RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 TMEM168Q9H0V1 697 aa14.04□□□□□ -0.16
CHFR-223ENST00000544268 TBC1D29Q9UFV1 150 aa14.04□□□□□ -0.16
CHFR-223ENST00000544268 SCN3AQ9NY46 2000 aa14.04□□□□□ -0.16
CHFR-223ENST00000544268 ZAR1LA6NP61 321 aa14.03□□□□□ -0.16
CHFR-223ENST00000544268 C5orf58C9J3I9 102 aa14.03□□□□□ -0.16
CHFR-223ENST00000544268 APOL3O95236 402 aa14.03□□□□□ -0.16
CHFR-223ENST00000544268 EML2O95834 649 aa14.03□□□□□ -0.16
CHFR-223ENST00000544268 CSF3P09919 207 aa14.03□□□□□ -0.16
CHFR-223ENST00000544268 RHCEP18577 417 aa14.03□□□□□ -0.16
CHFR-223ENST00000544268 PTNP21246 168 aa14.03□□□□□ -0.16
CHFR-223ENST00000544268 RPS19P39019 145 aaKnown RBP14.03□□□□□ -0.16
CHFR-223ENST00000544268 RORCP51449 518 aa14.03□□□□□ -0.16
CHFR-223ENST00000544268 CRISP1P54107 249 aa14.03□□□□□ -0.16
CHFR-223ENST00000544268 PER3P56645 1201 aa14.03□□□□□ -0.16
CHFR-223ENST00000544268 YPEL5P62699 121 aa14.03□□□□□ -0.16
CHFR-223ENST00000544268 DBPQ10586 325 aaPredicted RBP14.03□□□□□ -0.16
CHFR-223ENST00000544268 BAMBIQ13145 260 aa14.03□□□□□ -0.16
CHFR-223ENST00000544268 MAB21L1Q13394 359 aa14.03□□□□□ -0.16
CHFR-223ENST00000544268 ZNF267Q14586 743 aaPredicted RBP14.03□□□□□ -0.16
CHFR-223ENST00000544268 ALG11Q2TAA5 492 aa14.03□□□□□ -0.16
CHFR-223ENST00000544268 PLET1Q6UQ28 207 aa14.03□□□□□ -0.16
CHFR-223ENST00000544268 LAX1Q8IWV1 398 aa14.03□□□□□ -0.16
CHFR-223ENST00000544268 GDPD1Q8N9F7 314 aa14.03□□□□□ -0.16
CHFR-223ENST00000544268 NLGN4YQ8NFZ3 816 aaPredicted RBP14.03□□□□□ -0.16
CHFR-223ENST00000544268 C9orf43Q8TAL5 461 aaPredicted RBP14.03□□□□□ -0.16
CHFR-223ENST00000544268 SLC22A8Q8TCC7 542 aa14.03□□□□□ -0.16
CHFR-223ENST00000544268 ASPNQ9BXN1 380 aa14.03□□□□□ -0.16
CHFR-223ENST00000544268 BARHL1Q9BZE3 327 aa14.03□□□□□ -0.16
CHFR-223ENST00000544268 REV1Q9UBZ9 1251 aa14.03□□□□□ -0.16
CHFR-223ENST00000544268 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.03□□□□□ -0.16
CHFR-223ENST00000544268 ALG5Q9Y673 324 aa14.03□□□□□ -0.16
CHFR-223ENST00000544268 C19orf67A6NJJ6 358 aa14.03□□□□□ -0.16
CHFR-223ENST00000544268 TSPAN4O14817 238 aa14.03□□□□□ -0.16
CHFR-223ENST00000544268 PGRMC2O15173 223 aa14.03□□□□□ -0.16
CHFR-223ENST00000544268 OR10H3O60404 316 aa14.03□□□□□ -0.16
CHFR-223ENST00000544268 ZNF217O75362 1048 aa14.03□□□□□ -0.16
CHFR-223ENST00000544268 RASGRP1O95267 797 aa14.03□□□□□ -0.16
CHFR-223ENST00000544268 ELAVL4P26378 380 aaKnown RBP14.03□□□□□ -0.16
CHFR-223ENST00000544268 ETV1P50549 477 aa14.03□□□□□ -0.16
CHFR-223ENST00000544268 HMGA2P52926 109 aa14.03□□□□□ -0.16
CHFR-223ENST00000544268 PCBP4P57723 403 aaKnown RBP14.03□□□□□ -0.16
CHFR-223ENST00000544268 HOXC5Q00444 222 aa14.03□□□□□ -0.16
CHFR-223ENST00000544268 RHAGQ02094 409 aa14.03□□□□□ -0.16
CHFR-223ENST00000544268 GARNL3Q5VVW2 1013 aa14.03□□□□□ -0.16
CHFR-223ENST00000544268 C9orf62Q8N4C0 152 aa14.03□□□□□ -0.16
CHFR-223ENST00000544268 DEFB119Q8N690 84 aa14.03□□□□□ -0.16
CHFR-223ENST00000544268 SLC7A13Q8TCU3 470 aa14.03□□□□□ -0.16
CHFR-223ENST00000544268 SETD7Q8WTS6 366 aaKnown RBP14.03□□□□□ -0.16
CHFR-223ENST00000544268 INTS12Q96CB8 462 aaKnown RBP14.03□□□□□ -0.16
CHFR-223ENST00000544268 ZNF578Q96N58 590 aaPredicted RBP14.03□□□□□ -0.16
CHFR-223ENST00000544268 SLC6A18Q96N87 628 aa14.03□□□□□ -0.16
CHFR-223ENST00000544268 GPA33Q99795 319 aa14.03□□□□□ -0.16
CHFR-223ENST00000544268 TREX2Q9BQ50 279 aaPredicted RBP14.03□□□□□ -0.16
CHFR-223ENST00000544268 ERVMER34-1Q9H9K5 563 aa14.03□□□□□ -0.16
CHFR-223ENST00000544268 MAPRE3Q9UPY8 281 aa14.03□□□□□ -0.16
CHFR-223ENST00000544268 ICKQ9UPZ9 632 aa14.03□□□□□ -0.16
CHFR-223ENST00000544268 CMAHPQ9Y471 501 aa14.03□□□□□ -0.16
CHFR-223ENST00000544268 KCNE3Q9Y6H6 103 aa14.03□□□□□ -0.16
CHFR-223ENST00000544268 H3BN98 237 aa14.02□□□□□ -0.16
CHFR-223ENST00000544268 TOR1AO14656 332 aa14.02□□□□□ -0.16
CHFR-223ENST00000544268 TNFRSF10CO14798 259 aa14.02□□□□□ -0.16
CHFR-223ENST00000544268 PLA2G10O15496 165 aa14.02□□□□□ -0.16
CHFR-223ENST00000544268 NDUFS4O43181 175 aa14.02□□□□□ -0.16
CHFR-223ENST00000544268 FRS3O43559 492 aa14.02□□□□□ -0.16
CHFR-223ENST00000544268 SLC28A2O43868 658 aa14.02□□□□□ -0.16
CHFR-223ENST00000544268 GPX5O75715 221 aa14.02□□□□□ -0.16
CHFR-223ENST00000544268 EPPINO95925 133 aa14.02□□□□□ -0.16
CHFR-223ENST00000544268 RAB25P57735 213 aa14.02□□□□□ -0.16
CHFR-223ENST00000544268 RIN1Q13671 783 aa14.02□□□□□ -0.16
CHFR-223ENST00000544268 ARHGAP19Q14CB8 494 aa14.02□□□□□ -0.16
CHFR-223ENST00000544268 SSX1Q16384 188 aa14.02□□□□□ -0.16
CHFR-223ENST00000544268 RPE65Q16518 533 aa14.02□□□□□ -0.16
CHFR-223ENST00000544268 TEX261Q6UWH6 196 aa14.02□□□□□ -0.16
CHFR-223ENST00000544268 FAM131AQ6UXB0 335 aa14.02□□□□□ -0.16
CHFR-223ENST00000544268 PRSS42Q7Z5A4 293 aa14.02□□□□□ -0.16
CHFR-223ENST00000544268 WDR36Q8NI36 951 aaKnown RBP14.02□□□□□ -0.16
CHFR-223ENST00000544268 CAMK1GQ96NX5 476 aa14.02□□□□□ -0.16
CHFR-223ENST00000544268 ORAI3Q9BRQ5 295 aa14.02□□□□□ -0.16
CHFR-223ENST00000544268 DPH7Q9BTV6 452 aa14.02□□□□□ -0.16
CHFR-223ENST00000544268 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.02□□□□□ -0.16
CHFR-223ENST00000544268 GLIPR2Q9H4G4 154 aa14.02□□□□□ -0.16
CHFR-223ENST00000544268 TRPC4Q9UBN4 977 aa14.02□□□□□ -0.16
CHFR-223ENST00000544268 KCND3Q9UK17 655 aa14.02□□□□□ -0.16
CHFR-223ENST00000544268 U3KQ87 197 aa14.02□□□□□ -0.16
CHFR-223ENST00000544268 BTN3A3O00478 584 aa14.02□□□□□ -0.17
CHFR-223ENST00000544268 PROM1O43490 865 aa14.02□□□□□ -0.17
CHFR-223ENST00000544268 ERAL1O75616 437 aaKnown RBP14.02□□□□□ -0.17
CHFR-223ENST00000544268 RFPL3O75679 317 aa14.02□□□□□ -0.17
CHFR-223ENST00000544268 RABIFP47224 123 aa14.02□□□□□ -0.17
CHFR-223ENST00000544268 CCT3P49368 545 aaKnown RBP14.02□□□□□ -0.17
CHFR-223ENST00000544268 CCR8P51685 355 aa14.02□□□□□ -0.17
CHFR-223ENST00000544268 CSNK1G2P78368 415 aa14.02□□□□□ -0.17
CHFR-223ENST00000544268 RUNX1T1Q06455 604 aa14.02□□□□□ -0.17
CHFR-223ENST00000544268 KRT33BQ14525 404 aa14.02□□□□□ -0.17
CHFR-223ENST00000544268 PDZK1Q5T2W1 519 aa14.02□□□□□ -0.17
CHFR-223ENST00000544268 ARSKQ6UWY0 536 aa14.02□□□□□ -0.17
CHFR-223ENST00000544268 SMPDL3AQ92484 453 aa14.02□□□□□ -0.17
CHFR-223ENST00000544268 ZG16BQ96DA0 208 aa14.02□□□□□ -0.17
CHFR-223ENST00000544268 MTERF3Q96E29 417 aa14.02□□□□□ -0.17
CHFR-223ENST00000544268 GPR137Q96N19 417 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms