RNA–Protein interactions for RNA: ENST00000551176.1

ERBB3-218, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 277 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-218ENST00000551176 PRPF18Q99633 342 aaKnown RBP6.91□□□□□ -1.3
ERBB3-218ENST00000551176 NPAS1Q99742 590 aa6.91□□□□□ -1.3
ERBB3-218ENST00000551176 TUBA1CQ9BQE3 449 aa6.91□□□□□ -1.3
ERBB3-218ENST00000551176 BTBD2Q9BX70 525 aa6.91□□□□□ -1.3
ERBB3-218ENST00000551176 DPY30Q9C005 99 aa6.91□□□□□ -1.3
ERBB3-218ENST00000551176 PIGUQ9H490 435 aa6.91□□□□□ -1.3
ERBB3-218ENST00000551176 SLCO1B3Q9NPD5 702 aa6.91□□□□□ -1.3
ERBB3-218ENST00000551176 DUSP22Q9NRW4 184 aa6.91□□□□□ -1.3
ERBB3-218ENST00000551176 GIN1Q9NXP7 522 aa6.91□□□□□ -1.3
ERBB3-218ENST00000551176 PPP4R1LQ9P1A2 415 aa6.91□□□□□ -1.3
ERBB3-218ENST00000551176 CAMK2AQ9UQM7 478 aa6.91□□□□□ -1.3
ERBB3-218ENST00000551176 RPH3AQ9Y2J0 694 aaPredicted RBP6.91□□□□□ -1.3
ERBB3-218ENST00000551176 PCDHGB3Q9Y5G1 929 aa6.91□□□□□ -1.3
ERBB3-218ENST00000551176 GPR45Q9Y5Y3 372 aa6.91□□□□□ -1.3
ERBB3-218ENST00000551176 DCHS2Q6V1P9 2916 aa6.9□□□□□ -1.3
ERBB3-218ENST00000551176 SPTAN1Q13813 2472 aaKnown RBP6.9□□□□□ -1.3
ERBB3-218ENST00000551176 NCKAP5O14513 1909 aa6.9□□□□□ -1.3
ERBB3-218ENST00000551176 IGLV3-32A0A0A0MS00 114 aa6.9□□□□□ -1.3
ERBB3-218ENST00000551176 NPIPA5A0A0B4J1W7 369 aa6.9□□□□□ -1.3
ERBB3-218ENST00000551176 CENPVL1A0A0U1RR11 272 aa6.9□□□□□ -1.3
ERBB3-218ENST00000551176 AHRRA9YTQ3 701 aa6.9□□□□□ -1.3
ERBB3-218ENST00000551176 SHISA8B8ZZ34 492 aa6.9□□□□□ -1.3
ERBB3-218ENST00000551176 ALG1L2C9J202 215 aa6.9□□□□□ -1.3
ERBB3-218ENST00000551176 NPIPA7E9PJI5 369 aa6.9□□□□□ -1.3
ERBB3-218ENST00000551176 NPIPB9F8W1W9 429 aa6.9□□□□□ -1.3
ERBB3-218ENST00000551176 H0YC42 278 aa6.9□□□□□ -1.3
ERBB3-218ENST00000551176 RNASET2O00584 256 aaKnown RBP6.9□□□□□ -1.3
ERBB3-218ENST00000551176 CFLARO15519 480 aa6.9□□□□□ -1.3
ERBB3-218ENST00000551176 HNRNPRO43390 633 aaKnown RBP6.9□□□□□ -1.3
ERBB3-218ENST00000551176 OIP5O43482 229 aa6.9□□□□□ -1.3
ERBB3-218ENST00000551176 ANGPTL1O95841 491 aa6.9□□□□□ -1.3
ERBB3-218ENST00000551176 EPPINO95925 133 aa6.9□□□□□ -1.3
ERBB3-218ENST00000551176 NGFRP08138 427 aa6.9□□□□□ -1.3
ERBB3-218ENST00000551176 NPIPA8P0DM63 369 aa6.9□□□□□ -1.3
ERBB3-218ENST00000551176 GABRA1P14867 456 aa6.9□□□□□ -1.3
ERBB3-218ENST00000551176 DDX5P17844 614 aaKnown RBP6.9□□□□□ -1.3
ERBB3-218ENST00000551176 IGFBP2P18065 325 aa6.9□□□□□ -1.3
ERBB3-218ENST00000551176 TBXA2RP21731 343 aa6.9□□□□□ -1.3
ERBB3-218ENST00000551176 CEACAM8P31997 349 aaPredicted RBP6.9□□□□□ -1.3
ERBB3-218ENST00000551176 SOAT1P35610 550 aa6.9□□□□□ -1.3
ERBB3-218ENST00000551176 CDKN2CP42773 168 aa6.9□□□□□ -1.3
ERBB3-218ENST00000551176 ZFP36L2P47974 494 aaKnown RBP6.9□□□□□ -1.3
ERBB3-218ENST00000551176 PRIM2P49643 509 aa6.9□□□□□ -1.3
ERBB3-218ENST00000551176 TPD52P55327 224 aaPredicted RBP6.9□□□□□ -1.3
ERBB3-218ENST00000551176 DSCR4P56555 118 aaPredicted RBP6.9□□□□□ -1.3
ERBB3-218ENST00000551176 CLDN18P56856 261 aa6.9□□□□□ -1.3
ERBB3-218ENST00000551176 SRYQ05066 204 aa6.9□□□□□ -1.3
ERBB3-218ENST00000551176 TP53BP2Q13625 1128 aa6.9□□□□□ -1.3
ERBB3-218ENST00000551176 CD226Q15762 336 aa6.9□□□□□ -1.3
ERBB3-218ENST00000551176 TMEM44Q2T9K0 475 aa6.9□□□□□ -1.3
ERBB3-218ENST00000551176 LSM12Q3MHD2 195 aaKnown RBP6.9□□□□□ -1.3
ERBB3-218ENST00000551176 FAM174BQ3ZCQ3 159 aa6.9□□□□□ -1.3
ERBB3-218ENST00000551176 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.9□□□□□ -1.3
ERBB3-218ENST00000551176 RIPPLY2Q5TAB7 128 aa6.9□□□□□ -1.3
ERBB3-218ENST00000551176 NSUN5P2Q63ZY6 315 aa6.9□□□□□ -1.3
ERBB3-218ENST00000551176 ATG16L1Q676U5 607 aa6.9□□□□□ -1.3
ERBB3-218ENST00000551176 ARSKQ6UWY0 536 aa6.9□□□□□ -1.3
ERBB3-218ENST00000551176 C6orf120Q7Z4R8 191 aa6.9□□□□□ -1.3
ERBB3-218ENST00000551176 SPATA19Q7Z5L4 167 aa6.9□□□□□ -1.3
ERBB3-218ENST00000551176 ADGRE4PQ86SQ3 457 aa6.9□□□□□ -1.3
ERBB3-218ENST00000551176 IFNEQ86WN2 208 aa6.9□□□□□ -1.3
ERBB3-218ENST00000551176 KIRREL3Q8IZU9 778 aa6.9□□□□□ -1.3
ERBB3-218ENST00000551176 NATD1Q8N6N6 113 aa6.9□□□□□ -1.3
ERBB3-218ENST00000551176 COX18Q8N8Q8 333 aa6.9□□□□□ -1.3
ERBB3-218ENST00000551176 C9orf106Q8NAJ2 232 aa6.9□□□□□ -1.3
ERBB3-218ENST00000551176 OR4K17Q8NGC6 315 aa6.9□□□□□ -1.3
ERBB3-218ENST00000551176 OR56A1Q8NGH5 318 aa6.9□□□□□ -1.3
ERBB3-218ENST00000551176 OR4A15Q8NGL6 344 aa6.9□□□□□ -1.3
ERBB3-218ENST00000551176 OR10Q1Q8NGQ4 319 aa6.9□□□□□ -1.3
ERBB3-218ENST00000551176 SFXN5Q8TD22 340 aa6.9□□□□□ -1.3
ERBB3-218ENST00000551176 C1GALT1C1Q96EU7 318 aa6.9□□□□□ -1.3
ERBB3-218ENST00000551176 OR7D2Q96RA2 312 aa6.9□□□□□ -1.3
ERBB3-218ENST00000551176 TRIB1Q96RU8 372 aa6.9□□□□□ -1.3
ERBB3-218ENST00000551176 STACQ99469 402 aa6.9□□□□□ -1.3
ERBB3-218ENST00000551176 TREX2Q9BQ50 279 aaPredicted RBP6.9□□□□□ -1.3
ERBB3-218ENST00000551176 INPP5KQ9BT40 448 aa6.9□□□□□ -1.3
ERBB3-218ENST00000551176 ACTRT3Q9BYD9 372 aa6.9□□□□□ -1.3
ERBB3-218ENST00000551176 TBL1XR1Q9BZK7 514 aa6.9□□□□□ -1.3
ERBB3-218ENST00000551176 TRIM8Q9BZR9 551 aa6.9□□□□□ -1.3
ERBB3-218ENST00000551176 NEUROD4Q9HD90 331 aa6.9□□□□□ -1.3
ERBB3-218ENST00000551176 CHST11Q9NPF2 352 aa6.9□□□□□ -1.3
ERBB3-218ENST00000551176 COQ3Q9NZJ6 369 aa6.9□□□□□ -1.3
ERBB3-218ENST00000551176 DKKL1Q9UK85 242 aa6.9□□□□□ -1.3
ERBB3-218ENST00000551176 MRTO4Q9UKD2 239 aaKnown RBP6.9□□□□□ -1.3
ERBB3-218ENST00000551176 MRPS18CQ9Y3D5 142 aaKnown RBP6.9□□□□□ -1.3
ERBB3-218ENST00000551176 RP1L1Q8IWN7 2480 aaPredicted RBP6.9□□□□□ -1.31
ERBB3-218ENST00000551176 CSMD2Q7Z408 3487 aa6.89□□□□□ -1.31
ERBB3-218ENST00000551176 ICE1Q9Y2F5 2266 aa6.89□□□□□ -1.31
ERBB3-218ENST00000551176 CENPEQ02224 2701 aa6.89□□□□□ -1.31
ERBB3-218ENST00000551176 RNF103-CHMP3A0A140T963 221 aa6.89□□□□□ -1.31
ERBB3-218ENST00000551176 PRSS51A0A1B0GVH4 220 aa6.89□□□□□ -1.31
ERBB3-218ENST00000551176 PRAMEF27A3QJZ7 478 aa6.89□□□□□ -1.31
ERBB3-218ENST00000551176 MBD3L4A6NDZ8 208 aaPredicted RBP6.89□□□□□ -1.31
ERBB3-218ENST00000551176 MBD3L3A6NE82 208 aaPredicted RBP6.89□□□□□ -1.31
ERBB3-218ENST00000551176 MBD3L5A6NJ08 208 aaPredicted RBP6.89□□□□□ -1.31
ERBB3-218ENST00000551176 CD8B2A6NJW9 211 aa6.89□□□□□ -1.31
ERBB3-218ENST00000551176 TRPC5OSA6NMA1 111 aa6.89□□□□□ -1.31
ERBB3-218ENST00000551176 E9PBE3 544 aa6.89□□□□□ -1.31
ERBB3-218ENST00000551176 SLCO1B7G3V0H7 640 aa6.89□□□□□ -1.31
ERBB3-218ENST00000551176 FCMRO60667 390 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms