RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 FBXL4Q9UKA2 621 aa7.06□□□□□ -1.28
TDP1-209ENST00000554180 SLC13A4Q9UKG4 626 aa7.06□□□□□ -1.28
TDP1-209ENST00000554180 ZNF443Q9Y2A4 671 aaPredicted RBP7.06□□□□□ -1.28
TDP1-209ENST00000554180 AK5Q9Y6K8 562 aa7.06□□□□□ -1.28
TDP1-209ENST00000554180 PTPRBP23467 1997 aa7.06□□□□□ -1.28
TDP1-209ENST00000554180 SPTBN4Q9H254 2564 aa7.06□□□□□ -1.28
TDP1-209ENST00000554180 A0A1W2PQD3 144 aa7.05□□□□□ -1.28
TDP1-209ENST00000554180 CDHR4A6H8M9 788 aa7.05□□□□□ -1.28
TDP1-209ENST00000554180 TMEM200CA6NKL6 621 aa7.05□□□□□ -1.28
TDP1-209ENST00000554180 PEX1O43933 1283 aa7.05□□□□□ -1.28
TDP1-209ENST00000554180 PRKNO60260 465 aaPredicted RBP7.05□□□□□ -1.28
TDP1-209ENST00000554180 TPST1O60507 370 aa7.05□□□□□ -1.28
TDP1-209ENST00000554180 TSPAN2O60636 221 aa7.05□□□□□ -1.28
TDP1-209ENST00000554180 FMO6PO60774 539 aa7.05□□□□□ -1.28
TDP1-209ENST00000554180 REM1O75628 298 aa7.05□□□□□ -1.28
TDP1-209ENST00000554180 PPM1BO75688 479 aa7.05□□□□□ -1.28
TDP1-209ENST00000554180 DNAJB5O75953 348 aa7.05□□□□□ -1.28
TDP1-209ENST00000554180 CST1P01037 141 aa7.05□□□□□ -1.28
TDP1-209ENST00000554180 RHCEP18577 417 aa7.05□□□□□ -1.28
TDP1-209ENST00000554180 TBXA2RP21731 343 aa7.05□□□□□ -1.28
TDP1-209ENST00000554180 ADH7P40394 386 aa7.05□□□□□ -1.28
TDP1-209ENST00000554180 PTDSS1P48651 473 aaKnown RBP7.05□□□□□ -1.28
TDP1-209ENST00000554180 SESN3P58005 492 aa7.05□□□□□ -1.28
TDP1-209ENST00000554180 FGFBP1Q14512 234 aa7.05□□□□□ -1.28
TDP1-209ENST00000554180 TRIP10Q15642 601 aa7.05□□□□□ -1.28
TDP1-209ENST00000554180 OR2T5Q6IEZ7 315 aa7.05□□□□□ -1.28
TDP1-209ENST00000554180 JMJD6Q6NYC1 403 aaPredicted RBP7.05□□□□□ -1.28
TDP1-209ENST00000554180 ZNF836Q6ZNA1 936 aa7.05□□□□□ -1.28
TDP1-209ENST00000554180 OLIG3Q7RTU3 272 aa7.05□□□□□ -1.28
TDP1-209ENST00000554180 ZAR1Q86SH2 424 aa7.05□□□□□ -1.28
TDP1-209ENST00000554180 CYP4Z1Q86W10 505 aa7.05□□□□□ -1.28
TDP1-209ENST00000554180 CARM1Q86X55 608 aa7.05□□□□□ -1.28
TDP1-209ENST00000554180 VRK2Q86Y07 508 aa7.05□□□□□ -1.28
TDP1-209ENST00000554180 SLC5A8Q8N695 610 aa7.05□□□□□ -1.28
TDP1-209ENST00000554180 OR10Q1Q8NGQ4 319 aa7.05□□□□□ -1.28
TDP1-209ENST00000554180 OR2T29Q8NH02 315 aa7.05□□□□□ -1.28
TDP1-209ENST00000554180 LRTOMTQ8WZ04 291 aa7.05□□□□□ -1.28
TDP1-209ENST00000554180 TTC9Q92623 222 aa7.05□□□□□ -1.28
TDP1-209ENST00000554180 TMBIM1Q969X1 311 aa7.05□□□□□ -1.28
TDP1-209ENST00000554180 EFHD2Q96C19 240 aaPredicted RBP7.05□□□□□ -1.28
TDP1-209ENST00000554180 ZG16BQ96DA0 208 aa7.05□□□□□ -1.28
TDP1-209ENST00000554180 OMA1Q96E52 524 aa7.05□□□□□ -1.28
TDP1-209ENST00000554180 ZNF300Q96RE9 604 aaPredicted RBP7.05□□□□□ -1.28
TDP1-209ENST00000554180 ARHGDIGQ99819 225 aa7.05□□□□□ -1.28
TDP1-209ENST00000554180 OSBPL10Q9BXB5 764 aa7.05□□□□□ -1.28
TDP1-209ENST00000554180 POLR2J2Q9GZM3 115 aaKnown RBP7.05□□□□□ -1.28
TDP1-209ENST00000554180 QRSL1Q9H0R6 528 aaKnown RBP7.05□□□□□ -1.28
TDP1-209ENST00000554180 POLR2J3Q9H1A7 115 aaKnown RBP7.05□□□□□ -1.28
TDP1-209ENST00000554180 ZNF160Q9HCG1 818 aa7.05□□□□□ -1.28
TDP1-209ENST00000554180 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.05□□□□□ -1.28
TDP1-209ENST00000554180 FBXO34Q9NWN3 711 aa7.05□□□□□ -1.28
TDP1-209ENST00000554180 NDUFAF4Q9P032 175 aa7.05□□□□□ -1.28
TDP1-209ENST00000554180 TESQ9UGI8 421 aaKnown RBP7.05□□□□□ -1.28
TDP1-209ENST00000554180 IL17BQ9UHF5 180 aa7.05□□□□□ -1.28
TDP1-209ENST00000554180 PRDM4Q9UKN5 801 aa7.05□□□□□ -1.28
TDP1-209ENST00000554180 ACAD8Q9UKU7 415 aa7.05□□□□□ -1.28
TDP1-209ENST00000554180 ABCG2Q9UNQ0 655 aa7.05□□□□□ -1.28
TDP1-209ENST00000554180 SLC35A3Q9Y2D2 325 aa7.05□□□□□ -1.28
TDP1-209ENST00000554180 YARS2Q9Y2Z4 477 aaKnown RBP7.05□□□□□ -1.28
TDP1-209ENST00000554180 SH3GLB1Q9Y371 365 aa7.05□□□□□ -1.28
TDP1-209ENST00000554180 FAM32AQ9Y421 112 aaKnown RBP7.05□□□□□ -1.28
TDP1-209ENST00000554180 DTNAQ9Y4J8 743 aa7.05□□□□□ -1.28
TDP1-209ENST00000554180 NPFFR2Q9Y5X5 522 aa7.05□□□□□ -1.28
TDP1-209ENST00000554180 ENPP4Q9Y6X5 453 aa7.05□□□□□ -1.28
TDP1-209ENST00000554180 CENPVL1A0A0U1RR11 272 aa7.04□□□□□ -1.28
TDP1-209ENST00000554180 CDC14CA4D256 554 aa7.04□□□□□ -1.28
TDP1-209ENST00000554180 TRABD2BA6NFA1 517 aa7.04□□□□□ -1.28
TDP1-209ENST00000554180 PRAMEF25A6NGN4 478 aa7.04□□□□□ -1.28
TDP1-209ENST00000554180 SERINC4A6NH21 518 aa7.04□□□□□ -1.28
TDP1-209ENST00000554180 ALG1L2C9J202 215 aa7.04□□□□□ -1.28
TDP1-209ENST00000554180 H3BNH8 94 aa7.04□□□□□ -1.28
TDP1-209ENST00000554180 hCG_2039718K7EN88 272 aa7.04□□□□□ -1.28
TDP1-209ENST00000554180 SCDO00767 359 aa7.04□□□□□ -1.28
TDP1-209ENST00000554180 CDK2AP1O14519 115 aa7.04□□□□□ -1.28
TDP1-209ENST00000554180 GNGT2O14610 69 aa7.04□□□□□ -1.28
TDP1-209ENST00000554180 UTS2O95399 124 aa7.04□□□□□ -1.28
TDP1-209ENST00000554180 NADKO95544 446 aaPredicted RBP7.04□□□□□ -1.28
TDP1-209ENST00000554180 OXSR1O95747 527 aaPredicted RBP7.04□□□□□ -1.28
TDP1-209ENST00000554180 EPPINO95925 133 aa7.04□□□□□ -1.28
TDP1-209ENST00000554180 MT-ND1P03886 318 aa7.04□□□□□ -1.28
TDP1-209ENST00000554180 FBXO45P0C2W1 286 aa7.04□□□□□ -1.28
TDP1-209ENST00000554180 CYP4B1P13584 511 aa7.04□□□□□ -1.28
TDP1-209ENST00000554180 LIFP15018 202 aa7.04□□□□□ -1.28
TDP1-209ENST00000554180 HPGDP15428 266 aa7.04□□□□□ -1.28
TDP1-209ENST00000554180 IFNA8P32881 189 aa7.04□□□□□ -1.28
TDP1-209ENST00000554180 VHLP40337 213 aa7.04□□□□□ -1.28
TDP1-209ENST00000554180 OR1E2P47887 323 aa7.04□□□□□ -1.28
TDP1-209ENST00000554180 RFX3P48380 749 aa7.04□□□□□ -1.28
TDP1-209ENST00000554180 RGS8P57771 180 aaPredicted RBP7.04□□□□□ -1.28
TDP1-209ENST00000554180 SMIM11AP58511 58 aa7.04□□□□□ -1.28
TDP1-209ENST00000554180 ATP1A4Q13733 1029 aa7.04□□□□□ -1.28
TDP1-209ENST00000554180 MAPK14Q16539 360 aa7.04□□□□□ -1.28
TDP1-209ENST00000554180 GRAMD1BQ3KR37 738 aa7.04□□□□□ -1.28
TDP1-209ENST00000554180 KLHL26Q53HC5 615 aa7.04□□□□□ -1.28
TDP1-209ENST00000554180 DCAF10Q5QP82 559 aa7.04□□□□□ -1.28
TDP1-209ENST00000554180 PDZK1Q5T2W1 519 aa7.04□□□□□ -1.28
TDP1-209ENST00000554180 MRPL2Q5T653 305 aaKnown RBP7.04□□□□□ -1.28
TDP1-209ENST00000554180 OGFRL1Q5TC84 451 aaPredicted RBP7.04□□□□□ -1.28
TDP1-209ENST00000554180 HMBOX1Q6NT76 420 aa7.04□□□□□ -1.28
TDP1-209ENST00000554180 TCTN3Q6NUS6 607 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms