00000556548 WDFY3Q8IZQ1 3526 aa16.99■□□□□ 0.31
SDR39U1-220ENST00000556548 H0YIG0 161 aa16.99■□□□□ 0.31
SDR39U1-220ENST00000556548 KIAA0513O60268 411 aa16.99■□□□□ 0.31
SDR39U1-220ENST00000556548 BRINP1O60477 761 aa16.99■□□□□ 0.31
SDR39U1-220ENST00000556548 IGKV1D-16P01601 117 aa16.99■□□□□ 0.31
SDR39U1-220ENST00000556548 TP53P04637 393 aaPredicted RBP16.99■□□□□ 0.31
SDR39U1-220ENST00000556548 DBIP07108 87 aaKnown RBP16.99■□□□□ 0.31
SDR39U1-220ENST00000556548 DCKP27707 260 aa16.99■□□□□ 0.31
SDR39U1-220ENST00000556548 TTKP33981 857 aa16.99■□□□□ 0.31
SDR39U1-220ENST00000556548 HOXD12P35452 270 aa16.99■□□□□ 0.31
SDR39U1-220ENST00000556548 STT3AP46977 705 aa16.99■□□□□ 0.31
SDR39U1-220ENST00000556548 OCA2Q04671 838 aa16.99■□□□□ 0.31
SDR39U1-220ENST00000556548 ST3GAL3Q11203 375 aa16.99■□□□□ 0.31
SDR39U1-220ENST00000556548 ILKQ13418 452 aa16.99■□□□□ 0.31
SDR39U1-220ENST00000556548 ZNHIT3Q15649 155 aaPredicted RBP16.99■□□□□ 0.31
SDR39U1-220ENST00000556548 PLK5Q496M5 336 aa16.99■□□□□ 0.31
SDR39U1-220ENST00000556548 GDF7Q7Z4P5 450 aa16.99■□□□□ 0.31
SDR39U1-220ENST00000556548 WDR5BQ86VZ2 330 aa16.99■□□□□ 0.31
SDR39U1-220ENST00000556548 TMEM255BQ8WV15 326 aa16.99■□□□□ 0.31
SDR39U1-220ENST00000556548 GGHQ92820 318 aa16.99■□□□□ 0.31
SDR39U1-220ENST00000556548 SLC41A3Q96GZ6 507 aa16.99■□□□□ 0.31
SDR39U1-220ENST00000556548 FAM46AQ96IP4 442 aaKnown RBP16.99■□□□□ 0.31
SDR39U1-220ENST00000556548 CHRNA10Q9GZZ6 450 aa16.99■□□□□ 0.31
SDR39U1-220ENST00000556548 SYNDIG1Q9H7V2 258 aa16.99■□□□□ 0.31
SDR39U1-220ENST00000556548 SLC7A7Q9UM01 511 aa16.99■□□□□ 0.31
SDR39U1-220ENST00000556548 TPD52L2O43399 206 aaKnown RBP16.98■□□□□ 0.31
SDR39U1-220ENST00000556548 TDGF1P13385 188 aa16.98■□□□□ 0.31
SDR39U1-220ENST00000556548 ZNF136P52737 540 aa16.98■□□□□ 0.31
SDR39U1-220ENST00000556548 IGLV3-21P80748 117 aaPredicted RBP16.98■□□□□ 0.31
SDR39U1-220ENST00000556548 ALDH6A1Q02252 535 aaKnown RBP16.98■□□□□ 0.31
SDR39U1-220ENST00000556548 NPSR1Q6W5P4 371 aa16.98■□□□□ 0.31
SDR39U1-220ENST00000556548 RRM2BQ7LG56 351 aa16.98■□□□□ 0.31
SDR39U1-220ENST00000556548 BCDIN3DQ7Z5W3 292 aaKnown RBP16.98■□□□□ 0.31
SDR39U1-220ENST00000556548 GPR135Q8IZ08 494 aa16.98■□□□□ 0.31
SDR39U1-220ENST00000556548 D2HGDHQ8N465 521 aa16.98■□□□□ 0.31
SDR39U1-220ENST00000556548 RCBTB1Q8NDN9 531 aa16.98■□□□□ 0.31
SDR39U1-220ENST00000556548 TSLPQ969D9 159 aa16.98■□□□□ 0.31
SDR39U1-220ENST00000556548 IER2Q9BTL4 223 aa16.98■□□□□ 0.31
SDR39U1-220ENST00000556548 SAP130Q9H0E3 1048 aa16.98■□□□□ 0.31
SDR39U1-220ENST00000556548 DSN1Q9H410 356 aa16.98■□□□□ 0.31
SDR39U1-220ENST00000556548 EGLN3Q9H6Z9 239 aa16.98■□□□□ 0.31
SDR39U1-220ENST00000556548 CCDC163A0A0D9SF12 145 aa16.98■□□□□ 0.31
SDR39U1-220ENST00000556548 ZNF99A8MXY4 864 aaPredicted RBP16.98■□□□□ 0.31
SDR39U1-220ENST00000556548 PIP5K1CO60331 668 aa16.98■□□□□ 0.31
SDR39U1-220ENST00000556548 THBS1P07996 1170 aa16.98■□□□□ 0.31
SDR39U1-220ENST00000556548 NID1P14543 1247 aa16.98■□□□□ 0.31
SDR39U1-220ENST00000556548 HOXA6P31267 233 aa16.98■□□□□ 0.31
SDR39U1-220ENST00000556548 HSD17B7P56937 341 aa16.98■□□□□ 0.31
SDR39U1-220ENST00000556548 PERM1Q5SV97 790 aa16.98■□□□□ 0.31
SDR39U1-220ENST00000556548 PDZK1Q5T2W1 519 aa16.98■□□□□ 0.31
SDR39U1-220ENST00000556548 C1orf94Q6P1W5 598 aa16.98■□□□□ 0.31
SDR39U1-220ENST00000556548 MAMSTRQ6ZN01 415 aa16.98■□□□□ 0.31
SDR39U1-220ENST00000556548 MAML2Q8IZL2 1156 aaPredicted RBP16.98■□□□□ 0.31
SDR39U1-220ENST00000556548 ZNF321PQ8N8H1 164 aa16.98■□□□□ 0.31
SDR39U1-220ENST00000556548 C16orf52Q8NHV5 167 aa16.98■□□□□ 0.31
SDR39U1-220ENST00000556548 ADAMTS18Q8TE60 1221 aa16.98■□□□□ 0.31
SDR39U1-220ENST00000556548 RORBQ92753 470 aa16.98■□□□□ 0.31
SDR39U1-220ENST00000556548 CNDP2Q96KP4 475 aaKnown RBP16.98■□□□□ 0.31
SDR39U1-220ENST00000556548 VSTM2LQ96N03 204 aa16.98■□□□□ 0.31
SDR39U1-220ENST00000556548 OR10A5Q9H207 317 aa16.98■□□□□ 0.31
SDR39U1-220ENST00000556548 LANCL2Q9NS86 450 aa16.98■□□□□ 0.31
SDR39U1-220ENST00000556548 NLGN3Q9NZ94 848 aa16.98■□□□□ 0.31
SDR39U1-220ENST00000556548 PSORS1C1Q9UIG5 152 aa16.98■□□□□ 0.31
SDR39U1-220ENST00000556548 PI4KAP42356 2102 aa16.97■□□□□ 0.31
SDR39U1-220ENST00000556548 PATE3B3GLJ2 98 aa16.97■□□□□ 0.31
SDR39U1-220ENST00000556548 SIGLEC6O43699 453 aa16.97■□□□□ 0.31
SDR39U1-220ENST00000556548 ITIH1P19827 911 aa16.97■□□□□ 0.31
SDR39U1-220ENST00000556548 RPS4Y1P22090 263 aaKnown RBP16.97■□□□□ 0.31
SDR39U1-220ENST00000556548 IFNA8P32881 189 aa16.97■□□□□ 0.31
SDR39U1-220ENST00000556548 EIPR1Q53HC9 387 aa16.97■□□□□ 0.31
SDR39U1-220ENST00000556548 VWA2Q5GFL6 755 aa16.97■□□□□ 0.31
SDR39U1-220ENST00000556548 PRPF38BQ5VTL8 546 aaKnown RBP16.97■□□□□ 0.31
SDR39U1-220ENST00000556548 NDC1Q9BTX1 674 aa16.97■□□□□ 0.31
SDR39U1-220ENST00000556548 PLA2G12AQ9BZM1 189 aa16.97■□□□□ 0.31
SDR39U1-220ENST00000556548 PRMT8Q9NR22 394 aaPredicted RBP16.97■□□□□ 0.31
SDR39U1-220ENST00000556548 TVP23BQ9NYZ1 205 aa16.97■□□□□ 0.31
SDR39U1-220ENST00000556548 ZDBF2Q9HCK1 2354 aa16.97■□□□□ 0.31
SDR39U1-220ENST00000556548 MN1Q10571 1320 aaPredicted RBP16.97■□□□□ 0.31
SDR39U1-220ENST00000556548 A0A1B0GTQ1 180 aa16.97■□□□□ 0.31
SDR39U1-220ENST00000556548 C17orf105B2RV13 164 aa16.97■□□□□ 0.31
SDR39U1-220ENST00000556548 LCKP06239 509 aa16.97■□□□□ 0.31
SDR39U1-220ENST00000556548 STSP08842 583 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms