RNA–Protein interactions for RNA: ENST00000551261.5

LETMD1-229, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 521 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-229ENST00000551261 UBQLN4Q9NRR5 601 aa13.15□□□□□ -0.3
LETMD1-229ENST00000551261 KIF17Q9P2E2 1029 aa13.15□□□□□ -0.3
LETMD1-229ENST00000551261 TMCC3Q9ULS5 477 aa13.15□□□□□ -0.3
LETMD1-229ENST00000551261 SEC16AO15027 2179 aa13.15□□□□□ -0.3
LETMD1-229ENST00000551261 WDFY4Q6ZS81 3184 aa13.15□□□□□ -0.3
LETMD1-229ENST00000551261 DMDP11532 3685 aa13.15□□□□□ -0.31
LETMD1-229ENST00000551261 MUC6Q6W4X9 2439 aa13.14□□□□□ -0.31
LETMD1-229ENST00000551261 MYO15AQ9UKN7 3530 aa13.14□□□□□ -0.31
LETMD1-229ENST00000551261 A0A1W2PQD3 144 aa13.14□□□□□ -0.31
LETMD1-229ENST00000551261 A8MUA0 341 aa13.14□□□□□ -0.31
LETMD1-229ENST00000551261 H0YAE9 185 aa13.14□□□□□ -0.31
LETMD1-229ENST00000551261 H3BNH8 94 aa13.14□□□□□ -0.31
LETMD1-229ENST00000551261 FAAHO00519 579 aa13.14□□□□□ -0.31
LETMD1-229ENST00000551261 SOCS2O14508 198 aa13.14□□□□□ -0.31
LETMD1-229ENST00000551261 ZFAND5O76080 213 aa13.14□□□□□ -0.31
LETMD1-229ENST00000551261 OR5F1O95221 314 aa13.14□□□□□ -0.31
LETMD1-229ENST00000551261 H1F0P07305 194 aaKnown RBP13.14□□□□□ -0.31
LETMD1-229ENST00000551261 ICAM2P13598 275 aa13.14□□□□□ -0.31
LETMD1-229ENST00000551261 HPGDP15428 266 aa13.14□□□□□ -0.31
LETMD1-229ENST00000551261 IL12BP29460 328 aa13.14□□□□□ -0.31
LETMD1-229ENST00000551261 OR1E2P47887 323 aa13.14□□□□□ -0.31
LETMD1-229ENST00000551261 LIMS1P48059 325 aa13.14□□□□□ -0.31
LETMD1-229ENST00000551261 PLCXD2Q0VAA5 305 aa13.14□□□□□ -0.31
LETMD1-229ENST00000551261 MED21Q13503 144 aa13.14□□□□□ -0.31
LETMD1-229ENST00000551261 FGFBP1Q14512 234 aa13.14□□□□□ -0.31
LETMD1-229ENST00000551261 CCNJQ5T5M9 372 aa13.14□□□□□ -0.31
LETMD1-229ENST00000551261 ZNF836Q6ZNA1 936 aa13.14□□□□□ -0.31
LETMD1-229ENST00000551261 SHISA6Q6ZSJ9 500 aa13.14□□□□□ -0.31
LETMD1-229ENST00000551261 ZNF550Q7Z398 422 aa13.14□□□□□ -0.31
LETMD1-229ENST00000551261 VRK2Q86Y07 508 aa13.14□□□□□ -0.31
LETMD1-229ENST00000551261 OR10Q1Q8NGQ4 319 aa13.14□□□□□ -0.31
LETMD1-229ENST00000551261 M1APQ8TC57 530 aa13.14□□□□□ -0.31
LETMD1-229ENST00000551261 PMEPA1Q969W9 287 aa13.14□□□□□ -0.31
LETMD1-229ENST00000551261 WDR77Q9BQA1 342 aaPredicted RBP13.14□□□□□ -0.31
LETMD1-229ENST00000551261 NXF5Q9H1B4 397 aaKnown RBP13.14□□□□□ -0.31
LETMD1-229ENST00000551261 KRCC1Q9NPI7 259 aaPredicted RBP13.14□□□□□ -0.31
LETMD1-229ENST00000551261 EXOSC3Q9NQT5 275 aaKnown RBP13.14□□□□□ -0.31
LETMD1-229ENST00000551261 TCFL5Q9UL49 500 aa13.14□□□□□ -0.31
LETMD1-229ENST00000551261 IGHV1-45A0A0A0MS14 117 aa13.13□□□□□ -0.31
LETMD1-229ENST00000551261 OR6C70A6NIJ9 312 aa13.13□□□□□ -0.31
LETMD1-229ENST00000551261 AGRPO00253 132 aa13.13□□□□□ -0.31
LETMD1-229ENST00000551261 SCDO00767 359 aa13.13□□□□□ -0.31
LETMD1-229ENST00000551261 SLC30A4O14863 429 aa13.13□□□□□ -0.31
LETMD1-229ENST00000551261 DENRO43583 198 aaKnown RBP13.13□□□□□ -0.31
LETMD1-229ENST00000551261 UMODP07911 640 aa13.13□□□□□ -0.31
LETMD1-229ENST00000551261 SDHBP21912 280 aa13.13□□□□□ -0.31
LETMD1-229ENST00000551261 IFNGR2P38484 337 aa13.13□□□□□ -0.31
LETMD1-229ENST00000551261 STAT5AP42229 794 aa13.13□□□□□ -0.31
LETMD1-229ENST00000551261 CDH12P55289 794 aa13.13□□□□□ -0.31
LETMD1-229ENST00000551261 ST3GAL3Q11203 375 aa13.13□□□□□ -0.31
LETMD1-229ENST00000551261 COL9A2Q14055 689 aaPredicted RBP13.13□□□□□ -0.31
LETMD1-229ENST00000551261 SSPNQ14714 243 aa13.13□□□□□ -0.31
LETMD1-229ENST00000551261 MICAQ29983 383 aa13.13□□□□□ -0.31
LETMD1-229ENST00000551261 SWT1Q5T5J6 900 aaKnown RBP13.13□□□□□ -0.31
LETMD1-229ENST00000551261 MRPL2Q5T653 305 aaKnown RBP13.13□□□□□ -0.31
LETMD1-229ENST00000551261 PLAG1Q6DJT9 500 aa13.13□□□□□ -0.31
LETMD1-229ENST00000551261 FAAH2Q6GMR7 532 aa13.13□□□□□ -0.31
LETMD1-229ENST00000551261 LCN10Q6JVE6 187 aa13.13□□□□□ -0.31
LETMD1-229ENST00000551261 FAHD1Q6P587 224 aa13.13□□□□□ -0.31
LETMD1-229ENST00000551261 DEF8Q6ZN54 512 aa13.13□□□□□ -0.31
LETMD1-229ENST00000551261 TSEN54Q7Z6J9 526 aaKnown RBP13.13□□□□□ -0.31
LETMD1-229ENST00000551261 RAB43Q86YS6 212 aa13.13□□□□□ -0.31
LETMD1-229ENST00000551261 MISPQ8IVT2 679 aa13.13□□□□□ -0.31
LETMD1-229ENST00000551261 GALNT4Q8N4A0 578 aa13.13□□□□□ -0.31
LETMD1-229ENST00000551261 OR4C15Q8NGM1 316 aa13.13□□□□□ -0.31
LETMD1-229ENST00000551261 OR6T1Q8NGN1 323 aa13.13□□□□□ -0.31
LETMD1-229ENST00000551261 VANGL1Q8TAA9 524 aaPredicted RBP13.13□□□□□ -0.31
LETMD1-229ENST00000551261 SLC22A8Q8TCC7 542 aa13.13□□□□□ -0.31
LETMD1-229ENST00000551261 MAGEE2Q8TD90 523 aaPredicted RBP13.13□□□□□ -0.31
LETMD1-229ENST00000551261 GIPC3Q8TF64 312 aa13.13□□□□□ -0.31
LETMD1-229ENST00000551261 ADAMTS14Q8WXS8 1223 aa13.13□□□□□ -0.31
LETMD1-229ENST00000551261 CCNL2Q96S94 520 aaPredicted RBP13.13□□□□□ -0.31
LETMD1-229ENST00000551261 FNDC11Q9BVV2 318 aa13.13□□□□□ -0.31
LETMD1-229ENST00000551261 ANKRD60Q9BZ19 345 aa13.13□□□□□ -0.31
LETMD1-229ENST00000551261 QRSL1Q9H0R6 528 aaKnown RBP13.13□□□□□ -0.31
LETMD1-229ENST00000551261 ZNF556Q9HAH1 456 aa13.13□□□□□ -0.31
LETMD1-229ENST00000551261 MMP25Q9NPA2 562 aa13.13□□□□□ -0.31
LETMD1-229ENST00000551261 FARSAQ9Y285 508 aaKnown RBP13.13□□□□□ -0.31
LETMD1-229ENST00000551261 TESMINQ9Y4I5 508 aa13.13□□□□□ -0.31
LETMD1-229ENST00000551261 PCDHGA6Q9Y5G7 932 aa13.13□□□□□ -0.31
LETMD1-229ENST00000551261 SCN2AQ99250 2005 aa13.12□□□□□ -0.31
LETMD1-229ENST00000551261 PRAMEF25A6NGN4 478 aa13.12□□□□□ -0.31
LETMD1-229ENST00000551261 M0R3H8 397 aa13.12□□□□□ -0.31
LETMD1-229ENST00000551261 PDLIM1O00151 329 aa13.12□□□□□ -0.31
LETMD1-229ENST00000551261 TM4SF5O14894 197 aa13.12□□□□□ -0.31
LETMD1-229ENST00000551261 CCNB2O95067 398 aa13.12□□□□□ -0.31
LETMD1-229ENST00000551261 TNFSF15O95150 251 aa13.12□□□□□ -0.31
LETMD1-229ENST00000551261 ADAP00813 363 aa13.12□□□□□ -0.31
LETMD1-229ENST00000551261 TCN2P20062 427 aa13.12□□□□□ -0.31
LETMD1-229ENST00000551261 TNFRSF1BP20333 461 aa13.12□□□□□ -0.31
LETMD1-229ENST00000551261 TBXA2RP21731 343 aa13.12□□□□□ -0.31
LETMD1-229ENST00000551261 IGFBP5P24593 272 aa13.12□□□□□ -0.31
LETMD1-229ENST00000551261 RBMS1P29558 406 aaKnown RBP13.12□□□□□ -0.31
LETMD1-229ENST00000551261 CLK3P49761 638 aaKnown RBP13.12□□□□□ -0.31
LETMD1-229ENST00000551261 TAS2R41P59536 307 aa13.12□□□□□ -0.31
LETMD1-229ENST00000551261 TARDBPQ13148 414 aaKnown RBP eCLIP13.12□□□□□ -0.31
LETMD1-229ENST00000551261 IL18R1Q13478 541 aa13.12□□□□□ -0.31
LETMD1-229ENST00000551261 DNASE1L3Q13609 305 aa13.12□□□□□ -0.31
LETMD1-229ENST00000551261 TRAM2Q15035 370 aa13.12□□□□□ -0.31
LETMD1-229ENST00000551261 PCOLCEQ15113 449 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms