RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 NR4A3Q92570 626 aa4.72□□□□□ -1.65
AMBRA1-209ENST00000529963 HAS2Q92819 552 aa4.72□□□□□ -1.65
AMBRA1-209ENST00000529963 PEX13Q92968 403 aa4.72□□□□□ -1.65
AMBRA1-209ENST00000529963 RAD51AP1Q96B01 352 aa4.72□□□□□ -1.65
AMBRA1-209ENST00000529963 TMEM121Q9BTD3 319 aa4.72□□□□□ -1.65
AMBRA1-209ENST00000529963 CHST11Q9NPF2 352 aa4.72□□□□□ -1.65
AMBRA1-209ENST00000529963 MRGBPQ9NV56 204 aa4.72□□□□□ -1.65
AMBRA1-209ENST00000529963 C14orf105Q9NVL8 296 aa4.72□□□□□ -1.65
AMBRA1-209ENST00000529963 SPATA7Q9P0W8 599 aa4.72□□□□□ -1.65
AMBRA1-209ENST00000529963 ABI3Q9P2A4 366 aa4.72□□□□□ -1.65
AMBRA1-209ENST00000529963 SLC2A6Q9UGQ3 507 aa4.72□□□□□ -1.65
AMBRA1-209ENST00000529963 GNPTGQ9UJJ9 305 aa4.72□□□□□ -1.65
AMBRA1-209ENST00000529963 TTC7AQ9ULT0 858 aaPredicted RBP4.72□□□□□ -1.65
AMBRA1-209ENST00000529963 CDC14AQ9UNH5 594 aa4.72□□□□□ -1.65
AMBRA1-209ENST00000529963 MRPS2Q9Y399 296 aaKnown RBP4.72□□□□□ -1.65
AMBRA1-209ENST00000529963 ADAM18Q9Y3Q7 739 aa4.72□□□□□ -1.65
AMBRA1-209ENST00000529963 KLK4Q9Y5K2 254 aa4.72□□□□□ -1.65
AMBRA1-209ENST00000529963 DOCK10Q96BY6 2186 aa4.71□□□□□ -1.65
AMBRA1-209ENST00000529963 NUP210LQ5VU65 1888 aa4.71□□□□□ -1.65
AMBRA1-209ENST00000529963 SNRNP200O75643 2136 aaKnown RBP4.71□□□□□ -1.66
AMBRA1-209ENST00000529963 RTTNQ86VV8 2226 aa4.71□□□□□ -1.66
AMBRA1-209ENST00000529963 IGLV3-12A0A075B6K2 115 aa4.71□□□□□ -1.66
AMBRA1-209ENST00000529963 TRGV8A0A0C4DH27 118 aa4.71□□□□□ -1.66
AMBRA1-209ENST00000529963 IQCF5A8MTL0 148 aa4.71□□□□□ -1.66
AMBRA1-209ENST00000529963 IDSB3KWA1 339 aa4.71□□□□□ -1.66
AMBRA1-209ENST00000529963 CCL21O00585 134 aa4.71□□□□□ -1.66
AMBRA1-209ENST00000529963 UBE2CO00762 179 aa4.71□□□□□ -1.66
AMBRA1-209ENST00000529963 PFDN6O15212 129 aa4.71□□□□□ -1.66
AMBRA1-209ENST00000529963 PAGE4O60829 102 aa4.71□□□□□ -1.66
AMBRA1-209ENST00000529963 NDUFS3O75489 264 aa4.71□□□□□ -1.66
AMBRA1-209ENST00000529963 OR2C1O95371 312 aa4.71□□□□□ -1.66
AMBRA1-209ENST00000529963 C1orf105O95561 183 aa4.71□□□□□ -1.66
AMBRA1-209ENST00000529963 HSPA4LO95757 839 aa4.71□□□□□ -1.66
AMBRA1-209ENST00000529963 IFNB1P01574 187 aa4.71□□□□□ -1.66
AMBRA1-209ENST00000529963 HEXAP06865 529 aa4.71□□□□□ -1.66
AMBRA1-209ENST00000529963 HEXBP07686 556 aa4.71□□□□□ -1.66
AMBRA1-209ENST00000529963 ANXA5P08758 320 aa4.71□□□□□ -1.66
AMBRA1-209ENST00000529963 COX6A1P12074 109 aa4.71□□□□□ -1.66
AMBRA1-209ENST00000529963 ICAM2P13598 275 aa4.71□□□□□ -1.66
AMBRA1-209ENST00000529963 RPS3P23396 243 aaKnown RBP eCLIP4.71□□□□□ -1.66
AMBRA1-209ENST00000529963 PSMB5P28074 263 aa4.71□□□□□ -1.66
AMBRA1-209ENST00000529963 STIP1P31948 543 aaKnown RBP4.71□□□□□ -1.66
AMBRA1-209ENST00000529963 ARRB2P32121 409 aa4.71□□□□□ -1.66
AMBRA1-209ENST00000529963 BDKRB1P46663 353 aa4.71□□□□□ -1.66
AMBRA1-209ENST00000529963 TDGF1P3P51864 188 aa4.71□□□□□ -1.66
AMBRA1-209ENST00000529963 EEF1A2Q05639 463 aaKnown RBP4.71□□□□□ -1.66
AMBRA1-209ENST00000529963 RBPJQ06330 500 aa4.71□□□□□ -1.66
AMBRA1-209ENST00000529963 CSTF3Q12996 717 aaKnown RBP4.71□□□□□ -1.66
AMBRA1-209ENST00000529963 GRB7Q14451 532 aa4.71□□□□□ -1.66
AMBRA1-209ENST00000529963 IRF3Q14653 427 aa4.71□□□□□ -1.66
AMBRA1-209ENST00000529963 TWIST1Q15672 202 aa4.71□□□□□ -1.66
AMBRA1-209ENST00000529963 GARNL3Q5VVW2 1013 aa4.71□□□□□ -1.66
AMBRA1-209ENST00000529963 FRMPD2BQ6IN97 320 aa4.71□□□□□ -1.66
AMBRA1-209ENST00000529963 TMEM207Q6UWW9 146 aa4.71□□□□□ -1.66
AMBRA1-209ENST00000529963 ZNF534Q76KX8 674 aa4.71□□□□□ -1.66
AMBRA1-209ENST00000529963 GSTA5Q7RTV2 222 aa4.71□□□□□ -1.66
AMBRA1-209ENST00000529963 LRRC6Q86X45 466 aa4.71□□□□□ -1.66
AMBRA1-209ENST00000529963 SYCE1Q8N0S2 351 aa4.71□□□□□ -1.66
AMBRA1-209ENST00000529963 KRT222Q8N1A0 295 aa4.71□□□□□ -1.66
AMBRA1-209ENST00000529963 OTUD6BQ8N6M0 293 aa4.71□□□□□ -1.66
AMBRA1-209ENST00000529963 OR2L3Q8NG85 312 aa4.71□□□□□ -1.66
AMBRA1-209ENST00000529963 SPATA3Q8NHX4 192 aa4.71□□□□□ -1.66
AMBRA1-209ENST00000529963 HMGCLL1Q8TB92 370 aa4.71□□□□□ -1.66
AMBRA1-209ENST00000529963 ITLN2Q8WWU7 325 aaPredicted RBP4.71□□□□□ -1.66
AMBRA1-209ENST00000529963 C8orf44Q96CB5 159 aa4.71□□□□□ -1.66
AMBRA1-209ENST00000529963 PGAM5Q96HS1 289 aa4.71□□□□□ -1.66
AMBRA1-209ENST00000529963 CABS1Q96KC9 395 aa4.71□□□□□ -1.66
AMBRA1-209ENST00000529963 LURAP1Q96LR2 239 aa4.71□□□□□ -1.66
AMBRA1-209ENST00000529963 FRMD8P1Q9BZ68 369 aaPredicted RBP4.71□□□□□ -1.66
AMBRA1-209ENST00000529963 SCPEP1Q9HB40 452 aa4.71□□□□□ -1.66
AMBRA1-209ENST00000529963 MKKSQ9NPJ1 570 aaPredicted RBP4.71□□□□□ -1.66
AMBRA1-209ENST00000529963 SLC35C2Q9NQQ7 365 aa4.71□□□□□ -1.66
AMBRA1-209ENST00000529963 UTP6Q9NYH9 597 aaKnown RBP4.71□□□□□ -1.66
AMBRA1-209ENST00000529963 TRPC4Q9UBN4 977 aa4.71□□□□□ -1.66
AMBRA1-209ENST00000529963 TEKT2Q9UIF3 430 aa4.71□□□□□ -1.66
AMBRA1-209ENST00000529963 MKLN1Q9UL63 735 aa4.71□□□□□ -1.66
AMBRA1-209ENST00000529963 R3HDM2Q9Y2K5 976 aaKnown RBP4.71□□□□□ -1.66
AMBRA1-209ENST00000529963 SESN1Q9Y6P5 492 aa4.71□□□□□ -1.66
AMBRA1-209ENST00000529963 CAPN7Q9Y6W3 813 aa4.71□□□□□ -1.66
AMBRA1-209ENST00000529963 A3GALT2U3KPV4 340 aa4.71□□□□□ -1.66
AMBRA1-209ENST00000529963 PKDREJQ9NTG1 2253 aa4.7□□□□□ -1.66
AMBRA1-209ENST00000529963 CSPG4Q6UVK1 2322 aa4.7□□□□□ -1.66
AMBRA1-209ENST00000529963 MYO7BQ6PIF6 2116 aa4.7□□□□□ -1.66
AMBRA1-209ENST00000529963 IGHV1-45A0A0A0MS14 117 aa4.7□□□□□ -1.66
AMBRA1-209ENST00000529963 A0A1W2PPV9 198 aa4.7□□□□□ -1.66
AMBRA1-209ENST00000529963 A0A1W2PQ72 361 aa4.7□□□□□ -1.66
AMBRA1-209ENST00000529963 OR2A25A4D2G3 310 aa4.7□□□□□ -1.66
AMBRA1-209ENST00000529963 A8MZ25 164 aa4.7□□□□□ -1.66
AMBRA1-209ENST00000529963 NPIPB11E5RHQ5 1161 aa4.7□□□□□ -1.66
AMBRA1-209ENST00000529963 H0YGG7 62 aa4.7□□□□□ -1.66
AMBRA1-209ENST00000529963 H3BMM5 538 aa4.7□□□□□ -1.66
AMBRA1-209ENST00000529963 AP3B1O00203 1094 aa4.7□□□□□ -1.66
AMBRA1-209ENST00000529963 TXNDC9O14530 226 aa4.7□□□□□ -1.66
AMBRA1-209ENST00000529963 ITM2AO43736 263 aa4.7□□□□□ -1.66
AMBRA1-209ENST00000529963 NADKO95544 446 aaPredicted RBP4.7□□□□□ -1.66
AMBRA1-209ENST00000529963 WDPCPO95876 746 aa4.7□□□□□ -1.66
AMBRA1-209ENST00000529963 APRTP07741 180 aa4.7□□□□□ -1.66
AMBRA1-209ENST00000529963 COX6B1P14854 86 aa4.7□□□□□ -1.66
AMBRA1-209ENST00000529963 HTR1EP28566 365 aa4.7□□□□□ -1.66
AMBRA1-209ENST00000529963 ATP5DP30049 168 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms