RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 C6orf47O95873 294 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 OLFM2O95897 454 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 VIPP01282 170 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 BCHEP06276 602 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 H1F0P07305 194 aaKnown RBP4.13□□□□□ -1.75
ATXN3-241ENST00000556374 ELANEP08246 267 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 STSP08842 583 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 TSPAN19P0C672 248 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 SP9P0CG40 484 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 C1GALT1C1LP0DN25 315 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 NR2F6P10588 404 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 OSMP13725 252 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 RHCEP18577 417 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 UQCRC2P22695 453 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 CXCR2P25025 360 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 PSMA1P25786 263 aaKnown RBP4.13□□□□□ -1.75
ATXN3-241ENST00000556374 PTPN6P29350 595 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 NTSP30990 170 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 CA5AP35218 305 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 HOXD12P35452 270 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 IFNGR2P38484 337 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 PRLHRP49683 370 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 KHKP50053 298 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 RORCP51449 518 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 WNT3P56703 355 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 OR2B6P58173 313 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 CXADRP78310 365 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 SLC7A9P82251 487 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 B4GALNT1Q00973 533 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 RHAGQ02094 409 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 SEMG2Q02383 582 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 ST3GAL4Q11206 333 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 SLC13A2Q13183 592 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 HEPACAMQ14CZ8 416 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 CDKN3Q16667 212 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 C21orf62-AS1Q17RA5 79 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 TMEM44Q2T9K0 475 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 DCST1Q5T197 706 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 TXNDC8Q6A555 127 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 SP5Q6BEB4 398 aaPredicted RBP4.13□□□□□ -1.75
ATXN3-241ENST00000556374 PLAG1Q6DJT9 500 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 REEP3Q6NUK4 255 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 UNC5DQ6UXZ4 953 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 TMPRSS11AQ6ZMR5 421 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 ZNF517Q6ZMY9 492 aaPredicted RBP4.13□□□□□ -1.75
ATXN3-241ENST00000556374 Q6ZVL8 140 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 MED25Q71SY5 747 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 DPPA4Q7L190 304 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 SZRD1Q7Z422 152 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 COMMD6Q7Z4G1 85 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 TRMT11Q7Z4G4 463 aaKnown RBP4.13□□□□□ -1.75
ATXN3-241ENST00000556374 TMEM173Q86WV6 379 aaPredicted RBP4.13□□□□□ -1.75
ATXN3-241ENST00000556374 RAB43Q86YS6 212 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 TRAPPC5Q8IUR0 188 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 LURAP1LQ8IV03 231 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 TCEAL8Q8IYN2 117 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 NRSN1Q8IZ57 195 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 SLC22A15Q8IZD6 547 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 CMTM8Q8IZV2 173 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 CADM3Q8N126 398 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 TBC1D19Q8N5T2 526 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 PARP16Q8N5Y8 322 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 CLRN3Q8NCR9 226 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 B3GNT7Q8NFL0 401 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 VN1R2Q8NFZ6 395 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 OR7G3Q8NG95 312 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 OR9Q2Q8NGE9 314 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 OR56A3Q8NH54 315 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 OR52J3Q8NH60 311 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 HUS1BQ8NHY5 278 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 ENKURQ8TC29 256 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 WFDC5Q8TCV5 224 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 WFIKKN2Q8TEU8 576 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 APH1BQ8WW43 257 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 SLC5A11Q8WWX8 675 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 NR4A3Q92570 626 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 HOXB13Q92826 284 aaPredicted RBP4.13□□□□□ -1.75
ATXN3-241ENST00000556374 RPL3LQ92901 407 aaKnown RBP4.13□□□□□ -1.75
ATXN3-241ENST00000556374 GLYATL1Q969I3 302 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 TRIM63Q969Q1 353 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 AP2M1Q96CW1 435 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 COQ8BQ96D53 544 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 ALG14Q96F25 216 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 ZNF514Q96K75 400 aaPredicted RBP4.13□□□□□ -1.75
ATXN3-241ENST00000556374 EGLN2Q96KS0 407 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 SLC35G5Q96KT7 338 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 TRNT1Q96Q11 434 aaKnown RBP4.13□□□□□ -1.75
ATXN3-241ENST00000556374 SLC38A2Q96QD8 506 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 PKP4Q99569 1192 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 MGLLQ99685 303 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 BARD1Q99728 777 aaKnown RBP4.13□□□□□ -1.75
ATXN3-241ENST00000556374 KCNS3Q9BQ31 491 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 CLSTN3Q9BQT9 956 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 MRI1Q9BV20 369 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 SPATA5L1Q9BVQ7 753 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 UCK2Q9BZX2 261 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 OR2B2Q9GZK3 357 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 SLC22A4Q9H015 551 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 MS4A5Q9H3V2 200 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 SIAEQ9HAT2 523 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms