RNA–Protein interactions for RNA: ENST00000525074.5

TRIM3-203, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRIM3, Length 3,044 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-203ENST00000525074 ALKAL2Q6UX46 152 aa12.31□□□□□ -0.44
TRIM3-203ENST00000525074 LRRC28Q86X40 367 aaPredicted RBP12.31□□□□□ -0.44
TRIM3-203ENST00000525074 TMEM99Q8N816 258 aa12.31□□□□□ -0.44
TRIM3-203ENST00000525074 OR10H4Q8NGA5 316 aa12.31□□□□□ -0.44
TRIM3-203ENST00000525074 LHFPL5Q8TAF8 219 aa12.31□□□□□ -0.44
TRIM3-203ENST00000525074 GANCQ8TET4 914 aa12.31□□□□□ -0.44
TRIM3-203ENST00000525074 SLC5A11Q8WWX8 675 aa12.31□□□□□ -0.44
TRIM3-203ENST00000525074 A4GALTQ9NPC4 353 aa12.31□□□□□ -0.44
TRIM3-203ENST00000525074 SIRT3Q9NTG7 399 aaPredicted RBP12.31□□□□□ -0.44
TRIM3-203ENST00000525074 H2AFY2Q9P0M6 372 aaPredicted RBP12.31□□□□□ -0.44
TRIM3-203ENST00000525074 MAB21L2Q9Y586 359 aa12.31□□□□□ -0.44
TRIM3-203ENST00000525074 PLXNB3Q9ULL4 1909 aa12.31□□□□□ -0.44
TRIM3-203ENST00000525074 A0A1W2PS29 197 aa12.31□□□□□ -0.44
TRIM3-203ENST00000525074 K7ESM1 405 aa12.31□□□□□ -0.44
TRIM3-203ENST00000525074 RNF13O43567 381 aa12.31□□□□□ -0.44
TRIM3-203ENST00000525074 ATG13O75143 517 aa12.31□□□□□ -0.44
TRIM3-203ENST00000525074 C1orf105O95561 183 aa12.31□□□□□ -0.44
TRIM3-203ENST00000525074 WNT1P04628 370 aa12.31□□□□□ -0.44
TRIM3-203ENST00000525074 H2AFB2P0C5Z0 115 aa12.31□□□□□ -0.44
TRIM3-203ENST00000525074 CCR2P41597 374 aa12.31□□□□□ -0.44
TRIM3-203ENST00000525074 ARHGDIBP52566 201 aa12.31□□□□□ -0.44
TRIM3-203ENST00000525074 EPHB3P54753 998 aa12.31□□□□□ -0.44
TRIM3-203ENST00000525074 SMIM11AP58511 58 aa12.31□□□□□ -0.44
TRIM3-203ENST00000525074 RPS7P62081 194 aaKnown RBP12.31□□□□□ -0.44
TRIM3-203ENST00000525074 MESP2Q0VG99 397 aa12.31□□□□□ -0.44
TRIM3-203ENST00000525074 TMEM115Q12893 351 aaPredicted RBP12.31□□□□□ -0.44
TRIM3-203ENST00000525074 DSG2Q14126 1118 aa12.31□□□□□ -0.44
TRIM3-203ENST00000525074 STK11Q15831 433 aa12.31□□□□□ -0.44
TRIM3-203ENST00000525074 C1orf94Q6P1W5 598 aa12.31□□□□□ -0.44
TRIM3-203ENST00000525074 SFXN4Q6P4A7 337 aa12.31□□□□□ -0.44
TRIM3-203ENST00000525074 ZNF322Q6U7Q0 402 aaPredicted RBP12.31□□□□□ -0.44
TRIM3-203ENST00000525074 ZNF783Q6ZMS7 281 aa12.31□□□□□ -0.44
TRIM3-203ENST00000525074 Q6ZTK2 550 aa12.31□□□□□ -0.44
TRIM3-203ENST00000525074 CEACAM19Q7Z692 300 aa12.31□□□□□ -0.44
TRIM3-203ENST00000525074 NKAIN4Q8IVV8 208 aa12.31□□□□□ -0.44
TRIM3-203ENST00000525074 OR6M1Q8NGM8 313 aa12.31□□□□□ -0.44
TRIM3-203ENST00000525074 ORAI1Q96D31 301 aa12.31□□□□□ -0.44
TRIM3-203ENST00000525074 LYSMD1Q96S90 227 aa12.31□□□□□ -0.44
TRIM3-203ENST00000525074 OR10A4Q9H209 315 aa12.31□□□□□ -0.44
TRIM3-203ENST00000525074 MRPL17Q9NRX2 175 aaKnown RBP12.31□□□□□ -0.44
TRIM3-203ENST00000525074 CHURC1-FNTBB4DL54 471 aa12.3□□□□□ -0.44
TRIM3-203ENST00000525074 EFCAB14O75071 495 aa12.3□□□□□ -0.44
TRIM3-203ENST00000525074 LEFTY1O75610 366 aa12.3□□□□□ -0.44
TRIM3-203ENST00000525074 PPM1BO75688 479 aa12.3□□□□□ -0.44
TRIM3-203ENST00000525074 CHRM4P08173 479 aa12.3□□□□□ -0.44
TRIM3-203ENST00000525074 MAPK8P45983 427 aa12.3□□□□□ -0.44
TRIM3-203ENST00000525074 SREBF2Q12772 1141 aa12.3□□□□□ -0.44
TRIM3-203ENST00000525074 GSG1Q2KHT4 349 aa12.3□□□□□ -0.44
TRIM3-203ENST00000525074 OAFQ86UD1 273 aa12.3□□□□□ -0.44
TRIM3-203ENST00000525074 C16orf58Q96GQ5 468 aa12.3□□□□□ -0.44
TRIM3-203ENST00000525074 KLHL15Q96M94 604 aa12.3□□□□□ -0.44
TRIM3-203ENST00000525074 TRMT61BQ9BVS5 477 aaKnown RBP12.3□□□□□ -0.44
TRIM3-203ENST00000525074 SLC46A2Q9BY10 475 aa12.3□□□□□ -0.44
TRIM3-203ENST00000525074 SLC7A5P2Q9GIP4 190 aa12.3□□□□□ -0.44
TRIM3-203ENST00000525074 PPA2Q9H2U2 334 aa12.3□□□□□ -0.44
TRIM3-203ENST00000525074 HINT3Q9NQE9 182 aaKnown RBP12.3□□□□□ -0.44
TRIM3-203ENST00000525074 SEMA4GQ9NTN9 838 aa12.3□□□□□ -0.44
TRIM3-203ENST00000525074 CUEDC1Q9NWM3 386 aaPredicted RBP12.3□□□□□ -0.44
TRIM3-203ENST00000525074 CXXC1Q9P0U4 656 aaPredicted RBP12.3□□□□□ -0.44
TRIM3-203ENST00000525074 AUP1Q9Y679 476 aa12.3□□□□□ -0.44
TRIM3-203ENST00000525074 ZNF593O00488 134 aaPredicted RBP12.3□□□□□ -0.44
TRIM3-203ENST00000525074 RGS9O75916 674 aaPredicted RBP12.3□□□□□ -0.44
TRIM3-203ENST00000525074 SOX30O94993 753 aa12.3□□□□□ -0.44
TRIM3-203ENST00000525074 PTHLHP12272 177 aa12.3□□□□□ -0.44
TRIM3-203ENST00000525074 PSMB5P28074 263 aa12.3□□□□□ -0.44
TRIM3-203ENST00000525074 LCN1P31025 176 aa12.3□□□□□ -0.44
TRIM3-203ENST00000525074 BLVRAP53004 296 aa12.3□□□□□ -0.44
TRIM3-203ENST00000525074 ZNF33BQ06732 778 aa12.3□□□□□ -0.44
TRIM3-203ENST00000525074 FZD5Q13467 585 aa12.3□□□□□ -0.44
TRIM3-203ENST00000525074 HBMQ6B0K9 141 aa12.3□□□□□ -0.44
TRIM3-203ENST00000525074 NXPE4Q6UWF7 544 aa12.3□□□□□ -0.44
TRIM3-203ENST00000525074 RASSF6Q6ZTQ3 369 aa12.3□□□□□ -0.44
TRIM3-203ENST00000525074 NLRC3Q7RTR2 1065 aa12.3□□□□□ -0.44
TRIM3-203ENST00000525074 SLC9B2Q86UD5 537 aa12.3□□□□□ -0.44
TRIM3-203ENST00000525074 VRK2Q86Y07 508 aa12.3□□□□□ -0.44
TRIM3-203ENST00000525074 IL17RCQ8NAC3 791 aa12.3□□□□□ -0.44
TRIM3-203ENST00000525074 THAP4Q8WY91 577 aa12.3□□□□□ -0.44
TRIM3-203ENST00000525074 MARVELD3Q96A59 401 aa12.3□□□□□ -0.44
TRIM3-203ENST00000525074 ELMOD3Q96FG2 381 aa12.3□□□□□ -0.44
TRIM3-203ENST00000525074 SFXN2Q96NB2 322 aa12.3□□□□□ -0.44
TRIM3-203ENST00000525074 EFCAB11Q9BUY7 163 aa12.3□□□□□ -0.44
TRIM3-203ENST00000525074 SDHAF2Q9NX18 166 aa12.3□□□□□ -0.44
TRIM3-203ENST00000525074 CEP290O15078 2479 aa12.3□□□□□ -0.44
TRIM3-203ENST00000525074 A0A1W2PRG6 482 aa12.29□□□□□ -0.44
TRIM3-203ENST00000525074 ABLIM3O94929 683 aa12.29□□□□□ -0.44
TRIM3-203ENST00000525074 CST5P28325 142 aaPredicted RBP12.29□□□□□ -0.44
TRIM3-203ENST00000525074 RPL3P39023 403 aaKnown RBP12.29□□□□□ -0.44
TRIM3-203ENST00000525074 MAPK9P45984 424 aa12.29□□□□□ -0.44
TRIM3-203ENST00000525074 CLDN2P57739 230 aa12.29□□□□□ -0.44
TRIM3-203ENST00000525074 NTHL1P78549 312 aa12.29□□□□□ -0.44
TRIM3-203ENST00000525074 CD276Q5ZPR3 534 aa12.29□□□□□ -0.44
TRIM3-203ENST00000525074 GPAT4Q86UL3 456 aa12.29□□□□□ -0.44
TRIM3-203ENST00000525074 NRMQ8IXM6 262 aa12.29□□□□□ -0.44
TRIM3-203ENST00000525074 C17orf47Q8NEP4 570 aa12.29□□□□□ -0.44
TRIM3-203ENST00000525074 TM4SF18Q96CE8 201 aa12.29□□□□□ -0.44
TRIM3-203ENST00000525074 METTL2AQ96IZ6 378 aaKnown RBP12.29□□□□□ -0.44
TRIM3-203ENST00000525074 SLC35G5Q96KT7 338 aa12.29□□□□□ -0.44
TRIM3-203ENST00000525074 SEC22CQ9BRL7 303 aa12.29□□□□□ -0.44
TRIM3-203ENST00000525074 HCAR1Q9BXC0 346 aa12.29□□□□□ -0.44
TRIM3-203ENST00000525074 OR51V1Q9H2C8 321 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms