RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 ADH6P28332 368 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 DCTP40126 519 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 ALDH3B1P43353 468 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 ZNF616Q08AN1 781 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 GINS1Q14691 196 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 TAF9Q16594 264 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 FIGNQ5HY92 759 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 FBXW12Q6X9E4 464 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 PHF13Q86YI8 300 aaPredicted RBP8.45□□□□□ -1.06
VCAN-208ENST00000512590 TMEM151AQ8N4L1 468 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 OR13C4Q8NGS5 318 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 OR2A12Q8NGT7 310 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 ATP5SQ99766 215 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 C1QTNF6Q9BXI9 259 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 GAL3ST2Q9H3Q3 398 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 CHRNA9Q9UGM1 479 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 SCML2Q9UQR0 700 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 FBXO7Q9Y3I1 522 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 USP3Q9Y6I4 520 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 CDX4O14627 284 aaPredicted RBP8.45□□□□□ -1.06
VCAN-208ENST00000512590 NUDT6P53370 316 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 SLC35A2P78381 396 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 HBMQ6B0K9 141 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 GPR153Q6NV75 609 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 ZNF767PQ75MW2 155 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 IQCKQ8N0W5 287 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 OR4F15Q8NGB8 312 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 ZNRF4Q8WWF5 429 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 SGK3Q96BR1 496 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 C3orf30Q96M34 536 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 PBDC1Q9BVG4 233 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 SLC40A1Q9NP59 571 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 ZCCHC17Q9NP64 241 aaKnown RBP8.45□□□□□ -1.06
VCAN-208ENST00000512590 WASH6PQ9NQA3 447 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 STARD5Q9NSY2 213 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 TCAPO15273 167 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 PRLP01236 227 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 CRYAAP02489 173 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 MAKP20794 623 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 G0S2P27469 103 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 PPIAP62937 165 aaKnown RBP8.45□□□□□ -1.06
VCAN-208ENST00000512590 ZNF468Q5VIY5 522 aaPredicted RBP8.45□□□□□ -1.06
VCAN-208ENST00000512590 SKA3Q8IX90 412 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 OR6F1Q8NGZ6 308 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 GIMAP1Q8WWP7 306 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 HAS1Q92839 578 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 ACSS3Q9H6R3 686 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 ZNF395Q9H8N7 513 aaPredicted RBP8.45□□□□□ -1.06
VCAN-208ENST00000512590 KCNMB2Q9Y691 235 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 CAPN6Q9Y6Q1 641 aa8.45□□□□□ -1.06
VCAN-208ENST00000512590 SLC5A10A0PJK1 596 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 C9JVG2 144 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 C17orf112F2Z3M2 114 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 F6UZH7 168 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 GABRDO14764 452 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 PSMD10O75832 226 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 SORBS2O94875 1100 aaKnown RBP8.44□□□□□ -1.06
VCAN-208ENST00000512590 MBP02144 154 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 IL3P08700 152 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 SPATA31C1P0DKV0 1188 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 KDELR2P33947 212 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 TLE1Q04724 770 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 GLO1Q04760 184 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 ZNF33AQ06730 810 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 TAZQ16635 292 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 UGCGQ16739 394 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 C4orf17Q53FE4 359 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 PRAMEF20Q5VT98 475 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 FBXL22Q6P050 247 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 LRRN1Q6UXK5 716 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 IL31RAQ8NI17 732 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 HTRA1Q92743 480 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 ZNF775Q96BV0 537 aaPredicted RBP8.44□□□□□ -1.06
VCAN-208ENST00000512590 TEPSINQ96N21 525 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 VRTNQ9H8Y1 702 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 OR2S2Q9NQN1 319 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 PNPLA3Q9NST1 481 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 KLF13Q9Y2Y9 288 aaPredicted RBP8.44□□□□□ -1.06
VCAN-208ENST00000512590 DNPH1O43598 174 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 NIPSNAP2O75323 286 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 BANF1O75531 89 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 CT45A10P0DMU9 189 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 UQCRC2P22695 453 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 GJA4P35212 333 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 PPT1P50897 306 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 CLDN2P57739 230 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 CFAP77Q6ZQR2 320 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 Q6ZVL8 140 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 TMEM40Q8WWA1 233 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 CDK15Q96Q40 435 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 CITED4Q96RK1 184 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 FOXQ1Q9C009 403 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 DMAC2Q9NW81 257 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 TMEM181Q9P2C4 612 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 TFR2Q9UP52 801 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 PLEKHM1Q9Y4G2 1056 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 HECW2Q9P2P5 1572 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 TNS2Q63HR2 1409 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 PMM2O15305 246 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 OR2T1O43869 369 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms