RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 GDF9O60383 454 aa11.82□□□□□ -0.52
VIPAS39-206ENST00000553888 FOXD2O60548 495 aaPredicted RBP11.82□□□□□ -0.52
VIPAS39-206ENST00000553888 INMTO95050 263 aa11.82□□□□□ -0.52
VIPAS39-206ENST00000553888 CCNYL3P0C7X3 344 aa11.82□□□□□ -0.52
VIPAS39-206ENST00000553888 TNNI3P19429 210 aa11.82□□□□□ -0.52
VIPAS39-206ENST00000553888 CRISP1P54107 249 aa11.82□□□□□ -0.52
VIPAS39-206ENST00000553888 GPLD1P80108 840 aa11.82□□□□□ -0.52
VIPAS39-206ENST00000553888 IGLV3-21P80748 117 aaPredicted RBP11.82□□□□□ -0.52
VIPAS39-206ENST00000553888 ZBED5Q49AG3 693 aa11.82□□□□□ -0.52
VIPAS39-206ENST00000553888 PRICKLE2Q7Z3G6 844 aa11.82□□□□□ -0.52
VIPAS39-206ENST00000553888 BCDIN3DQ7Z5W3 292 aaKnown RBP11.82□□□□□ -0.52
VIPAS39-206ENST00000553888 C16orf52Q8NHV5 167 aa11.82□□□□□ -0.52
VIPAS39-206ENST00000553888 SLC41A2Q96JW4 573 aa11.82□□□□□ -0.52
VIPAS39-206ENST00000553888 NODALQ96S42 347 aa11.82□□□□□ -0.52
VIPAS39-206ENST00000553888 DSN1Q9H410 356 aa11.82□□□□□ -0.52
VIPAS39-206ENST00000553888 GPR179Q6PRD1 2367 aa11.82□□□□□ -0.52
VIPAS39-206ENST00000553888 SYT5O00445 386 aa11.82□□□□□ -0.52
VIPAS39-206ENST00000553888 CYP7B1O75881 506 aa11.82□□□□□ -0.52
VIPAS39-206ENST00000553888 TIAF1O95411 115 aa11.82□□□□□ -0.52
VIPAS39-206ENST00000553888 AGR2O95994 175 aa11.82□□□□□ -0.52
VIPAS39-206ENST00000553888 CLPSP04118 112 aa11.82□□□□□ -0.52
VIPAS39-206ENST00000553888 NR4A1P22736 598 aa11.82□□□□□ -0.52
VIPAS39-206ENST00000553888 HTR2AP28223 471 aa11.82□□□□□ -0.52
VIPAS39-206ENST00000553888 STT3AP46977 705 aa11.82□□□□□ -0.52
VIPAS39-206ENST00000553888 MASP1P48740 699 aa11.82□□□□□ -0.52
VIPAS39-206ENST00000553888 ZNF136P52737 540 aa11.82□□□□□ -0.52
VIPAS39-206ENST00000553888 UGT2B15P54855 530 aa11.82□□□□□ -0.52
VIPAS39-206ENST00000553888 SLC35A2P78381 396 aa11.82□□□□□ -0.52
VIPAS39-206ENST00000553888 NR1D2Q14995 579 aa11.82□□□□□ -0.52
VIPAS39-206ENST00000553888 DHRS4L2Q6PKH6 230 aa11.82□□□□□ -0.52
VIPAS39-206ENST00000553888 CCDC81Q6ZN84 652 aa11.82□□□□□ -0.52
VIPAS39-206ENST00000553888 PLEKHM3Q6ZWE6 761 aa11.82□□□□□ -0.52
VIPAS39-206ENST00000553888 ANKK1Q8NFD2 765 aa11.82□□□□□ -0.52
VIPAS39-206ENST00000553888 OR4C6Q8NH72 309 aa11.82□□□□□ -0.52
VIPAS39-206ENST00000553888 TMEM255BQ8WV15 326 aa11.82□□□□□ -0.52
VIPAS39-206ENST00000553888 ZNF501Q96CX3 271 aaPredicted RBP11.82□□□□□ -0.52
VIPAS39-206ENST00000553888 CNDP2Q96KP4 475 aaKnown RBP11.82□□□□□ -0.52
VIPAS39-206ENST00000553888 VSTM2LQ96N03 204 aa11.82□□□□□ -0.52
VIPAS39-206ENST00000553888 IL4I1Q96RQ9 567 aa11.82□□□□□ -0.52
VIPAS39-206ENST00000553888 STACQ99469 402 aa11.82□□□□□ -0.52
VIPAS39-206ENST00000553888 POLR2J3Q9H1A7 115 aaKnown RBP11.82□□□□□ -0.52
VIPAS39-206ENST00000553888 H0YIG0 161 aa11.81□□□□□ -0.52
VIPAS39-206ENST00000553888 KIAA0513O60268 411 aa11.81□□□□□ -0.52
VIPAS39-206ENST00000553888 BRINP1O60477 761 aa11.81□□□□□ -0.52
VIPAS39-206ENST00000553888 ADAM11O75078 769 aa11.81□□□□□ -0.52
VIPAS39-206ENST00000553888 NKX2-2O95096 273 aa11.81□□□□□ -0.52
VIPAS39-206ENST00000553888 CPNE6O95741 557 aa11.81□□□□□ -0.52
VIPAS39-206ENST00000553888 ADAP00813 363 aa11.81□□□□□ -0.52
VIPAS39-206ENST00000553888 MT-ND2P03891 347 aa11.81□□□□□ -0.52
VIPAS39-206ENST00000553888 RPLP0P05388 317 aaKnown RBP11.81□□□□□ -0.52
VIPAS39-206ENST00000553888 CCDC159P0C7I6 412 aa11.81□□□□□ -0.52
VIPAS39-206ENST00000553888 PCMT1P22061 227 aa11.81□□□□□ -0.52
VIPAS39-206ENST00000553888 ESRRGP62508 458 aa11.81□□□□□ -0.52
VIPAS39-206ENST00000553888 SKP1P63208 163 aa11.81□□□□□ -0.52
VIPAS39-206ENST00000553888 NDUFAF6Q330K2 333 aa11.81□□□□□ -0.52
VIPAS39-206ENST00000553888 PDZK1Q5T2W1 519 aa11.81□□□□□ -0.52
VIPAS39-206ENST00000553888 LILRB1Q8NHL6 650 aaPredicted RBP11.81□□□□□ -0.52
VIPAS39-206ENST00000553888 ZNF566Q969W8 418 aa11.81□□□□□ -0.52
VIPAS39-206ENST00000553888 FAM46AQ96IP4 442 aaKnown RBP11.81□□□□□ -0.52
VIPAS39-206ENST00000553888 ITPAQ9BY32 194 aa11.81□□□□□ -0.52
VIPAS39-206ENST00000553888 PLA2G12AQ9BZM1 189 aa11.81□□□□□ -0.52
VIPAS39-206ENST00000553888 EGLN3Q9H6Z9 239 aa11.81□□□□□ -0.52
VIPAS39-206ENST00000553888 NDUFA13Q9P0J0 144 aa11.81□□□□□ -0.52
VIPAS39-206ENST00000553888 RSL24D1Q9UHA3 163 aaKnown RBP11.81□□□□□ -0.52
VIPAS39-206ENST00000553888 MPDZO75970 2070 aa11.81□□□□□ -0.52
VIPAS39-206ENST00000553888 ARRDC5A6NEK1 342 aa11.81□□□□□ -0.52
VIPAS39-206ENST00000553888 ZAR1LA6NP61 321 aa11.81□□□□□ -0.52
VIPAS39-206ENST00000553888 C17orf105B2RV13 164 aa11.81□□□□□ -0.52
VIPAS39-206ENST00000553888 FADS2O95864 444 aaKnown RBP11.81□□□□□ -0.52
VIPAS39-206ENST00000553888 MSL3P1P0C860 447 aa11.81□□□□□ -0.52
VIPAS39-206ENST00000553888 GABRB1P18505 474 aa11.81□□□□□ -0.52
VIPAS39-206ENST00000553888 RPS4Y1P22090 263 aaKnown RBP11.81□□□□□ -0.52
VIPAS39-206ENST00000553888 NUP107P57740 925 aa11.81□□□□□ -0.52
VIPAS39-206ENST00000553888 GABARAPL2P60520 117 aa11.81□□□□□ -0.52
VIPAS39-206ENST00000553888 EMX1Q04741 257 aaPredicted RBP11.81□□□□□ -0.52
VIPAS39-206ENST00000553888 LARS2Q15031 903 aaKnown RBP11.81□□□□□ -0.52
VIPAS39-206ENST00000553888 PROX2Q3B8N5 592 aa11.81□□□□□ -0.52
VIPAS39-206ENST00000553888 FLYWCH1Q4VC44 716 aa11.81□□□□□ -0.52
VIPAS39-206ENST00000553888 GDF7Q7Z4P5 450 aa11.81□□□□□ -0.52
VIPAS39-206ENST00000553888 KIF18BQ86Y91 864 aa11.81□□□□□ -0.52
VIPAS39-206ENST00000553888 GPR135Q8IZ08 494 aa11.81□□□□□ -0.52
VIPAS39-206ENST00000553888 SLC38A9Q8NBW4 561 aa11.81□□□□□ -0.52
VIPAS39-206ENST00000553888 ISOC1Q96CN7 298 aa11.81□□□□□ -0.52
VIPAS39-206ENST00000553888 DPYSL5Q9BPU6 564 aa11.81□□□□□ -0.52
VIPAS39-206ENST00000553888 CHRNA10Q9GZZ6 450 aa11.81□□□□□ -0.52
VIPAS39-206ENST00000553888 OR10A5Q9H207 317 aa11.81□□□□□ -0.52
VIPAS39-206ENST00000553888 SLC7A7Q9UM01 511 aa11.81□□□□□ -0.52
VIPAS39-206ENST00000553888 PRELID1Q9Y255 219 aa11.81□□□□□ -0.52
VIPAS39-206ENST00000553888 PCDHGA10Q9Y5H3 936 aa11.81□□□□□ -0.52
VIPAS39-206ENST00000553888 HSPE1-MOB4S4R3N1 261 aa11.81□□□□□ -0.52
VIPAS39-206ENST00000553888 ADRA2AP08913 450 aa11.8□□□□□ -0.52
VIPAS39-206ENST00000553888 CT45A8P0DMV1 189 aa11.8□□□□□ -0.52
VIPAS39-206ENST00000553888 CT45A9P0DMV2 189 aa11.8□□□□□ -0.52
VIPAS39-206ENST00000553888 OSMP13725 252 aa11.8□□□□□ -0.52
VIPAS39-206ENST00000553888 C21orf33P30042 268 aaPredicted RBP11.8□□□□□ -0.52
VIPAS39-206ENST00000553888 OCA2Q04671 838 aa11.8□□□□□ -0.52
VIPAS39-206ENST00000553888 TOP3AQ13472 1001 aaPredicted RBP11.8□□□□□ -0.52
VIPAS39-206ENST00000553888 NR0B2Q15466 257 aa11.8□□□□□ -0.52
VIPAS39-206ENST00000553888 CT45A2Q5DJT8 189 aa11.8□□□□□ -0.52
VIPAS39-206ENST00000553888 WDR74Q6RFH5 385 aaPredicted RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms