RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 PTRH1Q86Y79 214 aaKnown RBP10.94□□□□□ -0.66
DDB1-223ENST00000543658 ARMC8Q8IUR7 673 aa10.94□□□□□ -0.66
DDB1-223ENST00000543658 BHLHE22Q8NFJ8 381 aaPredicted RBP10.94□□□□□ -0.66
DDB1-223ENST00000543658 OR52P1PQ8NH57 321 aa10.94□□□□□ -0.66
DDB1-223ENST00000543658 OIT3Q8WWZ8 545 aa10.94□□□□□ -0.66
DDB1-223ENST00000543658 PSMF1Q92530 271 aa10.94□□□□□ -0.66
DDB1-223ENST00000543658 TTC9Q92623 222 aa10.94□□□□□ -0.66
DDB1-223ENST00000543658 SGCZQ96LD1 299 aa10.94□□□□□ -0.66
DDB1-223ENST00000543658 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.94□□□□□ -0.661e-6■□□□□ 8.7
DDB1-223ENST00000543658 PCDHAC1Q9H158 963 aa10.94□□□□□ -0.66
DDB1-223ENST00000543658 ZNF552Q9H707 407 aaPredicted RBP10.94□□□□□ -0.66
DDB1-223ENST00000543658 RUBCNLQ9H714 662 aa10.94□□□□□ -0.66
DDB1-223ENST00000543658 HHATLQ9HCP6 504 aa10.94□□□□□ -0.66
DDB1-223ENST00000543658 UBQLN4Q9NRR5 601 aa10.94□□□□□ -0.66
DDB1-223ENST00000543658 ANKRD10Q9NXR5 420 aa10.94□□□□□ -0.66
DDB1-223ENST00000543658 KLHL28Q9NXS3 571 aa10.94□□□□□ -0.66
DDB1-223ENST00000543658 ACTR3BQ9P1U1 418 aa10.94□□□□□ -0.66
DDB1-223ENST00000543658 LRFN1Q9P244 771 aa10.94□□□□□ -0.66
DDB1-223ENST00000543658 SLC7A8Q9UHI5 535 aa10.94□□□□□ -0.66
DDB1-223ENST00000543658 ABCG2Q9UNQ0 655 aa10.94□□□□□ -0.66
DDB1-223ENST00000543658 SAMD4AQ9UPU9 718 aaKnown RBP10.94□□□□□ -0.66
DDB1-223ENST00000543658 DSPPQ9NZW4 1301 aa10.93□□□□□ -0.66
DDB1-223ENST00000543658 PRAMEF27A3QJZ7 478 aa10.93□□□□□ -0.66
DDB1-223ENST00000543658 OR5H15A6NDH6 313 aa10.93□□□□□ -0.66
DDB1-223ENST00000543658 PRAMEF25A6NGN4 478 aa10.93□□□□□ -0.66
DDB1-223ENST00000543658 M0QX08 132 aa10.93□□□□□ -0.66
DDB1-223ENST00000543658 SCO2O43819 266 aa10.93□□□□□ -0.66
DDB1-223ENST00000543658 MAN1A2O60476 641 aa10.93□□□□□ -0.66
DDB1-223ENST00000543658 FCMRO60667 390 aa10.93□□□□□ -0.66
DDB1-223ENST00000543658 SORBS2O94875 1100 aaKnown RBP10.93□□□□□ -0.66
DDB1-223ENST00000543658 OXSR1O95747 527 aaPredicted RBP10.93□□□□□ -0.66
DDB1-223ENST00000543658 ZNF682O95780 498 aa10.93□□□□□ -0.66
DDB1-223ENST00000543658 WDPCPO95876 746 aa10.93□□□□□ -0.66
DDB1-223ENST00000543658 SERPINA1P01009 418 aa10.93□□□□□ -0.66
DDB1-223ENST00000543658 OPN1SWP03999 348 aa10.93□□□□□ -0.66
DDB1-223ENST00000543658 ITGB2P05107 769 aa10.93□□□□□ -0.66
DDB1-223ENST00000543658 PABPC4LP0CB38 370 aaKnown RBP10.93□□□□□ -0.66
DDB1-223ENST00000543658 ENDOUP21128 410 aaKnown RBP10.93□□□□□ -0.66
DDB1-223ENST00000543658 EVI2BP34910 448 aa10.93□□□□□ -0.66
DDB1-223ENST00000543658 ST13P50502 369 aaKnown RBP10.93□□□□□ -0.66
DDB1-223ENST00000543658 PDZK1Q5T2W1 519 aa10.93□□□□□ -0.66
DDB1-223ENST00000543658 PGM2L1Q6PCE3 622 aa10.93□□□□□ -0.66
DDB1-223ENST00000543658 CYP2R1Q6VVX0 501 aa10.93□□□□□ -0.66
DDB1-223ENST00000543658 CCDC80Q76M96 950 aa10.93□□□□□ -0.66
DDB1-223ENST00000543658 EID3Q8N140 333 aa10.93□□□□□ -0.66
DDB1-223ENST00000543658 ZADH2Q8N4Q0 377 aa10.93□□□□□ -0.66
DDB1-223ENST00000543658 GOLM1Q8NBJ4 401 aa10.93□□□□□ -0.66
DDB1-223ENST00000543658 OR10G3Q8NGC4 313 aa10.93□□□□□ -0.66
DDB1-223ENST00000543658 PROX1Q92786 737 aa10.93□□□□□ -0.66
DDB1-223ENST00000543658 POP5Q969H6 163 aaKnown RBP10.93□□□□□ -0.66
DDB1-223ENST00000543658 RSRC1Q96IZ7 334 aaKnown RBP10.93□□□□□ -0.66
DDB1-223ENST00000543658 C5orf34Q96MH7 638 aa10.93□□□□□ -0.66
DDB1-223ENST00000543658 SECISBP2Q96T21 854 aaKnown RBP10.93□□□□□ -0.66
DDB1-223ENST00000543658 OSBPL11Q9BXB4 747 aa10.93□□□□□ -0.66
DDB1-223ENST00000543658 RNF32Q9H0A6 362 aa10.93□□□□□ -0.66
DDB1-223ENST00000543658 SAP130Q9H0E3 1048 aa10.93□□□□□ -0.66
DDB1-223ENST00000543658 QRSL1Q9H0R6 528 aaKnown RBP10.93□□□□□ -0.66
DDB1-223ENST00000543658 TIMMDC1Q9NPL8 285 aa10.93□□□□□ -0.66
DDB1-223ENST00000543658 SDHAF3Q9NRP4 125 aa10.93□□□□□ -0.66
DDB1-223ENST00000543658 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.93□□□□□ -0.66
DDB1-223ENST00000543658 SACM1LQ9NTJ5 587 aa10.93□□□□□ -0.66
DDB1-223ENST00000543658 FBXO34Q9NWN3 711 aa10.93□□□□□ -0.66
DDB1-223ENST00000543658 BAG5Q9UL15 447 aa10.93□□□□□ -0.66
DDB1-223ENST00000543658 ZMIZ1Q9ULJ6 1067 aa10.93□□□□□ -0.66
DDB1-223ENST00000543658 POMPQ9Y244 141 aa10.93□□□□□ -0.66
DDB1-223ENST00000543658 DTNAQ9Y4J8 743 aa10.93□□□□□ -0.66
DDB1-223ENST00000543658 PCDHGA9Q9Y5G4 932 aaKnown RBP10.93□□□□□ -0.66
DDB1-223ENST00000543658 GPC6Q9Y625 555 aaPredicted RBP10.93□□□□□ -0.66
DDB1-223ENST00000543658 CEP295Q9C0D2 2601 aa10.92□□□□□ -0.66
DDB1-223ENST00000543658 AGAP5A6NIR3 686 aa10.92□□□□□ -0.66
DDB1-223ENST00000543658 GTPBP1O00178 669 aaKnown RBP10.92□□□□□ -0.66
DDB1-223ENST00000543658 SUV39H1O43463 412 aa10.92□□□□□ -0.66
DDB1-223ENST00000543658 NDUFB5O43674 189 aa10.92□□□□□ -0.66
DDB1-223ENST00000543658 ZNF354AO60765 605 aaPredicted RBP10.92□□□□□ -0.66
DDB1-223ENST00000543658 UGT2B17O75795 530 aa10.92□□□□□ -0.66
DDB1-223ENST00000543658 CEACAM4O75871 244 aa10.92□□□□□ -0.66
DDB1-223ENST00000543658 F10P00742 488 aa10.92□□□□□ -0.66
DDB1-223ENST00000543658 THBS1P07996 1170 aa10.92□□□□□ -0.66
DDB1-223ENST00000543658 CD46P15529 392 aa10.92□□□□□ -0.66
DDB1-223ENST00000543658 TBXA2RP21731 343 aa10.92□□□□□ -0.66
DDB1-223ENST00000543658 PCBP3P57721 371 aaKnown RBP10.92□□□□□ -0.66
DDB1-223ENST00000543658 TUBA3CQ13748 450 aa10.92□□□□□ -0.66
DDB1-223ENST00000543658 ELOAQ14241 798 aaKnown RBP10.92□□□□□ -0.66
DDB1-223ENST00000543658 OR1C1Q15619 314 aa10.92□□□□□ -0.66
DDB1-223ENST00000543658 ZNF141Q15928 474 aa10.92□□□□□ -0.66
DDB1-223ENST00000543658 TBR1Q16650 682 aa10.92□□□□□ -0.66
DDB1-223ENST00000543658 ZSWIM7Q19AV6 140 aa10.92□□□□□ -0.66
DDB1-223ENST00000543658 ZNF791Q3KP31 576 aaPredicted RBP10.92□□□□□ -0.66
DDB1-223ENST00000543658 TBCELQ5QJ74 424 aa10.92□□□□□ -0.66
DDB1-223ENST00000543658 SLC22A10Q63ZE4 541 aa10.92□□□□□ -0.66
DDB1-223ENST00000543658 LCN8Q6JVE9 175 aa10.92□□□□□ -0.66
DDB1-223ENST00000543658 TUBA3EQ6PEY2 450 aa10.92□□□□□ -0.66
DDB1-223ENST00000543658 LYPD8Q6UX82 237 aa10.92□□□□□ -0.66
DDB1-223ENST00000543658 FKBP9P1Q75LS8 142 aa10.92□□□□□ -0.66
DDB1-223ENST00000543658 HMGN2P46Q86SG4 172 aa10.92□□□□□ -0.66
DDB1-223ENST00000543658 ZAR1Q86SH2 424 aa10.92□□□□□ -0.66
DDB1-223ENST00000543658 SPATA24Q86W54 205 aa10.92□□□□□ -0.66
DDB1-223ENST00000543658 SPPL2CQ8IUH8 684 aa10.92□□□□□ -0.66
DDB1-223ENST00000543658 MISPQ8IVT2 679 aa10.92□□□□□ -0.66
DDB1-223ENST00000543658 TMCO5AQ8N6Q1 288 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms