RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 MRM3Q9HC36 420 aaKnown RBP5.38□□□□□ -1.55
CSMD1-215ENST00000537824 TESQ9UGI8 421 aaKnown RBP5.38□□□□□ -1.55
CSMD1-215ENST00000537824 PTAFRP25105 342 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 PER3P56645 1201 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 SLC9A3R2Q15599 337 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 TMEM173Q86WV6 379 aaPredicted RBP5.38□□□□□ -1.55
CSMD1-215ENST00000537824 OR1M1Q8NGA1 313 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 ZNF596Q8TC21 504 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 IMP4Q96G21 291 aaKnown RBP5.38□□□□□ -1.55
CSMD1-215ENST00000537824 ALPLP05186 524 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 NR0B1P51843 470 aaKnown RBP5.38□□□□□ -1.55
CSMD1-215ENST00000537824 CDC20Q12834 499 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 FIGNL1Q6PIW4 674 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 TMEM220Q6QAJ8 160 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 DPPA4Q7L190 304 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 TIPARPQ7Z3E1 657 aaKnown RBP5.38□□□□□ -1.55
CSMD1-215ENST00000537824 SKA3Q8IX90 412 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 KLHDC8BQ8IXV7 354 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 LSMEM1Q8N8F7 131 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 NTAN1Q96AB6 310 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 SAMD8Q96LT4 415 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 ELF4Q99607 663 aaPredicted RBP5.38□□□□□ -1.55
CSMD1-215ENST00000537824 SPACA1Q9HBV2 294 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 RCE1Q9Y256 329 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 LRP5LA4QPB2 252 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 RNF13O43567 381 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 SMIM10L2AP0DMW4 78 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 SMIM10L2BP0DMW5 78 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 MPIP34949 423 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 MEOX2P50222 304 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 HCCSP53701 268 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 TEX26Q8N6G2 289 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 HORMAD2Q8N7B1 307 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 THAP4Q8WY91 577 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 TAPBPLQ9BX59 468 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.38□□□□□ -1.55
CSMD1-215ENST00000537824 TMEM39AQ9NV64 488 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 DMAC2Q9NW81 257 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 CNTNAP1P78357 1384 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 THADAQ6YHU6 1953 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 DIP2BQ9P265 1576 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 EBLN1P0CF75 366 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 NR2C1P13056 603 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 GP1BBP13224 206 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 CORO1AP31146 461 aaKnown RBP5.38□□□□□ -1.55
CSMD1-215ENST00000537824 CAPSQ13938 189 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 ADPRMQ3LIE5 342 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 PRSS55Q6UWB4 352 aaPredicted RBP5.38□□□□□ -1.55
CSMD1-215ENST00000537824 ANKK1Q8NFD2 765 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 HS6ST2Q96MM7 605 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 GAS2L1Q99501 681 aaPredicted RBP5.38□□□□□ -1.55
CSMD1-215ENST00000537824 SERTAD4Q9NUC0 356 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 TMEM100Q9NV29 134 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 TMEM94Q12767 1356 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 ARGFXA6NJG6 315 aa5.37□□□□□ -1.55
CSMD1-215ENST00000537824 GRXCR1A8MXD5 290 aa5.37□□□□□ -1.55
CSMD1-215ENST00000537824 SOCS7O14512 581 aa5.37□□□□□ -1.55
CSMD1-215ENST00000537824 TCAPO15273 167 aa5.37□□□□□ -1.55
CSMD1-215ENST00000537824 ADAP00813 363 aa5.37□□□□□ -1.55
CSMD1-215ENST00000537824 IL1AP01583 271 aa5.37□□□□□ -1.55
CSMD1-215ENST00000537824 HOXB5P09067 269 aa5.37□□□□□ -1.55
CSMD1-215ENST00000537824 ARNTP27540 789 aa5.37□□□□□ -1.55
CSMD1-215ENST00000537824 HNRNPKP61978 463 aaKnown RBP eCLIP5.37□□□□□ -1.55
CSMD1-215ENST00000537824 SMAD3P84022 425 aaKnown RBP5.37□□□□□ -1.55
CSMD1-215ENST00000537824 ZNF763Q0D2J5 394 aa5.37□□□□□ -1.55
CSMD1-215ENST00000537824 FAM124AQ86V42 546 aa5.37□□□□□ -1.55
CSMD1-215ENST00000537824 LILRA2Q8N149 483 aa5.37□□□□□ -1.55
CSMD1-215ENST00000537824 ZNF561Q8N587 486 aa5.37□□□□□ -1.55
CSMD1-215ENST00000537824 MRPL38Q96DV4 380 aaKnown RBP5.37□□□□□ -1.55
CSMD1-215ENST00000537824 HHIPL1Q96JK4 782 aa5.37□□□□□ -1.55
CSMD1-215ENST00000537824 KCNK12Q9HB15 430 aa5.37□□□□□ -1.55
CSMD1-215ENST00000537824 PATZ1Q9HBE1 687 aaKnown RBP5.37□□□□□ -1.55
CSMD1-215ENST00000537824 FAM212BQ9NTI7 297 aaPredicted RBP5.37□□□□□ -1.55
CSMD1-215ENST00000537824 POLLQ9UGP5 575 aa5.37□□□□□ -1.55
CSMD1-215ENST00000537824 DPP7Q9UHL4 492 aa5.37□□□□□ -1.55
CSMD1-215ENST00000537824 ITGB4P16144 1822 aa5.37□□□□□ -1.55
CSMD1-215ENST00000537824 WASH4PA8MWX3 477 aa5.37□□□□□ -1.55
CSMD1-215ENST00000537824 PHOX2AO14813 284 aa5.37□□□□□ -1.55
CSMD1-215ENST00000537824 KCNK2O95069 426 aa5.37□□□□□ -1.55
CSMD1-215ENST00000537824 ETFAP13804 333 aa5.37□□□□□ -1.55
CSMD1-215ENST00000537824 PCGF2P35227 344 aa5.37□□□□□ -1.55
CSMD1-215ENST00000537824 PDX1P52945 283 aa5.37□□□□□ -1.55
CSMD1-215ENST00000537824 RPL23AP62750 156 aaKnown RBP5.37□□□□□ -1.55
CSMD1-215ENST00000537824 ST3GAL3Q11203 375 aa5.37□□□□□ -1.55
CSMD1-215ENST00000537824 C4orf17Q53FE4 359 aa5.37□□□□□ -1.55
CSMD1-215ENST00000537824 ACTBL2Q562R1 376 aa5.37□□□□□ -1.55
CSMD1-215ENST00000537824 PQLC3Q8N755 202 aa5.37□□□□□ -1.55
CSMD1-215ENST00000537824 OR8J1Q8NGP2 316 aa5.37□□□□□ -1.55
CSMD1-215ENST00000537824 RSC1A1Q92681 617 aa5.37□□□□□ -1.55
CSMD1-215ENST00000537824 ROBO1Q9Y6N7 1651 aa5.37□□□□□ -1.55
CSMD1-215ENST00000537824 UPK3BL1B0FP48 263 aa5.37□□□□□ -1.55
CSMD1-215ENST00000537824 UPK3BL2E5RIL1 263 aa5.37□□□□□ -1.55
CSMD1-215ENST00000537824 MGST1P10620 155 aaKnown RBP5.37□□□□□ -1.55
CSMD1-215ENST00000537824 ELK1P19419 428 aa5.37□□□□□ -1.55
CSMD1-215ENST00000537824 ADAM5Q6NVV9 412 aa5.37□□□□□ -1.55
CSMD1-215ENST00000537824 THOC6Q86W42 341 aaKnown RBP5.37□□□□□ -1.55
CSMD1-215ENST00000537824 OR51L1Q8NGJ5 315 aa5.37□□□□□ -1.55
CSMD1-215ENST00000537824 SCARB1Q8WTV0 552 aa5.37□□□□□ -1.55
CSMD1-215ENST00000537824 RBM18Q96H35 190 aaKnown RBP5.37□□□□□ -1.55
CSMD1-215ENST00000537824 KCNH6Q9H252 994 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms