RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 NAP1L5Q96NT1 182 aaPredicted RBP3.04□□□□□ -1.92
TOPBP1-208ENST00000511439 ACBD6Q9BR61 282 aa3.04□□□□□ -1.92
TOPBP1-208ENST00000511439 WDR13Q9H1Z4 485 aa3.04□□□□□ -1.92
TOPBP1-208ENST00000511439 ZDHHC6Q9H6R6 413 aa3.04□□□□□ -1.92
TOPBP1-208ENST00000511439 FGF22Q9HCT0 170 aa3.04□□□□□ -1.92
TOPBP1-208ENST00000511439 MRGBPQ9NV56 204 aa3.04□□□□□ -1.92
TOPBP1-208ENST00000511439 ATAD3AQ9NVI7 634 aa3.04□□□□□ -1.92
TOPBP1-208ENST00000511439 OR6C2Q9NZP2 312 aa3.04□□□□□ -1.92
TOPBP1-208ENST00000511439 LEF1Q9UJU2 399 aaPredicted RBP3.04□□□□□ -1.92
TOPBP1-208ENST00000511439 PPP2R2CQ9Y2T4 447 aa3.04□□□□□ -1.92
TOPBP1-208ENST00000511439 CACNA1CQ13936 2221 aa3.04□□□□□ -1.92
TOPBP1-208ENST00000511439 TRBV5-5A0A0J9YX44 114 aa3.03□□□□□ -1.92
TOPBP1-208ENST00000511439 POLR1CO15160 346 aaPredicted RBP3.03□□□□□ -1.92
TOPBP1-208ENST00000511439 SLC19A2O60779 497 aa3.03□□□□□ -1.92
TOPBP1-208ENST00000511439 FCGR3BO75015 233 aa3.03□□□□□ -1.92
TOPBP1-208ENST00000511439 KRT33AO76009 404 aa3.03□□□□□ -1.92
TOPBP1-208ENST00000511439 ZFAND5O76080 213 aa3.03□□□□□ -1.92
TOPBP1-208ENST00000511439 PGLSO95336 258 aa3.03□□□□□ -1.92
TOPBP1-208ENST00000511439 MT-ND3P03897 115 aa3.03□□□□□ -1.92
TOPBP1-208ENST00000511439 HOXD4P09016 255 aaPredicted RBP3.03□□□□□ -1.92
TOPBP1-208ENST00000511439 EPORP19235 508 aa3.03□□□□□ -1.92
TOPBP1-208ENST00000511439 MUTP22033 750 aa3.03□□□□□ -1.92
TOPBP1-208ENST00000511439 LHCGRP22888 699 aa3.03□□□□□ -1.92
TOPBP1-208ENST00000511439 PSMB4P28070 264 aa3.03□□□□□ -1.92
TOPBP1-208ENST00000511439 DRD3P35462 400 aa3.03□□□□□ -1.92
TOPBP1-208ENST00000511439 TDGF1P3P51864 188 aa3.03□□□□□ -1.92
TOPBP1-208ENST00000511439 SLC12A3P55017 1021 aa3.03□□□□□ -1.92
TOPBP1-208ENST00000511439 SULT2A1Q06520 285 aa3.03□□□□□ -1.92
TOPBP1-208ENST00000511439 EXT1Q16394 746 aa3.03□□□□□ -1.92
TOPBP1-208ENST00000511439 IMMTQ16891 758 aaKnown RBP3.03□□□□□ -1.92
TOPBP1-208ENST00000511439 PWWP2BQ6NUJ5 590 aa3.03□□□□□ -1.92
TOPBP1-208ENST00000511439 NEK5Q6P3R8 708 aa3.03□□□□□ -1.92
TOPBP1-208ENST00000511439 MYO7BQ6PIF6 2116 aa3.03□□□□□ -1.92
TOPBP1-208ENST00000511439 CASC1Q6TDU7 716 aa3.03□□□□□ -1.92
TOPBP1-208ENST00000511439 Q6ZSR9 355 aa3.03□□□□□ -1.92
TOPBP1-208ENST00000511439 MYPOPQ86VE0 399 aaPredicted RBP3.03□□□□□ -1.92
TOPBP1-208ENST00000511439 HORMAD1Q86X24 394 aa3.03□□□□□ -1.92
TOPBP1-208ENST00000511439 SNX32Q86XE0 403 aa3.03□□□□□ -1.92
TOPBP1-208ENST00000511439 GKN2Q86XP6 184 aa3.03□□□□□ -1.92
TOPBP1-208ENST00000511439 CLYBLQ8N0X4 340 aa3.03□□□□□ -1.92
TOPBP1-208ENST00000511439 LRRC75A-AS1Q8N1F1 130 aa3.03□□□□□ -1.92
TOPBP1-208ENST00000511439 KLHDC1Q8N7A1 406 aa3.03□□□□□ -1.92
TOPBP1-208ENST00000511439 KIAA0895Q8NCT3 520 aa3.03□□□□□ -1.92
TOPBP1-208ENST00000511439 OR7A2PQ8NGA2 310 aa3.03□□□□□ -1.92
TOPBP1-208ENST00000511439 OR10G8Q8NGN5 311 aa3.03□□□□□ -1.92
TOPBP1-208ENST00000511439 OR1L3Q8NH93 324 aa3.03□□□□□ -1.92
TOPBP1-208ENST00000511439 KLK6Q92876 244 aa3.03□□□□□ -1.92
TOPBP1-208ENST00000511439 FBXO32Q969P5 355 aa3.03□□□□□ -1.92
TOPBP1-208ENST00000511439 GDAP1L1Q96MZ0 367 aa3.03□□□□□ -1.92
TOPBP1-208ENST00000511439 NDNQ99608 321 aa3.03□□□□□ -1.92
TOPBP1-208ENST00000511439 PIGQQ9BRB3 760 aa3.03□□□□□ -1.92
TOPBP1-208ENST00000511439 SDCBP2Q9H190 292 aa3.03□□□□□ -1.92
TOPBP1-208ENST00000511439 P2RY12Q9H244 342 aa3.03□□□□□ -1.92
TOPBP1-208ENST00000511439 TCEAL2Q9H3H9 227 aaPredicted RBP3.03□□□□□ -1.92
TOPBP1-208ENST00000511439 GRPEL1Q9HAV7 217 aa3.03□□□□□ -1.92
TOPBP1-208ENST00000511439 PPANQ9NQ55 473 aaKnown RBP3.03□□□□□ -1.92
TOPBP1-208ENST00000511439 FBXO8Q9NRD0 319 aa3.03□□□□□ -1.92
TOPBP1-208ENST00000511439 PKD2L2Q9NZM6 624 aa3.03□□□□□ -1.92
TOPBP1-208ENST00000511439 WRAP73Q9P2S5 460 aaPredicted RBP3.03□□□□□ -1.92
TOPBP1-208ENST00000511439 DNAJB9Q9UBS3 223 aa3.03□□□□□ -1.92
TOPBP1-208ENST00000511439 CACNG5Q9UF02 275 aa3.03□□□□□ -1.92
TOPBP1-208ENST00000511439 EPHA6Q9UF33 1036 aa3.03□□□□□ -1.92
TOPBP1-208ENST00000511439 C19orf25Q9UFG5 118 aaPredicted RBP3.03□□□□□ -1.92
TOPBP1-208ENST00000511439 ZNF510Q9Y2H8 683 aa3.03□□□□□ -1.92
TOPBP1-208ENST00000511439 MRPS28Q9Y2Q9 187 aaKnown RBP3.03□□□□□ -1.92
TOPBP1-208ENST00000511439 MEMO1Q9Y316 297 aa3.03□□□□□ -1.92
TOPBP1-208ENST00000511439 FER1L5A0AVI2 2057 aa3.03□□□□□ -1.92
TOPBP1-208ENST00000511439 MYH10P35580 1976 aa3.03□□□□□ -1.92
TOPBP1-208ENST00000511439 NCOA6Q14686 2063 aaPredicted RBP3.02□□□□□ -1.93
TOPBP1-208ENST00000511439 LRP4O75096 1905 aa3.02□□□□□ -1.93
TOPBP1-208ENST00000511439 FPGTO14772 594 aa3.02□□□□□ -1.93
TOPBP1-208ENST00000511439 SMPD2O60906 423 aa3.02□□□□□ -1.93
TOPBP1-208ENST00000511439 ZNF821O75541 412 aaPredicted RBP3.02□□□□□ -1.93
TOPBP1-208ENST00000511439 C9P02748 559 aa3.02□□□□□ -1.93
TOPBP1-208ENST00000511439 CXCL8P10145 99 aa3.02□□□□□ -1.93
TOPBP1-208ENST00000511439 CTSEP14091 401 aa3.02□□□□□ -1.93
TOPBP1-208ENST00000511439 LBPP18428 481 aa3.02□□□□□ -1.93
TOPBP1-208ENST00000511439 POLR2EP19388 210 aaKnown RBP3.02□□□□□ -1.93
TOPBP1-208ENST00000511439 PTPN4P29074 926 aa3.02□□□□□ -1.93
TOPBP1-208ENST00000511439 HLA-FP30511 346 aa3.02□□□□□ -1.93
TOPBP1-208ENST00000511439 SNRPD1P62314 119 aaKnown RBP3.02□□□□□ -1.93
TOPBP1-208ENST00000511439 RPS15P62841 145 aaKnown RBP3.02□□□□□ -1.93
TOPBP1-208ENST00000511439 TRDNQ13061 729 aa3.02□□□□□ -1.93
TOPBP1-208ENST00000511439 PPP2R5CQ13362 524 aa3.02□□□□□ -1.93
TOPBP1-208ENST00000511439 ELAVL3Q14576 367 aaKnown RBP3.02□□□□□ -1.93
TOPBP1-208ENST00000511439 TMEM187Q14656 261 aa3.02□□□□□ -1.93
TOPBP1-208ENST00000511439 OPCMLQ14982 345 aa3.02□□□□□ -1.93
TOPBP1-208ENST00000511439 TMEM132DQ14C87 1099 aa3.02□□□□□ -1.93
TOPBP1-208ENST00000511439 INAQ16352 499 aa3.02□□□□□ -1.93
TOPBP1-208ENST00000511439 RBBP7Q16576 425 aa3.02□□□□□ -1.93
TOPBP1-208ENST00000511439 C3AR1Q16581 482 aa3.02□□□□□ -1.93
TOPBP1-208ENST00000511439 ZFP69Q49AA0 526 aa3.02□□□□□ -1.93
TOPBP1-208ENST00000511439 C9orf64Q5T6V5 341 aa3.02□□□□□ -1.93
TOPBP1-208ENST00000511439 FAM46CQ5VWP2 391 aa3.02□□□□□ -1.93
TOPBP1-208ENST00000511439 FAM166AQ6J272 317 aa3.02□□□□□ -1.93
TOPBP1-208ENST00000511439 CYB5D1Q6P9G0 228 aa3.02□□□□□ -1.93
TOPBP1-208ENST00000511439 BTN2A1Q7KYR7 527 aa3.02□□□□□ -1.93
TOPBP1-208ENST00000511439 PAQR7Q86WK9 346 aa3.02□□□□□ -1.93
TOPBP1-208ENST00000511439 WDR49Q8IV35 697 aa3.02□□□□□ -1.93
TOPBP1-208ENST00000511439 ITPRIPQ8IWB1 547 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms