RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 MSX2P35548 267 aaPredicted RBP9.05□□□□□ -0.96
CLN8-202ENST00000517514 DCTP40126 519 aa9.05□□□□□ -0.96
CLN8-202ENST00000517514 MNAT1P51948 309 aa9.05□□□□□ -0.96
CLN8-202ENST00000517514 ATP12AP54707 1039 aa9.05□□□□□ -0.96
CLN8-202ENST00000517514 EEFSECP57772 596 aaKnown RBP9.05□□□□□ -0.96
CLN8-202ENST00000517514 ARG2P78540 354 aa9.05□□□□□ -0.96
CLN8-202ENST00000517514 CDK6Q00534 326 aa9.05□□□□□ -0.96
CLN8-202ENST00000517514 OC90Q02509 493 aaPredicted RBP9.05□□□□□ -0.96
CLN8-202ENST00000517514 RBBP4Q09028 425 aa9.05□□□□□ -0.96
CLN8-202ENST00000517514 FOXO1Q12778 655 aa9.05□□□□□ -0.96
CLN8-202ENST00000517514 SCARB2Q14108 478 aa9.05□□□□□ -0.96
CLN8-202ENST00000517514 CD226Q15762 336 aa9.05□□□□□ -0.96
CLN8-202ENST00000517514 ZNF141Q15928 474 aa9.05□□□□□ -0.96
CLN8-202ENST00000517514 VMACQ2NL98 169 aa9.05□□□□□ -0.96
CLN8-202ENST00000517514 PLEKHN1Q494U1 663 aaPredicted RBP9.05□□□□□ -0.96
CLN8-202ENST00000517514 GPAT3Q53EU6 434 aa9.05□□□□□ -0.96
CLN8-202ENST00000517514 KLHL26Q53HC5 615 aa9.05□□□□□ -0.96
CLN8-202ENST00000517514 COLEC12Q5KU26 742 aa9.05□□□□□ -0.96
CLN8-202ENST00000517514 ATAD3BQ5T9A4 648 aa9.05□□□□□ -0.96
CLN8-202ENST00000517514 PRAMEF20Q5VT98 475 aa9.05□□□□□ -0.96
CLN8-202ENST00000517514 SLC25A25Q6KCM7 469 aa9.05□□□□□ -0.96
CLN8-202ENST00000517514 PGM2L1Q6PCE3 622 aa9.05□□□□□ -0.96
CLN8-202ENST00000517514 BNC2Q6ZN30 1099 aaPredicted RBP9.05□□□□□ -0.96
CLN8-202ENST00000517514 ASB18Q6ZVZ8 466 aa9.05□□□□□ -0.96
CLN8-202ENST00000517514 C16orf62Q7Z3J2 963 aa9.05□□□□□ -0.96
CLN8-202ENST00000517514 ARPINQ7Z6K5 226 aa9.05□□□□□ -0.96
CLN8-202ENST00000517514 LSRQ86X29 649 aaPredicted RBP9.05□□□□□ -0.96
CLN8-202ENST00000517514 MICU2Q8IYU8 434 aa9.05□□□□□ -0.96
CLN8-202ENST00000517514 DND1Q8IYX4 353 aaKnown RBP9.05□□□□□ -0.96
CLN8-202ENST00000517514 FBXW8Q8N3Y1 598 aa9.05□□□□□ -0.96
CLN8-202ENST00000517514 Q8NA96 180 aa9.05□□□□□ -0.96
CLN8-202ENST00000517514 PSD4Q8NDX1 1056 aa9.05□□□□□ -0.96
CLN8-202ENST00000517514 FAM13CQ8NE31 585 aa9.05□□□□□ -0.96
CLN8-202ENST00000517514 C9orf43Q8TAL5 461 aaPredicted RBP9.05□□□□□ -0.96
CLN8-202ENST00000517514 ZNF524Q96C55 264 aa9.05□□□□□ -0.96
CLN8-202ENST00000517514 REXO5Q96IC2 774 aaKnown RBP9.05□□□□□ -0.96
CLN8-202ENST00000517514 SGCZQ96LD1 299 aa9.05□□□□□ -0.96
CLN8-202ENST00000517514 FRMD6Q96NE9 622 aa9.05□□□□□ -0.96
CLN8-202ENST00000517514 BBC3Q96PG8 261 aaPredicted RBP9.05□□□□□ -0.96
CLN8-202ENST00000517514 SH3GL1Q99961 368 aa9.05□□□□□ -0.96
CLN8-202ENST00000517514 ECSITQ9BQ95 431 aa9.05□□□□□ -0.96
CLN8-202ENST00000517514 CADM1Q9BY67 442 aaKnown RBP9.05□□□□□ -0.96
CLN8-202ENST00000517514 ANGPTL4Q9BY76 406 aa9.05□□□□□ -0.96
CLN8-202ENST00000517514 MFRPQ9BY79 579 aa9.05□□□□□ -0.96
CLN8-202ENST00000517514 GALNT9Q9HCQ5 603 aa9.05□□□□□ -0.96
CLN8-202ENST00000517514 SPAG4Q9NPE6 437 aa9.05□□□□□ -0.96
CLN8-202ENST00000517514 POLE3Q9NRF9 147 aa9.05□□□□□ -0.96
CLN8-202ENST00000517514 P2RX2Q9UBL9 471 aa9.05□□□□□ -0.96
CLN8-202ENST00000517514 WDR45Q9Y484 360 aa9.05□□□□□ -0.96
CLN8-202ENST00000517514 PCDHGB3Q9Y5G1 929 aa9.05□□□□□ -0.96
CLN8-202ENST00000517514 SMG1Q96Q15 3661 aaKnown RBP9.04□□□□□ -0.96
CLN8-202ENST00000517514 A0A0G2JPF8 293 aa9.04□□□□□ -0.96
CLN8-202ENST00000517514 ANKRD33BA6NCL7 494 aa9.04□□□□□ -0.96
CLN8-202ENST00000517514 PRAMEF25A6NGN4 478 aa9.04□□□□□ -0.96
CLN8-202ENST00000517514 AGAP5A6NIR3 686 aa9.04□□□□□ -0.96
CLN8-202ENST00000517514 LRRC3CA6NJW4 275 aa9.04□□□□□ -0.96
CLN8-202ENST00000517514 HNRNPCL2B2RXH8 293 aa9.04□□□□□ -0.96
CLN8-202ENST00000517514 HNRNPCL3B7ZW38 293 aa9.04□□□□□ -0.96
CLN8-202ENST00000517514 TPST1O60507 370 aa9.04□□□□□ -0.96
CLN8-202ENST00000517514 HNRNPCL1O60812 293 aaKnown RBP9.04□□□□□ -0.96
CLN8-202ENST00000517514 TRIM3O75382 744 aaPredicted RBP9.04□□□□□ -0.96
CLN8-202ENST00000517514 HNRNPCL4P0DMR1 293 aa9.04□□□□□ -0.96
CLN8-202ENST00000517514 HSD17B1P14061 328 aa9.04□□□□□ -0.96
CLN8-202ENST00000517514 LCN1P31025 176 aa9.04□□□□□ -0.96
CLN8-202ENST00000517514 EVI2BP34910 448 aa9.04□□□□□ -0.96
CLN8-202ENST00000517514 DNASE1L1P49184 302 aa9.04□□□□□ -0.96
CLN8-202ENST00000517514 TMED10P49755 219 aaKnown RBP9.04□□□□□ -0.96
CLN8-202ENST00000517514 ANXA11P50995 505 aaKnown RBP9.04□□□□□ -0.96
CLN8-202ENST00000517514 GPR85P60893 370 aa9.04□□□□□ -0.96
CLN8-202ENST00000517514 EFR3AQ14156 821 aa9.04□□□□□ -0.96
CLN8-202ENST00000517514 GPR68Q15743 365 aa9.04□□□□□ -0.96
CLN8-202ENST00000517514 CYP51A1Q16850 503 aa9.04□□□□□ -0.96
CLN8-202ENST00000517514 ZNF630Q2M218 657 aaPredicted RBP9.04□□□□□ -0.96
CLN8-202ENST00000517514 NDUFAF6Q330K2 333 aa9.04□□□□□ -0.96
CLN8-202ENST00000517514 FLYWCH1Q4VC44 716 aa9.04□□□□□ -0.96
CLN8-202ENST00000517514 LACTB2Q53H82 288 aaPredicted RBP9.04□□□□□ -0.96
CLN8-202ENST00000517514 ZNF766Q5HY98 468 aa9.04□□□□□ -0.96
CLN8-202ENST00000517514 RNFT1Q5M7Z0 435 aa9.04□□□□□ -0.96
CLN8-202ENST00000517514 PDZK1Q5T2W1 519 aa9.04□□□□□ -0.96
CLN8-202ENST00000517514 PRAMEF8Q5VWM4 474 aa9.04□□□□□ -0.96
CLN8-202ENST00000517514 PRAMEF7Q5VXH5 474 aa9.04□□□□□ -0.96
CLN8-202ENST00000517514 SLC22A10Q63ZE4 541 aa9.04□□□□□ -0.96
CLN8-202ENST00000517514 SLC6A19Q695T7 634 aa9.04□□□□□ -0.96
CLN8-202ENST00000517514 REEP3Q6NUK4 255 aa9.04□□□□□ -0.96
CLN8-202ENST00000517514 C16orf89Q6UX73 402 aa9.04□□□□□ -0.96
CLN8-202ENST00000517514 CCDC80Q76M96 950 aa9.04□□□□□ -0.96
CLN8-202ENST00000517514 ASRGL1Q7L266 308 aa9.04□□□□□ -0.96
CLN8-202ENST00000517514 GALNTL5Q7Z4T8 443 aa9.04□□□□□ -0.96
CLN8-202ENST00000517514 MARCH3Q86UD3 253 aa9.04□□□□□ -0.96
CLN8-202ENST00000517514 IFNEQ86WN2 208 aa9.04□□□□□ -0.96
CLN8-202ENST00000517514 VRK2Q86Y07 508 aa9.04□□□□□ -0.96
CLN8-202ENST00000517514 SULF2Q8IWU5 870 aa9.04□□□□□ -0.96
CLN8-202ENST00000517514 ZNF619Q8N2I2 560 aa9.04□□□□□ -0.96
CLN8-202ENST00000517514 ZADH2Q8N4Q0 377 aa9.04□□□□□ -0.96
CLN8-202ENST00000517514 METTL25Q8N6Q8 603 aa9.04□□□□□ -0.96
CLN8-202ENST00000517514 WDSUB1Q8N9V3 476 aa9.04□□□□□ -0.96
CLN8-202ENST00000517514 C11orf65Q8NCR3 313 aa9.04□□□□□ -0.96
CLN8-202ENST00000517514 HIPK4Q8NE63 616 aa9.04□□□□□ -0.96
CLN8-202ENST00000517514 OR2T12Q8NG77 320 aa9.04□□□□□ -0.96
CLN8-202ENST00000517514 TAMM41Q96BW9 452 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms