RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 CLIC1O00299 241 aa7.4□□□□□ -1.23
UBR1-202ENST00000546274 SERPINA3P01011 423 aa7.4□□□□□ -1.23
UBR1-202ENST00000546274 HLA-DQB1P01920 261 aa7.4□□□□□ -1.23
UBR1-202ENST00000546274 HPXP02790 462 aa7.4□□□□□ -1.23
UBR1-202ENST00000546274 TCRBP04435 133 aa7.4□□□□□ -1.23
UBR1-202ENST00000546274 NFYAP23511 347 aaPredicted RBP7.4□□□□□ -1.23
UBR1-202ENST00000546274 KDELR2P33947 212 aa7.4□□□□□ -1.23
UBR1-202ENST00000546274 CD79BP40259 229 aa7.4□□□□□ -1.23
UBR1-202ENST00000546274 NR0B1P51843 470 aaKnown RBP7.4□□□□□ -1.23
UBR1-202ENST00000546274 ITGA1P56199 1179 aa7.4□□□□□ -1.23
UBR1-202ENST00000546274 ZP1P60852 638 aa7.4□□□□□ -1.23
UBR1-202ENST00000546274 MLLT1Q03111 559 aaPredicted RBP7.4□□□□□ -1.23
UBR1-202ENST00000546274 HLXQ14774 488 aaPredicted RBP7.4□□□□□ -1.23
UBR1-202ENST00000546274 USF2Q15853 346 aaPredicted RBP7.4□□□□□ -1.23
UBR1-202ENST00000546274 RNF212Q495C1 297 aa7.4□□□□□ -1.23
UBR1-202ENST00000546274 PLAG1Q6DJT9 500 aa7.4□□□□□ -1.23
UBR1-202ENST00000546274 NOXRED1Q6NXP6 359 aa7.4□□□□□ -1.23
UBR1-202ENST00000546274 MSANTD1Q6ZTZ1 278 aa7.4□□□□□ -1.23
UBR1-202ENST00000546274 LRRC70Q7Z2Q7 622 aa7.4□□□□□ -1.23
UBR1-202ENST00000546274 SLC9B2Q86UD5 537 aa7.4□□□□□ -1.23
UBR1-202ENST00000546274 DCUN1D3Q8IWE4 304 aa7.4□□□□□ -1.23
UBR1-202ENST00000546274 CBARPQ8N350 705 aaPredicted RBP7.4□□□□□ -1.23
UBR1-202ENST00000546274 SYNPOQ8N3V7 929 aa7.4□□□□□ -1.23
UBR1-202ENST00000546274 UXS1Q8NBZ7 420 aa7.4□□□□□ -1.23
UBR1-202ENST00000546274 RNASE11Q8TAA1 199 aaKnown RBP7.4□□□□□ -1.23
UBR1-202ENST00000546274 RBM18Q96H35 190 aaKnown RBP7.4□□□□□ -1.23
UBR1-202ENST00000546274 C7orf34Q96L11 122 aa7.4□□□□□ -1.23
UBR1-202ENST00000546274 APOLD1Q96LR9 279 aa7.4□□□□□ -1.23
UBR1-202ENST00000546274 KCTD7Q96MP8 289 aa7.4□□□□□ -1.23
UBR1-202ENST00000546274 TOX2Q96NM4 488 aa7.4□□□□□ -1.23
UBR1-202ENST00000546274 DPAGT1Q9H3H5 408 aa7.4□□□□□ -1.23
UBR1-202ENST00000546274 ENAMQ9NRM1 1142 aa7.4□□□□□ -1.23
UBR1-202ENST00000546274 RLIMQ9NVW2 624 aa7.4□□□□□ -1.23
UBR1-202ENST00000546274 EXTL2Q9UBQ6 330 aa7.4□□□□□ -1.23
UBR1-202ENST00000546274 PISDQ9UG56 409 aa7.4□□□□□ -1.23
UBR1-202ENST00000546274 ING1Q9UK53 422 aaPredicted RBP7.4□□□□□ -1.23
UBR1-202ENST00000546274 IGLV3-16A0A075B6K0 115 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 MEX3AA1L020 520 aaKnown RBP7.39□□□□□ -1.23
UBR1-202ENST00000546274 G3V3Q6 166 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 ADAMDEC1O15204 470 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 CSO75390 466 aaKnown RBP7.39□□□□□ -1.23
UBR1-202ENST00000546274 IL1AP01583 271 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 MBP02144 154 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 NSG1P42857 185 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 BDKRB1P46663 353 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 GCGRP47871 477 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 EVX1P49640 407 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 KCNJ10P78508 379 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 BCL2L1Q07817 233 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 ATP13A5Q4VNC0 1218 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 CCDC157Q569K6 752 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 MANEAQ5SRI9 462 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 Q6ZNB5 142 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 PTCHD4Q6ZW05 846 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 TGIF2LXQ8IUE1 241 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 NKAIN4Q8IVV8 208 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 CMIPQ8IY22 773 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 CCDC116Q8IYX3 515 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 CLECL1Q8IZS7 167 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 TMEM185AQ8NFB2 350 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 ASB11Q8WXH4 323 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 TM9SF4Q92544 642 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 S100PBPQ96BU1 408 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 C11orf24Q96F05 449 aaPredicted RBP7.39□□□□□ -1.23
UBR1-202ENST00000546274 WDR89Q96FK6 387 aaPredicted RBP7.39□□□□□ -1.23
UBR1-202ENST00000546274 PAWRQ96IZ0 340 aaKnown RBP7.39□□□□□ -1.23
UBR1-202ENST00000546274 MS4A4EQ96PG1 132 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 NELL2Q99435 816 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 THAP7Q9BT49 309 aaPredicted RBP7.39□□□□□ -1.23
UBR1-202ENST00000546274 SLC12A9Q9BXP2 914 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 CACNG6Q9BXT2 260 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 GSDMCQ9BYG8 508 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 REEP4Q9H6H4 257 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 GAREM1Q9H706 876 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 TMEM184CQ9NVA4 438 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 PHF11Q9UIL8 331 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 CA5BQ9Y2D0 317 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 PCDHB7Q9Y5E2 793 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 ABHD14A-ACY1A0A1B0GW23 586 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 GSAPA4D1B5 854 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 CXorf65A6NEN9 183 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 URADA6NGE7 173 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 ZNF879B4DU55 563 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 LCMT2O60294 686 aaKnown RBP7.39□□□□□ -1.23
UBR1-202ENST00000546274 GCM2O75603 506 aaPredicted RBP7.39□□□□□ -1.23
UBR1-202ENST00000546274 IGF2P01344 180 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 KIR3DL1P43629 444 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 PTSQ03393 145 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 ELAVL2Q12926 359 aaKnown RBP7.39□□□□□ -1.23
UBR1-202ENST00000546274 SF1Q15637 639 aaKnown RBP7.39□□□□□ -1.23
UBR1-202ENST00000546274 ARHGAP15Q53QZ3 475 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 RAET1GQ6H3X3 334 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 PDE12Q6L8Q7 609 aaKnown RBP7.39□□□□□ -1.23
UBR1-202ENST00000546274 MTFR2Q6P444 385 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 ZNF730Q6ZMV8 503 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 USP30Q70CQ3 517 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 UBE2R2Q712K3 238 aaPredicted RBP7.39□□□□□ -1.23
UBR1-202ENST00000546274 ZNF687Q8N1G0 1237 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 SLC5A8Q8N695 610 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 CLDN22Q8N7P3 220 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms