RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 SCO2O43819 266 aa13.02□□□□□ -0.32
SYNPO-205ENST00000522122 PEX11BO96011 259 aa13.02□□□□□ -0.32
SYNPO-205ENST00000522122 KLK3P07288 261 aaPredicted RBP13.02□□□□□ -0.32
SYNPO-205ENST00000522122 PVALBP20472 110 aaPredicted RBP13.02□□□□□ -0.32
SYNPO-205ENST00000522122 ITGB7P26010 798 aa13.02□□□□□ -0.32
SYNPO-205ENST00000522122 CERS1P27544 350 aa13.02□□□□□ -0.32
SYNPO-205ENST00000522122 NTSR1P30989 418 aa13.02□□□□□ -0.32
SYNPO-205ENST00000522122 BMPR1AP36894 532 aa13.02□□□□□ -0.32
SYNPO-205ENST00000522122 SNRPD2P62316 118 aaKnown RBP13.02□□□□□ -0.32
SYNPO-205ENST00000522122 OCLNQ16625 522 aa13.02□□□□□ -0.32
SYNPO-205ENST00000522122 HNRNPA1L2Q32P51 320 aaKnown RBP13.02□□□□□ -0.32
SYNPO-205ENST00000522122 ATAD3CQ5T2N8 411 aa13.02□□□□□ -0.32
SYNPO-205ENST00000522122 BCL2L15Q5TBC7 163 aa13.02□□□□□ -0.32
SYNPO-205ENST00000522122 SLC39A5Q6ZMH5 540 aa13.02□□□□□ -0.32
SYNPO-205ENST00000522122 OR51L1Q8NGJ5 315 aa13.02□□□□□ -0.32
SYNPO-205ENST00000522122 TRMT10AQ8TBZ6 339 aaKnown RBP13.02□□□□□ -0.32
SYNPO-205ENST00000522122 SLC46A2Q9BY10 475 aa13.02□□□□□ -0.32
SYNPO-205ENST00000522122 MMP28Q9H239 520 aa13.02□□□□□ -0.32
SYNPO-205ENST00000522122 CWH43Q9H720 699 aa13.02□□□□□ -0.32
SYNPO-205ENST00000522122 ASB4Q9Y574 426 aa13.02□□□□□ -0.32
SYNPO-205ENST00000522122 CLEC3AO75596 197 aa13.02□□□□□ -0.32
SYNPO-205ENST00000522122 NDUFB2O95178 105 aa13.02□□□□□ -0.32
SYNPO-205ENST00000522122 DRD5P21918 477 aa13.02□□□□□ -0.32
SYNPO-205ENST00000522122 TMEM173Q86WV6 379 aaPredicted RBP13.02□□□□□ -0.32
SYNPO-205ENST00000522122 ACOT4Q8N9L9 421 aa13.02□□□□□ -0.32
SYNPO-205ENST00000522122 TOR1AIP2Q8NFQ8 470 aa13.02□□□□□ -0.32
SYNPO-205ENST00000522122 DYNC2LI1Q8TCX1 351 aa13.02□□□□□ -0.32
SYNPO-205ENST00000522122 SAP130Q9H0E3 1048 aa13.02□□□□□ -0.32
SYNPO-205ENST00000522122 SLC25A37Q9NYZ2 338 aa13.02□□□□□ -0.32
SYNPO-205ENST00000522122 C19orf25Q9UFG5 118 aaPredicted RBP13.02□□□□□ -0.32
SYNPO-205ENST00000522122 SLC7A7Q9UM01 511 aa13.02□□□□□ -0.32
SYNPO-205ENST00000522122 PLCL2Q9UPR0 1127 aa13.02□□□□□ -0.32
SYNPO-205ENST00000522122 ASB1Q9Y576 335 aa13.02□□□□□ -0.32
SYNPO-205ENST00000522122 A0A1B0GTL3 188 aa13.02□□□□□ -0.33
SYNPO-205ENST00000522122 ADAMTS4O75173 837 aa13.02□□□□□ -0.33
SYNPO-205ENST00000522122 C1orf105O95561 183 aa13.02□□□□□ -0.33
SYNPO-205ENST00000522122 APBB3O95704 486 aa13.02□□□□□ -0.33
SYNPO-205ENST00000522122 PGCP20142 388 aa13.02□□□□□ -0.33
SYNPO-205ENST00000522122 HOXC12P31275 282 aa13.02□□□□□ -0.33
SYNPO-205ENST00000522122 TNFSF8P32971 234 aa13.02□□□□□ -0.33
SYNPO-205ENST00000522122 PGFP49763 221 aa13.02□□□□□ -0.33
SYNPO-205ENST00000522122 PLCXD2Q0VAA5 305 aa13.02□□□□□ -0.33
SYNPO-205ENST00000522122 CDC20Q12834 499 aa13.02□□□□□ -0.33
SYNPO-205ENST00000522122 ZNF283Q8N7M2 679 aa13.02□□□□□ -0.33
SYNPO-205ENST00000522122 LSM14AQ8ND56 463 aaKnown RBP13.02□□□□□ -0.33
SYNPO-205ENST00000522122 OR9A2Q8NGT5 310 aa13.02□□□□□ -0.33
SYNPO-205ENST00000522122 DNAJA3Q96EY1 480 aa13.02□□□□□ -0.33
SYNPO-205ENST00000522122 OSGIN1Q9UJX0 560 aa13.02□□□□□ -0.33
SYNPO-205ENST00000522122 GPR34Q9UPC5 381 aa13.02□□□□□ -0.33
SYNPO-205ENST00000522122 F5H0A9 414 aaPredicted RBP13.02□□□□□ -0.33
SYNPO-205ENST00000522122 ITGBL1O95965 494 aaPredicted RBP13.02□□□□□ -0.33
SYNPO-205ENST00000522122 ZNF806P0C7X5 589 aa13.02□□□□□ -0.33
SYNPO-205ENST00000522122 ARAFP10398 606 aa13.02□□□□□ -0.33
SYNPO-205ENST00000522122 PITPNBP48739 271 aa13.02□□□□□ -0.33
SYNPO-205ENST00000522122 SLC7A9P82251 487 aa13.02□□□□□ -0.33
SYNPO-205ENST00000522122 PTPRRQ15256 657 aa13.02□□□□□ -0.33
SYNPO-205ENST00000522122 ANKRD54Q6NXT1 300 aa13.02□□□□□ -0.33
SYNPO-205ENST00000522122 ZNF767PQ75MW2 155 aa13.02□□□□□ -0.33
SYNPO-205ENST00000522122 TMPRSS9Q7Z410 1059 aa13.02□□□□□ -0.33
SYNPO-205ENST00000522122 GPAT4Q86UL3 456 aa13.02□□□□□ -0.33
SYNPO-205ENST00000522122 KLHDC8BQ8IXV7 354 aa13.02□□□□□ -0.33
SYNPO-205ENST00000522122 CCDC54Q8NEL0 328 aa13.02□□□□□ -0.33
SYNPO-205ENST00000522122 CREB3L4Q8TEY5 395 aa13.02□□□□□ -0.33
SYNPO-205ENST00000522122 VNN3Q9NY84 501 aa13.02□□□□□ -0.33
SYNPO-205ENST00000522122 TAS2R8Q9NYW2 309 aa13.02□□□□□ -0.33
SYNPO-205ENST00000522122 NDRG4Q9ULP0 352 aaKnown RBP13.02□□□□□ -0.33
SYNPO-205ENST00000522122 CTDSP2O14595 271 aa13.01□□□□□ -0.33
SYNPO-205ENST00000522122 GLP1RP43220 463 aa13.01□□□□□ -0.33
SYNPO-205ENST00000522122 GIPRP48546 466 aa13.01□□□□□ -0.33
SYNPO-205ENST00000522122 PRLHRP49683 370 aa13.01□□□□□ -0.33
SYNPO-205ENST00000522122 GXYLT1Q4G148 440 aa13.01□□□□□ -0.33
SYNPO-205ENST00000522122 FAM219BQ5XKK7 198 aa13.01□□□□□ -0.33
SYNPO-205ENST00000522122 PARS2Q7L3T8 475 aaKnown RBP13.01□□□□□ -0.33
SYNPO-205ENST00000522122 NOXA1Q86UR1 476 aa13.01□□□□□ -0.33
SYNPO-205ENST00000522122 LILRB4Q8NHJ6 448 aa13.01□□□□□ -0.33
SYNPO-205ENST00000522122 DEDD2Q8WXF8 326 aa13.01□□□□□ -0.33
SYNPO-205ENST00000522122 ACOT11Q8WXI4 607 aaPredicted RBP13.01□□□□□ -0.33
SYNPO-205ENST00000522122 ZFYVE21Q9BQ24 234 aa13.01□□□□□ -0.33
SYNPO-205ENST00000522122 PITHD1Q9GZP4 211 aaPredicted RBP13.01□□□□□ -0.33
SYNPO-205ENST00000522122 ZNF350Q9GZX5 532 aa13.01□□□□□ -0.33
SYNPO-205ENST00000522122 IL23AQ9NPF7 189 aa13.01□□□□□ -0.33
SYNPO-205ENST00000522122 TAS2R3Q9NYW6 316 aa13.01□□□□□ -0.33
SYNPO-205ENST00000522122 COL4A5P29400 1685 aa13.01□□□□□ -0.33
SYNPO-205ENST00000522122 PPP1R3DO95685 299 aa13.01□□□□□ -0.33
SYNPO-205ENST00000522122 MAS1P04201 325 aa13.01□□□□□ -0.33
SYNPO-205ENST00000522122 HLA-FP30511 346 aa13.01□□□□□ -0.33
SYNPO-205ENST00000522122 RBMXP38159 391 aaKnown RBP13.01□□□□□ -0.33
SYNPO-205ENST00000522122 LIPAP38571 399 aa13.01□□□□□ -0.33
SYNPO-205ENST00000522122 RIDAP52758 137 aaKnown RBP13.01□□□□□ -0.33
SYNPO-205ENST00000522122 DSC1Q08554 894 aa13.01□□□□□ -0.33
SYNPO-205ENST00000522122 COL9A2Q14055 689 aaPredicted RBP13.01□□□□□ -0.33
SYNPO-205ENST00000522122 Q6ZPB1 254 aaPredicted RBP13.01□□□□□ -0.33
SYNPO-205ENST00000522122 Q8N9G6 341 aaPredicted RBP13.01□□□□□ -0.33
SYNPO-205ENST00000522122 MSLNLQ96KJ4 702 aa13.01□□□□□ -0.33
SYNPO-205ENST00000522122 ZNF700Q9H0M5 742 aa13.01□□□□□ -0.33
SYNPO-205ENST00000522122 HCFC1R1Q9NWW0 138 aa13.01□□□□□ -0.33
SYNPO-205ENST00000522122 CCDC85CA6NKD9 419 aa13.01□□□□□ -0.33
SYNPO-205ENST00000522122 OR52A4PA6NMU1 304 aa13.01□□□□□ -0.33
SYNPO-205ENST00000522122 H0YIV9 168 aa13.01□□□□□ -0.33
SYNPO-205ENST00000522122 VNN2O95498 520 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms