RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 KCNJ5P48544 419 aa16.9■□□□□ 0.3
CPSF2-203ENST00000554290 SUCLG1P53597 346 aaKnown RBP16.9■□□□□ 0.3
CPSF2-203ENST00000554290 TPD52P55327 224 aaPredicted RBP16.9■□□□□ 0.3
CPSF2-203ENST00000554290 CLDN20P56880 219 aa16.9■□□□□ 0.3
CPSF2-203ENST00000554290 SIRPAP78324 504 aa16.9■□□□□ 0.3
CPSF2-203ENST00000554290 PON3Q15166 354 aa16.9■□□□□ 0.3
CPSF2-203ENST00000554290 SGCBQ16585 318 aa16.9■□□□□ 0.3
CPSF2-203ENST00000554290 CDRT4Q8N9R6 151 aa16.9■□□□□ 0.3
CPSF2-203ENST00000554290 FNDC9Q8TBE3 224 aa16.9■□□□□ 0.3
CPSF2-203ENST00000554290 PPCDCQ96CD2 204 aa16.9■□□□□ 0.3
CPSF2-203ENST00000554290 ZBED6CLQ96FA7 236 aaPredicted RBP16.9■□□□□ 0.3
CPSF2-203ENST00000554290 WFIKKN1Q96NZ8 548 aa16.9■□□□□ 0.3
CPSF2-203ENST00000554290 TRMOQ9BU70 441 aa16.9■□□□□ 0.3
CPSF2-203ENST00000554290 MED18Q9BUE0 208 aa16.9■□□□□ 0.3
CPSF2-203ENST00000554290 OPN3Q9H1Y3 402 aaPredicted RBP16.9■□□□□ 0.3
CPSF2-203ENST00000554290 REEP4Q9H6H4 257 aa16.9■□□□□ 0.3
CPSF2-203ENST00000554290 KLHL28Q9NXS3 571 aa16.9■□□□□ 0.3
CPSF2-203ENST00000554290 SMIM23A6NLE4 172 aa16.89■□□□□ 0.29
CPSF2-203ENST00000554290 AZIN1O14977 448 aa16.89■□□□□ 0.29
CPSF2-203ENST00000554290 TBX19O60806 448 aa16.89■□□□□ 0.29
CPSF2-203ENST00000554290 NKX2-2O95096 273 aa16.89■□□□□ 0.29
CPSF2-203ENST00000554290 CD8BP10966 210 aa16.89■□□□□ 0.29
CPSF2-203ENST00000554290 POU2F1P14859 743 aa16.89■□□□□ 0.29
CPSF2-203ENST00000554290 KRT4P19013 534 aa16.89■□□□□ 0.29
CPSF2-203ENST00000554290 HOXC12P31275 282 aa16.89■□□□□ 0.29
CPSF2-203ENST00000554290 PRKAG1P54619 331 aa16.89■□□□□ 0.29
CPSF2-203ENST00000554290 MANFP55145 182 aaKnown RBP16.89■□□□□ 0.29
CPSF2-203ENST00000554290 NKX6-1P78426 367 aaPredicted RBP16.89■□□□□ 0.29
CPSF2-203ENST00000554290 GRAMD1BQ3KR37 738 aa16.89■□□□□ 0.29
CPSF2-203ENST00000554290 ANKRD26P1Q6NSI1 321 aa16.89■□□□□ 0.29
CPSF2-203ENST00000554290 ZNF474Q6S9Z5 364 aaPredicted RBP16.89■□□□□ 0.29
CPSF2-203ENST00000554290 GSPT2Q8IYD1 628 aaKnown RBP16.89■□□□□ 0.29
CPSF2-203ENST00000554290 METTL25Q8N6Q8 603 aa16.89■□□□□ 0.29
CPSF2-203ENST00000554290 WFDC11Q8NEX6 87 aa16.89■□□□□ 0.29
CPSF2-203ENST00000554290 PIK3R3Q92569 461 aa16.89■□□□□ 0.29
CPSF2-203ENST00000554290 SLC9A6Q92581 669 aa16.89■□□□□ 0.29
CPSF2-203ENST00000554290 C12orf65Q9H3J6 166 aaKnown RBP16.89■□□□□ 0.29
CPSF2-203ENST00000554290 SH3BP4Q9P0V3 963 aa16.89■□□□□ 0.29
CPSF2-203ENST00000554290 A0A1W2PPR1 153 aa16.88■□□□□ 0.29
CPSF2-203ENST00000554290 C16orf97H3BN30 126 aa16.88■□□□□ 0.29
CPSF2-203ENST00000554290 ARHGEF9O43307 516 aa16.88■□□□□ 0.29
CPSF2-203ENST00000554290 AKAP10O43572 662 aa16.88■□□□□ 0.29
CPSF2-203ENST00000554290 NDUFB5O43674 189 aa16.88■□□□□ 0.29
CPSF2-203ENST00000554290 GMFGO60234 142 aa16.88■□□□□ 0.29
CPSF2-203ENST00000554290 CGAP01215 116 aa16.88■□□□□ 0.29
CPSF2-203ENST00000554290 IGKV1D-16P01601 117 aa16.88■□□□□ 0.29
CPSF2-203ENST00000554290 UGT2B10P36537 528 aa16.88■□□□□ 0.29
CPSF2-203ENST00000554290 MAP3K8P41279 467 aa16.88■□□□□ 0.29
CPSF2-203ENST00000554290 SHEQ5VZ18 495 aa16.88■□□□□ 0.29
CPSF2-203ENST00000554290 APOOLQ6UXV4 268 aa16.88■□□□□ 0.29
CPSF2-203ENST00000554290 RNF165Q6ZSG1 346 aa16.88■□□□□ 0.29
CPSF2-203ENST00000554290 Q6ZSR9 355 aa16.88■□□□□ 0.29
CPSF2-203ENST00000554290 SZRD1Q7Z422 152 aa16.88■□□□□ 0.29
CPSF2-203ENST00000554290 EXOC3L1Q86VI1 746 aa16.88■□□□□ 0.29
CPSF2-203ENST00000554290 C10orf107Q8IVU9 208 aa16.88■□□□□ 0.29
CPSF2-203ENST00000554290 ZNF610Q8N9Z0 462 aa16.88■□□□□ 0.29
CPSF2-203ENST00000554290 NUP43Q8NFH3 380 aa16.88■□□□□ 0.29
CPSF2-203ENST00000554290 HOXB13Q92826 284 aaPredicted RBP16.88■□□□□ 0.29
CPSF2-203ENST00000554290 CIDECQ96AQ7 238 aaPredicted RBP16.88■□□□□ 0.29
CPSF2-203ENST00000554290 TSSK3Q96PN8 268 aa16.88■□□□□ 0.29
CPSF2-203ENST00000554290 PRRG4Q9BZD6 226 aa16.88■□□□□ 0.29
CPSF2-203ENST00000554290 GSX1Q9H4S2 264 aaPredicted RBP16.88■□□□□ 0.29
CPSF2-203ENST00000554290 ACSS1Q9NUB1 689 aaPredicted RBP16.88■□□□□ 0.29
CPSF2-203ENST00000554290 C6orf203Q9P0P8 240 aaPredicted RBP16.88■□□□□ 0.29
CPSF2-203ENST00000554290 NTMQ9P121 344 aa16.88■□□□□ 0.29
CPSF2-203ENST00000554290 PROCRQ9UNN8 238 aa16.88■□□□□ 0.29
CPSF2-203ENST00000554290 TMED5Q9Y3A6 229 aa16.88■□□□□ 0.29
CPSF2-203ENST00000554290 FIS1Q9Y3D6 152 aa16.88■□□□□ 0.29
CPSF2-203ENST00000554290 PTGDR2Q9Y5Y4 395 aa16.88■□□□□ 0.29
CPSF2-203ENST00000554290 MED12LQ86YW9 2145 aa16.88■□□□□ 0.29
CPSF2-203ENST00000554290 A0A087WZY1 265 aa16.87■□□□□ 0.29
CPSF2-203ENST00000554290 UQCRHLA0A096LP55 91 aa16.87■□□□□ 0.29
CPSF2-203ENST00000554290 ALG1L2C9J202 215 aa16.87■□□□□ 0.29
CPSF2-203ENST00000554290 TRIM13O60858 407 aa16.87■□□□□ 0.29
CPSF2-203ENST00000554290 NGFRP08138 427 aa16.87■□□□□ 0.29
CPSF2-203ENST00000554290 LINC00032P0C843 101 aa16.87■□□□□ 0.29
CPSF2-203ENST00000554290 HPGDP15428 266 aa16.87■□□□□ 0.29
CPSF2-203ENST00000554290 ZNF17P17021 662 aa16.87■□□□□ 0.29
CPSF2-203ENST00000554290 DDX5P17844 614 aaKnown RBP16.87■□□□□ 0.29
CPSF2-203ENST00000554290 SDC1P18827 310 aa16.87■□□□□ 0.29
CPSF2-203ENST00000554290 CRYGSP22914 178 aa16.87■□□□□ 0.29
CPSF2-203ENST00000554290 TMEM44Q2T9K0 475 aa16.87■□□□□ 0.29
CPSF2-203ENST00000554290 RFTN2Q52LD8 501 aaPredicted RBP16.87■□□□□ 0.29
CPSF2-203ENST00000554290 FAM214BQ7L5A3 538 aa16.87■□□□□ 0.29
CPSF2-203ENST00000554290 BIVMQ86UB2 503 aa16.87■□□□□ 0.29
CPSF2-203ENST00000554290 OR6Y1Q8NGX8 325 aa16.87■□□□□ 0.29
CPSF2-203ENST00000554290 OR4C3Q8NH37 302 aa16.87■□□□□ 0.29
CPSF2-203ENST00000554290 MTERF3Q96E29 417 aa16.87■□□□□ 0.29
CPSF2-203ENST00000554290 PIK3IP1Q96FE7 263 aa16.87■□□□□ 0.29
CPSF2-203ENST00000554290 C18orf12Q96KH6 178 aa16.87■□□□□ 0.29
CPSF2-203ENST00000554290 FCRL1Q96LA6 429 aa16.87■□□□□ 0.29
CPSF2-203ENST00000554290 MS4A4EQ96PG1 132 aa16.87■□□□□ 0.29
CPSF2-203ENST00000554290 GATA5Q9BWX5 397 aaPredicted RBP16.87■□□□□ 0.29
CPSF2-203ENST00000554290 PAQR5Q9NXK6 330 aaPredicted RBP16.87■□□□□ 0.29
CPSF2-203ENST00000554290 BAIAP2L1Q9UHR4 511 aa16.87■□□□□ 0.29
CPSF2-203ENST00000554290 VDAC3Q9Y277 283 aa16.87■□□□□ 0.29
CPSF2-203ENST00000554290 NIPBLQ6KC79 2804 aaeCLIP16.87■□□□□ 0.29
CPSF2-203ENST00000554290 DEFB108AA8MXU0 73 aa16.86■□□□□ 0.29
CPSF2-203ENST00000554290 EIF1AYO14602 144 aaKnown RBP16.86■□□□□ 0.29
CPSF2-203ENST00000554290 OXSR1O95747 527 aaPredicted RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms