RNA–Protein interactions for RNA: ENST00000509912.5

NEK1-204, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 2,971 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-204ENST00000509912 GNPDA1P46926 289 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 TPD52P55327 224 aaPredicted RBP4.56□□□□□ -1.68
NEK1-204ENST00000509912 MRPS25P82663 173 aaKnown RBP4.56□□□□□ -1.68
NEK1-204ENST00000509912 RBPJQ06330 500 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 C2orf54Q08AI8 447 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 SLC10A2Q12908 348 aaPredicted RBP4.56□□□□□ -1.68
NEK1-204ENST00000509912 RPS6KA1Q15418 735 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 EFNB3Q15768 340 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 MEP1AQ16819 746 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 MEP1BQ16820 701 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 PCGF3Q3KNV8 242 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 LSM12Q3MHD2 195 aaKnown RBP4.56□□□□□ -1.68
NEK1-204ENST00000509912 KCTD16Q68DU8 428 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 SCYL2Q6P3W7 929 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 TIPARPQ7Z3E1 657 aaKnown RBP4.56□□□□□ -1.68
NEK1-204ENST00000509912 PHLDB2Q86SQ0 1253 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 AMZ2Q86W34 360 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 PYROXD2Q8N2H3 581 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 TMEM18Q96B42 140 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 ZNF582Q96NG8 517 aaPredicted RBP4.56□□□□□ -1.68
NEK1-204ENST00000509912 FAM110AQ9BQ89 295 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 NSRP1Q9H0G5 558 aaKnown RBP4.56□□□□□ -1.68
NEK1-204ENST00000509912 THAP2Q9H0W7 228 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 CDC42EP4Q9H3Q1 356 aaKnown RBP4.56□□□□□ -1.68
NEK1-204ENST00000509912 GPN2Q9H9Y4 310 aaPredicted RBP4.56□□□□□ -1.68
NEK1-204ENST00000509912 RDH14Q9HBH5 336 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 SPAG4Q9NPE6 437 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 BATF3Q9NR55 127 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.56□□□□□ -1.68
NEK1-204ENST00000509912 MSRB1Q9NZV6 116 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 ZNF624Q9P2J8 865 aaPredicted RBP4.56□□□□□ -1.68
NEK1-204ENST00000509912 RARRES3Q9UL19 164 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 SNX12Q9UMY4 172 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 AHCTF1Q8WYP5 2266 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 FREM2Q5SZK8 3169 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 DOPEY2Q9Y3R5 2298 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 A0A096LPK6 155 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 A0A0J9YY10 115 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 HTR3EA5X5Y0 456 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 J3QR06 171 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 RASGRF2O14827 1237 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 TTI1O43156 1089 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 MFSD11O43934 449 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 CDH16O75309 829 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 GUSBP08236 651 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 ATP1B2P14415 290 aaPredicted RBP4.56□□□□□ -1.68
NEK1-204ENST00000509912 PRKAA1Q13131 559 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 OASLQ15646 514 aaKnown RBP4.56□□□□□ -1.68
NEK1-204ENST00000509912 CHRNA6Q15825 494 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 PRTGQ2VWP7 1150 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 CEP78Q5JTW2 689 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 ZNF793Q6ZN11 406 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 SSX8Q7RTT4 187 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 ZNF547Q8IVP9 402 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 SFTPA2Q8IWL1 248 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 RAB42Q8N4Z0 105 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 OR5K2Q8NHB8 316 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 CCL4L1Q8NHW4 92 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 SLC37A2Q8TED4 501 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 ART4Q93070 314 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 SPSB1Q96BD6 273 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 TM4SF19Q96DZ7 209 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 RBM18Q96H35 190 aaKnown RBP4.56□□□□□ -1.68
NEK1-204ENST00000509912 MS4A14Q96JA4 679 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 PANX3Q96QZ0 392 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 EHD1Q9H4M9 534 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 NOX4Q9NPH5 578 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 LHX9Q9NQ69 397 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 IARS2Q9NSE4 1012 aaKnown RBP4.56□□□□□ -1.68
NEK1-204ENST00000509912 TREX1Q9NSU2 369 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 PAK5Q9P286 719 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 ANAPC7Q9UJX3 599 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 FARSAQ9Y285 508 aaKnown RBP4.56□□□□□ -1.68
NEK1-204ENST00000509912 CFAP46Q8IYW2 2715 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 GLYATL1P3A0A0U1RQE8 302 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 FEZF1A0PJY2 475 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 GRID2IPA4D2P6 1211 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 H3BQF6 201 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 LDB2O43679 373 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 STSP08842 583 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 SBK2P0C263 348 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 HAAOP46952 286 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 RAB28P51157 221 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 VSNL1P62760 191 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 IHHQ14623 411 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 LRRC8BQ6P9F7 803 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 UBL4BQ8N7F7 174 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 NEXN-AS1Q8NBZ9 246 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 OR4K1Q8NGD4 311 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 CELF6Q96J87 481 aaKnown RBP4.56□□□□□ -1.68
NEK1-204ENST00000509912 OR1F2PQ96R84 312 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 TSC22D3Q99576 134 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 RIOK2Q9BVS4 552 aaKnown RBP4.56□□□□□ -1.68
NEK1-204ENST00000509912 RAD21L1Q9H4I0 556 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 IL26Q9NPH9 171 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 INIPQ9NRY2 104 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 RHBDL2Q9NX52 303 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 ENTPD4Q9Y227 616 aa4.56□□□□□ -1.68
NEK1-204ENST00000509912 MRPS18CQ9Y3D5 142 aaKnown RBP4.56□□□□□ -1.68
NEK1-204ENST00000509912 TENM4Q6N022 2769 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms