RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 SARGQ9BW04 601 aa6.54□□□□□ -1.36
TDP1-213ENST00000555880 RSPH9Q9H1X1 276 aaPredicted RBP6.54□□□□□ -1.36
TDP1-213ENST00000555880 MTHFD2LQ9H903 347 aaPredicted RBP6.54□□□□□ -1.36
TDP1-213ENST00000555880 MARCH7Q9H992 704 aa6.54□□□□□ -1.36
TDP1-213ENST00000555880 ASB6Q9NWX5 421 aa6.54□□□□□ -1.36
TDP1-213ENST00000555880 IL20Q9NYY1 176 aa6.54□□□□□ -1.36
TDP1-213ENST00000555880 TNFRSF10DQ9UBN6 386 aa6.54□□□□□ -1.36
TDP1-213ENST00000555880 PHF11Q9UIL8 331 aa6.54□□□□□ -1.36
TDP1-213ENST00000555880 CES1P1Q9UKY3 287 aa6.54□□□□□ -1.36
TDP1-213ENST00000555880 NDRG2Q9UN36 371 aaKnown RBP6.54□□□□□ -1.36
TDP1-213ENST00000555880 POLHQ9Y253 713 aa6.54□□□□□ -1.36
TDP1-213ENST00000555880 ZNF443Q9Y2A4 671 aaPredicted RBP6.54□□□□□ -1.36
TDP1-213ENST00000555880 GPR55Q9Y2T6 319 aaPredicted RBP6.54□□□□□ -1.36
TDP1-213ENST00000555880 SF3B6Q9Y3B4 125 aaKnown RBP6.54□□□□□ -1.36
TDP1-213ENST00000555880 KCNE3Q9Y6H6 103 aa6.54□□□□□ -1.36
TDP1-213ENST00000555880 STON1Q9Y6Q2 735 aa6.54□□□□□ -1.36
TDP1-213ENST00000555880 DOCK9Q9BZ29 2069 aa6.54□□□□□ -1.36
TDP1-213ENST00000555880 TBC1D3KA0A087X1G2 549 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 A0A1W2PP55 124 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 TBC1D3FA6NER0 549 aaPredicted RBP6.53□□□□□ -1.36
TDP1-213ENST00000555880 ANTXRLA6NF34 631 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 A8MV72 311 aaPredicted RBP6.53□□□□□ -1.36
TDP1-213ENST00000555880 B4DXG7 233 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 C4orf51C9J302 202 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 GABRPO00591 440 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 TRIM3O75382 744 aaPredicted RBP6.53□□□□□ -1.36
TDP1-213ENST00000555880 PAK4O96013 591 aaPredicted RBP6.53□□□□□ -1.36
TDP1-213ENST00000555880 IGHA1P01876 353 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 APODP05090 189 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 YES1P07947 543 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 SLC35G6P0C7Q6 338 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 GALP22466 123 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 CPN2P22792 545 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 TLX1P31314 330 aaPredicted RBP6.53□□□□□ -1.36
TDP1-213ENST00000555880 SSTR4P31391 388 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 WASP42768 502 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 RPS15AP62244 130 aaKnown RBP6.53□□□□□ -1.36
TDP1-213ENST00000555880 DUSP2Q05923 314 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 GPM6BQ13491 265 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 CDK10Q15131 360 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 CEBPEQ15744 281 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 RPE65Q16518 533 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 TUSC1Q2TAM9 212 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 ZNF791Q3KP31 576 aaPredicted RBP6.53□□□□□ -1.36
TDP1-213ENST00000555880 AADACL4Q5VUY2 407 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 TBC1D3GQ6DHY5 549 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 MFSD12Q6NUT3 480 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 ZNF620Q6ZNG0 422 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 CXXC5Q7LFL8 322 aaKnown RBP6.53□□□□□ -1.36
TDP1-213ENST00000555880 GDF7Q7Z4P5 450 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 FBXL6Q8N531 539 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 C12orf76Q8N812 135 aaPredicted RBP6.53□□□□□ -1.36
TDP1-213ENST00000555880 SYT14Q8NB59 555 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 SIMC1Q8NDZ2 872 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 OR4F15Q8NGB8 312 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 LCN9Q8WX39 176 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 ACOT12Q8WYK0 555 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 SLC7A6Q92536 515 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 KLK6Q92876 244 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 FGF13Q92913 245 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 COL26A1Q96A83 441 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 FCRL4Q96PJ5 515 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 SECISBP2Q96T21 854 aaKnown RBP6.53□□□□□ -1.36
TDP1-213ENST00000555880 HDHD5Q9BXW7 423 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 ZFAND3Q9H8U3 227 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 OBP2AQ9NY56 170 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 GDE1Q9NZC3 331 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 OR6C2Q9NZP2 312 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 EXOGQ9Y2C4 368 aaKnown RBP6.53□□□□□ -1.36
TDP1-213ENST00000555880 SLC17A4Q9Y2C5 497 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 WDR45Q9Y484 360 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 PCDHGB7Q9Y5F8 929 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 FAM240BA0A1B0GVZ2 78 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 UNC119BA6NIH7 251 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 CENPBD1B2RD01 187 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 PRICKLE3O43900 615 aaPredicted RBP6.53□□□□□ -1.36
TDP1-213ENST00000555880 HPGDSO60760 199 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 RGS9O75916 674 aaPredicted RBP6.53□□□□□ -1.36
TDP1-213ENST00000555880 HLA-DQB1P01920 261 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 CSF2P04141 144 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 CEACAM5P06731 702 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 ZNF888P0CJ79 500 aaPredicted RBP6.53□□□□□ -1.36
TDP1-213ENST00000555880 PSKH1P11801 424 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 ZNF10P21506 573 aaPredicted RBP6.53□□□□□ -1.36
TDP1-213ENST00000555880 HLA-DMAP28067 261 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 NDUFS1P28331 727 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 TRHRP34981 398 aaPredicted RBP6.53□□□□□ -1.36
TDP1-213ENST00000555880 GJA4P35212 333 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 SOX18P35713 384 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 TALDO1P37837 337 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 EVX1P49640 407 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 PDX1P52945 283 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 CAV3P56539 151 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 ERVK-21P61565 698 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 HOXC5Q00444 222 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 TNFRSF17Q02223 184 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 BDH1Q02338 343 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 ADAM15Q13444 863 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 RUNX3Q13761 415 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 SUZ12Q15022 739 aaKnown RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms