RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 DPY30Q9C005 99 aa11.65□□□□□ -0.54
TRAPPC4-205ENST00000525079 ENKD1Q9H0I2 346 aa11.65□□□□□ -0.54
TRAPPC4-205ENST00000525079 NKIRAS1Q9NYS0 192 aa11.65□□□□□ -0.54
TRAPPC4-205ENST00000525079 KCNE3Q9Y6H6 103 aa11.65□□□□□ -0.54
TRAPPC4-205ENST00000525079 MED12Q93074 2177 aa11.64□□□□□ -0.55
TRAPPC4-205ENST00000525079 PCNX3Q9H6A9 2034 aa11.64□□□□□ -0.55
TRAPPC4-205ENST00000525079 GOLGA8QA0A0J9YX86 632 aa11.64□□□□□ -0.55
TRAPPC4-205ENST00000525079 GOLGA8OA6NCC3 632 aa11.64□□□□□ -0.55
TRAPPC4-205ENST00000525079 HSPB2A8KAH6 182 aa11.64□□□□□ -0.55
TRAPPC4-205ENST00000525079 FAM47E-STBD1D6RA91 191 aa11.64□□□□□ -0.55
TRAPPC4-205ENST00000525079 GOLGA8NF8WBI6 632 aa11.64□□□□□ -0.55
TRAPPC4-205ENST00000525079 SDHDO14521 159 aa11.64□□□□□ -0.55
TRAPPC4-205ENST00000525079 OXSR1O95747 527 aaPredicted RBP11.64□□□□□ -0.55
TRAPPC4-205ENST00000525079 CPN1P15169 458 aa11.64□□□□□ -0.55
TRAPPC4-205ENST00000525079 BMP5P22003 454 aa11.64□□□□□ -0.55
TRAPPC4-205ENST00000525079 CEACAM8P31997 349 aaPredicted RBP11.64□□□□□ -0.55
TRAPPC4-205ENST00000525079 LHX2P50458 406 aa11.64□□□□□ -0.55
TRAPPC4-205ENST00000525079 RNF144AP50876 292 aaPredicted RBP11.64□□□□□ -0.55
TRAPPC4-205ENST00000525079 B3GALT5-AS1P59052 145 aa11.64□□□□□ -0.55
TRAPPC4-205ENST00000525079 HBA1P69905 142 aa11.64□□□□□ -0.55
TRAPPC4-205ENST00000525079 SNTB1Q13884 538 aaKnown RBP11.64□□□□□ -0.55
TRAPPC4-205ENST00000525079 RCAN2Q14206 197 aa11.64□□□□□ -0.55
TRAPPC4-205ENST00000525079 SF3B4Q15427 424 aaKnown RBP eCLIP11.64□□□□□ -0.55
TRAPPC4-205ENST00000525079 HSPB2Q16082 182 aa11.64□□□□□ -0.55
TRAPPC4-205ENST00000525079 EXOSC6Q5RKV6 272 aaKnown RBP11.64□□□□□ -0.55
TRAPPC4-205ENST00000525079 NSUN5P2Q63ZY6 315 aa11.64□□□□□ -0.55
TRAPPC4-205ENST00000525079 AAGABQ6PD74 315 aa11.64□□□□□ -0.55
TRAPPC4-205ENST00000525079 ANKRD46Q86W74 232 aa11.64□□□□□ -0.55
TRAPPC4-205ENST00000525079 UBQLNLQ8IYU4 475 aa11.64□□□□□ -0.55
TRAPPC4-205ENST00000525079 NATD1Q8N6N6 113 aa11.64□□□□□ -0.55
TRAPPC4-205ENST00000525079 C9orf106Q8NAJ2 232 aa11.64□□□□□ -0.55
TRAPPC4-205ENST00000525079 OR56A1Q8NGH5 318 aa11.64□□□□□ -0.55
TRAPPC4-205ENST00000525079 PSMA8Q8TAA3 256 aa11.64□□□□□ -0.55
TRAPPC4-205ENST00000525079 ADAMTS15Q8TE58 950 aa11.64□□□□□ -0.55
TRAPPC4-205ENST00000525079 SPOCK3Q9BQ16 436 aa11.64□□□□□ -0.55
TRAPPC4-205ENST00000525079 BTBD2Q9BX70 525 aa11.64□□□□□ -0.55
TRAPPC4-205ENST00000525079 ACTRT3Q9BYD9 372 aa11.64□□□□□ -0.55
TRAPPC4-205ENST00000525079 PIGUQ9H490 435 aa11.64□□□□□ -0.55
TRAPPC4-205ENST00000525079 WDR55Q9H6Y2 383 aaPredicted RBP11.64□□□□□ -0.55
TRAPPC4-205ENST00000525079 MANSC1Q9H8J5 431 aa11.64□□□□□ -0.55
TRAPPC4-205ENST00000525079 MEAF6Q9HAF1 191 aa11.64□□□□□ -0.55
TRAPPC4-205ENST00000525079 THAP1Q9NVV9 213 aa11.64□□□□□ -0.55
TRAPPC4-205ENST00000525079 GPATCH2Q9NW75 528 aa11.64□□□□□ -0.55
TRAPPC4-205ENST00000525079 GIN1Q9NXP7 522 aa11.64□□□□□ -0.55
TRAPPC4-205ENST00000525079 FAF1Q9UNN5 650 aaPredicted RBP11.64□□□□□ -0.55
TRAPPC4-205ENST00000525079 MRPS18CQ9Y3D5 142 aaKnown RBP11.64□□□□□ -0.55
TRAPPC4-205ENST00000525079 NPIPA5A0A0B4J1W7 369 aa11.63□□□□□ -0.55
TRAPPC4-205ENST00000525079 SHISA8B8ZZ34 492 aa11.63□□□□□ -0.55
TRAPPC4-205ENST00000525079 C9JVG2 144 aa11.63□□□□□ -0.55
TRAPPC4-205ENST00000525079 NPIPA7E9PJI5 369 aa11.63□□□□□ -0.55
TRAPPC4-205ENST00000525079 NDUFB5O43674 189 aa11.63□□□□□ -0.55
TRAPPC4-205ENST00000525079 SNNO75324 88 aaPredicted RBP11.63□□□□□ -0.55
TRAPPC4-205ENST00000525079 CPSF4O95639 269 aaKnown RBP11.63□□□□□ -0.55
TRAPPC4-205ENST00000525079 IL2RAP01589 272 aa11.63□□□□□ -0.55
TRAPPC4-205ENST00000525079 ALDOCP09972 364 aaKnown RBP11.63□□□□□ -0.55
TRAPPC4-205ENST00000525079 NPIPA8P0DM63 369 aa11.63□□□□□ -0.55
TRAPPC4-205ENST00000525079 TBXA2RP21731 343 aa11.63□□□□□ -0.55
TRAPPC4-205ENST00000525079 CHMP24386 653 aa11.63□□□□□ -0.55
TRAPPC4-205ENST00000525079 MSX1P28360 303 aa11.63□□□□□ -0.55
TRAPPC4-205ENST00000525079 EPHA3P29320 983 aa11.63□□□□□ -0.55
TRAPPC4-205ENST00000525079 TIMP3P35625 211 aa11.63□□□□□ -0.55
TRAPPC4-205ENST00000525079 ZNF136P52737 540 aa11.63□□□□□ -0.55
TRAPPC4-205ENST00000525079 SLC18A1P54219 525 aa11.63□□□□□ -0.55
TRAPPC4-205ENST00000525079 CASP9P55211 416 aa11.63□□□□□ -0.55
TRAPPC4-205ENST00000525079 CLDN18P56856 261 aa11.63□□□□□ -0.55
TRAPPC4-205ENST00000525079 C21orf58P58505 322 aa11.63□□□□□ -0.55
TRAPPC4-205ENST00000525079 RPS26P62854 115 aaKnown RBP11.63□□□□□ -0.55
TRAPPC4-205ENST00000525079 PHC1P78364 1004 aa11.63□□□□□ -0.55
TRAPPC4-205ENST00000525079 C17orf67Q0P5P2 114 aa11.63□□□□□ -0.55
TRAPPC4-205ENST00000525079 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.63□□□□□ -0.55
TRAPPC4-205ENST00000525079 AGBL2Q5U5Z8 902 aa11.63□□□□□ -0.55
TRAPPC4-205ENST00000525079 RAET1LQ5VY80 246 aa11.63□□□□□ -0.55
TRAPPC4-205ENST00000525079 ATG16L1Q676U5 607 aa11.63□□□□□ -0.55
TRAPPC4-205ENST00000525079 CDC73Q6P1J9 531 aa11.63□□□□□ -0.55
TRAPPC4-205ENST00000525079 GDF7Q7Z4P5 450 aa11.63□□□□□ -0.55
TRAPPC4-205ENST00000525079 CAMKMTQ7Z624 323 aa11.63□□□□□ -0.55
TRAPPC4-205ENST00000525079 WDR75Q8IWA0 830 aaKnown RBP11.63□□□□□ -0.55
TRAPPC4-205ENST00000525079 KIRREL3Q8IZU9 778 aa11.63□□□□□ -0.55
TRAPPC4-205ENST00000525079 RELL2Q8NC24 303 aaPredicted RBP11.63□□□□□ -0.55
TRAPPC4-205ENST00000525079 OR5D16Q8NGK9 328 aa11.63□□□□□ -0.55
TRAPPC4-205ENST00000525079 OR4A15Q8NGL6 344 aa11.63□□□□□ -0.55
TRAPPC4-205ENST00000525079 ZPLD1Q8TCW7 415 aa11.63□□□□□ -0.55
TRAPPC4-205ENST00000525079 SFXN5Q8TD22 340 aa11.63□□□□□ -0.55
TRAPPC4-205ENST00000525079 C1GALT1C1Q96EU7 318 aa11.63□□□□□ -0.55
TRAPPC4-205ENST00000525079 DTNBP1Q96EV8 351 aa11.63□□□□□ -0.55
TRAPPC4-205ENST00000525079 OR7D2Q96RA2 312 aa11.63□□□□□ -0.55
TRAPPC4-205ENST00000525079 STACQ99469 402 aa11.63□□□□□ -0.55
TRAPPC4-205ENST00000525079 G6PC3Q9BUM1 346 aa11.63□□□□□ -0.55
TRAPPC4-205ENST00000525079 PTGES2Q9H7Z7 377 aa11.63□□□□□ -0.55
TRAPPC4-205ENST00000525079 CALHM2Q9HA72 323 aa11.63□□□□□ -0.55
TRAPPC4-205ENST00000525079 ZNF337Q9Y3M9 751 aa11.63□□□□□ -0.55
TRAPPC4-205ENST00000525079 ITPR2Q14571 2701 aa11.63□□□□□ -0.55
TRAPPC4-205ENST00000525079 MBD3L4A6NDZ8 208 aaPredicted RBP11.62□□□□□ -0.55
TRAPPC4-205ENST00000525079 MBD3L3A6NE82 208 aaPredicted RBP11.62□□□□□ -0.55
TRAPPC4-205ENST00000525079 MBD3L5A6NJ08 208 aaPredicted RBP11.62□□□□□ -0.55
TRAPPC4-205ENST00000525079 CD8B2A6NJW9 211 aa11.62□□□□□ -0.55
TRAPPC4-205ENST00000525079 CLCA1A8K7I4 914 aa11.62□□□□□ -0.55
TRAPPC4-205ENST00000525079 ALG1L2C9J202 215 aa11.62□□□□□ -0.55
TRAPPC4-205ENST00000525079 H0YC42 278 aa11.62□□□□□ -0.55
TRAPPC4-205ENST00000525079 H3BML4 177 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms