RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 SDCCAG3Q96C92 435 aa18.77■□□□□ 0.6
TRIM35-203ENST00000521253 MARK4Q96L34 752 aa18.77■□□□□ 0.6
TRIM35-203ENST00000521253 TTYH2Q9BSA4 534 aa18.77■□□□□ 0.6
TRIM35-203ENST00000521253 TBL1XR1Q9BZK7 514 aa18.77■□□□□ 0.6
TRIM35-203ENST00000521253 DSN1Q9H410 356 aa18.77■□□□□ 0.6
TRIM35-203ENST00000521253 SDHAF3Q9NRP4 125 aa18.77■□□□□ 0.6
TRIM35-203ENST00000521253 COQ3Q9NZJ6 369 aa18.77■□□□□ 0.6
TRIM35-203ENST00000521253 DKKL1Q9UK85 242 aa18.77■□□□□ 0.6
TRIM35-203ENST00000521253 PCDHGB4Q9UN71 923 aa18.77■□□□□ 0.6
TRIM35-203ENST00000521253 RNF103-CHMP3A0A140T963 221 aa18.76■□□□□ 0.59
TRIM35-203ENST00000521253 DIAPH2O60879 1101 aa18.76■□□□□ 0.59
TRIM35-203ENST00000521253 CLDN14O95500 239 aa18.76■□□□□ 0.59
TRIM35-203ENST00000521253 CPSF4O95639 269 aaKnown RBP18.76■□□□□ 0.59
TRIM35-203ENST00000521253 ANGPTL1O95841 491 aa18.76■□□□□ 0.59
TRIM35-203ENST00000521253 HOXD4P09016 255 aaPredicted RBP18.76■□□□□ 0.59
TRIM35-203ENST00000521253 GLI4P10075 376 aa18.76■□□□□ 0.59
TRIM35-203ENST00000521253 DPP4P27487 766 aa18.76■□□□□ 0.59
TRIM35-203ENST00000521253 HTR1EP28566 365 aa18.76■□□□□ 0.59
TRIM35-203ENST00000521253 GRNP28799 593 aaKnown RBP18.76■□□□□ 0.59
TRIM35-203ENST00000521253 S100A3P33764 101 aa18.76■□□□□ 0.59
TRIM35-203ENST00000521253 DGKQP52824 942 aa18.76■□□□□ 0.59
TRIM35-203ENST00000521253 RPS26P62854 115 aaKnown RBP18.76■□□□□ 0.59
TRIM35-203ENST00000521253 ACAD11Q709F0 780 aa18.76■□□□□ 0.59
TRIM35-203ENST00000521253 C6orf120Q7Z4R8 191 aa18.76■□□□□ 0.59
TRIM35-203ENST00000521253 OR2M3Q8NG83 312 aa18.76■□□□□ 0.59
TRIM35-203ENST00000521253 G6PC3Q9BUM1 346 aa18.76■□□□□ 0.59
TRIM35-203ENST00000521253 PRDM14Q9GZV8 571 aa18.76■□□□□ 0.59
TRIM35-203ENST00000521253 SERHL2Q9H4I8 314 aa18.76■□□□□ 0.59
TRIM35-203ENST00000521253 INTS9Q9NV88 658 aaKnown RBP18.76■□□□□ 0.59
TRIM35-203ENST00000521253 MED11Q9P086 117 aa18.76■□□□□ 0.59
TRIM35-203ENST00000521253 RNF6Q9Y252 685 aa18.76■□□□□ 0.59
TRIM35-203ENST00000521253 MRPS18CQ9Y3D5 142 aaKnown RBP18.76■□□□□ 0.59
TRIM35-203ENST00000521253 KCNE3Q9Y6H6 103 aa18.76■□□□□ 0.59
TRIM35-203ENST00000521253 FREM3P0C091 2139 aa18.76■□□□□ 0.59
TRIM35-203ENST00000521253 MAST4O15021 2626 aa18.75■□□□□ 0.59
TRIM35-203ENST00000521253 NUP214P35658 2090 aaPredicted RBP18.75■□□□□ 0.59
TRIM35-203ENST00000521253 ALG1L2C9J202 215 aa18.75■□□□□ 0.59
TRIM35-203ENST00000521253 ZIC3O60481 467 aa18.75■□□□□ 0.59
TRIM35-203ENST00000521253 OXSR1O95747 527 aaPredicted RBP18.75■□□□□ 0.59
TRIM35-203ENST00000521253 ACTL6AO96019 429 aa18.75■□□□□ 0.59
TRIM35-203ENST00000521253 NGFRP08138 427 aa18.75■□□□□ 0.59
TRIM35-203ENST00000521253 IDO1P14902 403 aa18.75■□□□□ 0.59
TRIM35-203ENST00000521253 TBXA2RP21731 343 aa18.75■□□□□ 0.59
TRIM35-203ENST00000521253 TCEA1P23193 301 aaKnown RBP18.75■□□□□ 0.59
TRIM35-203ENST00000521253 GCKP35557 465 aa18.75■□□□□ 0.59
TRIM35-203ENST00000521253 DCTP40126 519 aa18.75■□□□□ 0.59
TRIM35-203ENST00000521253 GFRA1P56159 465 aa18.75■□□□□ 0.59
TRIM35-203ENST00000521253 DSCR4P56555 118 aaPredicted RBP18.75■□□□□ 0.59
TRIM35-203ENST00000521253 ZNF630Q2M218 657 aaPredicted RBP18.75■□□□□ 0.59
TRIM35-203ENST00000521253 PDCD4Q53EL6 469 aaKnown RBP18.75■□□□□ 0.59
TRIM35-203ENST00000521253 ZNF787Q6DD87 383 aa18.75■□□□□ 0.59
TRIM35-203ENST00000521253 EPGNQ6UW88 154 aa18.75■□□□□ 0.59
TRIM35-203ENST00000521253 IFNEQ86WN2 208 aa18.75■□□□□ 0.59
TRIM35-203ENST00000521253 CCDC71Q8IV32 467 aaPredicted RBP18.75■□□□□ 0.59
TRIM35-203ENST00000521253 PM20D2Q8IYS1 436 aa18.75■□□□□ 0.59
TRIM35-203ENST00000521253 OR5D16Q8NGK9 328 aa18.75■□□□□ 0.59
TRIM35-203ENST00000521253 DTNBP1Q96EV8 351 aa18.75■□□□□ 0.59
TRIM35-203ENST00000521253 WDYHV1Q96HA8 205 aa18.75■□□□□ 0.59
TRIM35-203ENST00000521253 OR7D2Q96RA2 312 aa18.75■□□□□ 0.59
TRIM35-203ENST00000521253 ZBTB18Q99592 522 aa18.75■□□□□ 0.59
TRIM35-203ENST00000521253 CAMK2AQ9UQM7 478 aa18.75■□□□□ 0.59
TRIM35-203ENST00000521253 AHRRA9YTQ3 701 aa18.74■□□□□ 0.59
TRIM35-203ENST00000521253 SOX30O94993 753 aa18.74■□□□□ 0.59
TRIM35-203ENST00000521253 PGRP06401 933 aa18.74■□□□□ 0.59
TRIM35-203ENST00000521253 LCN1P31025 176 aa18.74■□□□□ 0.59
TRIM35-203ENST00000521253 PTGER4P35408 488 aa18.74■□□□□ 0.59
TRIM35-203ENST00000521253 C17orf67Q0P5P2 114 aa18.74■□□□□ 0.59
TRIM35-203ENST00000521253 DCST2Q5T1A1 773 aa18.74■□□□□ 0.59
TRIM35-203ENST00000521253 CA5BP1Q8WTZ4 195 aa18.74■□□□□ 0.59
TRIM35-203ENST00000521253 SLC35G5Q96KT7 338 aa18.74■□□□□ 0.59
TRIM35-203ENST00000521253 CCDC115Q96NT0 180 aa18.74■□□□□ 0.59
TRIM35-203ENST00000521253 UBQLN4Q9NRR5 601 aa18.74■□□□□ 0.59
TRIM35-203ENST00000521253 ZNF446Q9NWS9 450 aa18.74■□□□□ 0.59
TRIM35-203ENST00000521253 BTNL2Q9UIR0 455 aa18.74■□□□□ 0.59
TRIM35-203ENST00000521253 RPH3AQ9Y2J0 694 aaPredicted RBP18.74■□□□□ 0.59
TRIM35-203ENST00000521253 MED12Q93074 2177 aa18.74■□□□□ 0.59
TRIM35-203ENST00000521253 IGLV3-32A0A0A0MS00 114 aa18.73■□□□□ 0.59
TRIM35-203ENST00000521253 UBDO15205 165 aa18.73■□□□□ 0.59
TRIM35-203ENST00000521253 SLC22A3O75751 556 aa18.73■□□□□ 0.59
TRIM35-203ENST00000521253 MATN1P21941 496 aa18.73■□□□□ 0.59
TRIM35-203ENST00000521253 UQCRC2P22695 453 aa18.73■□□□□ 0.59
TRIM35-203ENST00000521253 CHRNB4P30926 498 aa18.73■□□□□ 0.59
TRIM35-203ENST00000521253 ADH7P40394 386 aa18.73■□□□□ 0.59
TRIM35-203ENST00000521253 GSTA3Q16772 222 aa18.73■□□□□ 0.59
TRIM35-203ENST00000521253 ACSF3Q4G176 576 aaPredicted RBP18.73■□□□□ 0.59
TRIM35-203ENST00000521253 SP5Q6BEB4 398 aaPredicted RBP18.73■□□□□ 0.59
TRIM35-203ENST00000521253 SEM1Q6ZVN7 128 aa18.73■□□□□ 0.59
TRIM35-203ENST00000521253 GATSQ8NAP1 163 aa18.73■□□□□ 0.59
TRIM35-203ENST00000521253 GLB1L3Q8NCI6 653 aaPredicted RBP18.73■□□□□ 0.59
TRIM35-203ENST00000521253 OR10Q1Q8NGQ4 319 aa18.73■□□□□ 0.59
TRIM35-203ENST00000521253 GOT1L1Q8NHS2 421 aaPredicted RBP18.73■□□□□ 0.59
TRIM35-203ENST00000521253 CKAP2Q8WWK9 683 aa18.73■□□□□ 0.59
TRIM35-203ENST00000521253 ASB5Q8WWX0 329 aa18.73■□□□□ 0.59
TRIM35-203ENST00000521253 SFXN2Q96NB2 322 aa18.73■□□□□ 0.59
TRIM35-203ENST00000521253 SDR39U1Q9NRG7 319 aaPredicted RBP18.73■□□□□ 0.59
TRIM35-203ENST00000521253 A0A0G2JNJ9 132 aa18.72■□□□□ 0.59
TRIM35-203ENST00000521253 KDM4EB2RXH2 506 aaPredicted RBP18.72■□□□□ 0.59
TRIM35-203ENST00000521253 NDUFB5O43674 189 aa18.72■□□□□ 0.59
TRIM35-203ENST00000521253 TGDSO95455 350 aa18.72■□□□□ 0.59
TRIM35-203ENST00000521253 HPGDP15428 266 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms