RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 MUC21Q5SSG8 566 aa3.26□□□□□ -1.89
TRAPPC13-208ENST00000505553 CARD17Q5XLA6 110 aa3.26□□□□□ -1.89
TRAPPC13-208ENST00000505553 WDR25Q64LD2 544 aaPredicted RBP3.26□□□□□ -1.89
TRAPPC13-208ENST00000505553 VITQ6UXI7 678 aa3.26□□□□□ -1.89
TRAPPC13-208ENST00000505553 Q6ZTC4 211 aa3.26□□□□□ -1.89
TRAPPC13-208ENST00000505553 NUFIP2Q7Z417 695 aaKnown RBP3.26□□□□□ -1.89
TRAPPC13-208ENST00000505553 SMIM29Q86T20 159 aa3.26□□□□□ -1.89
TRAPPC13-208ENST00000505553 PAQR7Q86WK9 346 aa3.26□□□□□ -1.89
TRAPPC13-208ENST00000505553 BEST4Q8NFU0 473 aa3.26□□□□□ -1.89
TRAPPC13-208ENST00000505553 RAB3IL1Q8TBN0 382 aa3.26□□□□□ -1.89
TRAPPC13-208ENST00000505553 AGR3Q8TD06 166 aa3.26□□□□□ -1.89
TRAPPC13-208ENST00000505553 AENQ8WTP8 325 aaKnown RBP3.26□□□□□ -1.89
TRAPPC13-208ENST00000505553 TMEM190Q8WZ59 177 aa3.26□□□□□ -1.89
TRAPPC13-208ENST00000505553 C11orf52Q96A22 123 aa3.26□□□□□ -1.89
TRAPPC13-208ENST00000505553 PELI1Q96FA3 418 aa3.26□□□□□ -1.89
TRAPPC13-208ENST00000505553 C12orf66Q96MD2 445 aa3.26□□□□□ -1.89
TRAPPC13-208ENST00000505553 SLC6A7Q99884 636 aa3.26□□□□□ -1.89
TRAPPC13-208ENST00000505553 MTG1Q9BT17 334 aaPredicted RBP3.26□□□□□ -1.89
TRAPPC13-208ENST00000505553 CHRDL1Q9BU40 450 aa3.26□□□□□ -1.89
TRAPPC13-208ENST00000505553 DUSP16Q9BY84 665 aa3.26□□□□□ -1.89
TRAPPC13-208ENST00000505553 STRADBQ9C0K7 418 aa3.26□□□□□ -1.89
TRAPPC13-208ENST00000505553 ZNF556Q9HAH1 456 aa3.26□□□□□ -1.89
TRAPPC13-208ENST00000505553 MCCC2Q9HCC0 563 aa3.26□□□□□ -1.89
TRAPPC13-208ENST00000505553 RAB18Q9NP72 206 aa3.26□□□□□ -1.89
TRAPPC13-208ENST00000505553 IL1RAPQ9NPH3 570 aa3.26□□□□□ -1.89
TRAPPC13-208ENST00000505553 ESM1Q9NQ30 184 aa3.26□□□□□ -1.89
TRAPPC13-208ENST00000505553 GLRX2Q9NS18 164 aa3.26□□□□□ -1.89
TRAPPC13-208ENST00000505553 DEPPQ9NTK1 212 aa3.26□□□□□ -1.89
TRAPPC13-208ENST00000505553 THEGQ9P2T0 379 aa3.26□□□□□ -1.89
TRAPPC13-208ENST00000505553 ADAM28Q9UKQ2 775 aa3.26□□□□□ -1.89
TRAPPC13-208ENST00000505553 NPTNQ9Y639 398 aa3.26□□□□□ -1.89
TRAPPC13-208ENST00000505553 GREB1LQ9C091 1923 aaPredicted RBP3.25□□□□□ -1.89
TRAPPC13-208ENST00000505553 TRIP12Q14669 1992 aaPredicted RBP3.25□□□□□ -1.89
TRAPPC13-208ENST00000505553 HEATR9A2RTY3 570 aa3.25□□□□□ -1.89
TRAPPC13-208ENST00000505553 HHLA1C9JL84 531 aa3.25□□□□□ -1.89
TRAPPC13-208ENST00000505553 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.25□□□□□ -1.89
TRAPPC13-208ENST00000505553 L7N2F9 121 aa3.25□□□□□ -1.89
TRAPPC13-208ENST00000505553 TFECO14948 347 aaPredicted RBP3.25□□□□□ -1.89
TRAPPC13-208ENST00000505553 MSH4O15457 936 aa3.25□□□□□ -1.89
TRAPPC13-208ENST00000505553 LRRTM2O43300 516 aa3.25□□□□□ -1.89
TRAPPC13-208ENST00000505553 TYROBPO43914 113 aa3.25□□□□□ -1.89
TRAPPC13-208ENST00000505553 TRIM3O75382 744 aaPredicted RBP3.25□□□□□ -1.89
TRAPPC13-208ENST00000505553 FRAT2O75474 233 aaPredicted RBP3.25□□□□□ -1.89
TRAPPC13-208ENST00000505553 FCGR3AP08637 254 aa3.25□□□□□ -1.89
TRAPPC13-208ENST00000505553 IGFBP1P08833 259 aaPredicted RBP3.25□□□□□ -1.89
TRAPPC13-208ENST00000505553 ALPIP09923 528 aa3.25□□□□□ -1.89
TRAPPC13-208ENST00000505553 HSD17B1P14061 328 aa3.25□□□□□ -1.89
TRAPPC13-208ENST00000505553 ACADSP16219 412 aa3.25□□□□□ -1.89
TRAPPC13-208ENST00000505553 XRCC1P18887 633 aaPredicted RBP3.25□□□□□ -1.89
TRAPPC13-208ENST00000505553 PCMT1P22061 227 aa3.25□□□□□ -1.89
TRAPPC13-208ENST00000505553 ANOS1P23352 680 aa3.25□□□□□ -1.89
TRAPPC13-208ENST00000505553 ATP5A1P25705 553 aaKnown RBP3.25□□□□□ -1.89
TRAPPC13-208ENST00000505553 TIMP3P35625 211 aa3.25□□□□□ -1.89
TRAPPC13-208ENST00000505553 HPCAL1P37235 193 aa3.25□□□□□ -1.89
TRAPPC13-208ENST00000505553 SEC61GP60059 68 aa3.25□□□□□ -1.89
TRAPPC13-208ENST00000505553 KRTAP10-5P60370 271 aa3.25□□□□□ -1.89
TRAPPC13-208ENST00000505553 OTUD4Q01804 1114 aaKnown RBP3.25□□□□□ -1.89
TRAPPC13-208ENST00000505553 ZNF85Q03923 595 aa3.25□□□□□ -1.89
TRAPPC13-208ENST00000505553 DPYSL2Q16555 572 aa3.25□□□□□ -1.89
TRAPPC13-208ENST00000505553 STPG1Q5TH74 334 aa3.25□□□□□ -1.89
TRAPPC13-208ENST00000505553 OR4F3Q6IEY1 312 aa3.25□□□□□ -1.89
TRAPPC13-208ENST00000505553 PWWP2BQ6NUJ5 590 aa3.25□□□□□ -1.89
TRAPPC13-208ENST00000505553 APTXQ7Z2E3 356 aaKnown RBP3.25□□□□□ -1.89
TRAPPC13-208ENST00000505553 KCNMB4Q86W47 210 aa3.25□□□□□ -1.89
TRAPPC13-208ENST00000505553 ECHDC2Q86YB7 292 aa3.25□□□□□ -1.89
TRAPPC13-208ENST00000505553 CEP112Q8N8E3 955 aa3.25□□□□□ -1.89
TRAPPC13-208ENST00000505553 OR1B1Q8NGR6 318 aa3.25□□□□□ -1.89
TRAPPC13-208ENST00000505553 OR1F12Q8NHA8 337 aa3.25□□□□□ -1.89
TRAPPC13-208ENST00000505553 CNIH3Q8TBE1 160 aa3.25□□□□□ -1.89
TRAPPC13-208ENST00000505553 M1APQ8TC57 530 aa3.25□□□□□ -1.89
TRAPPC13-208ENST00000505553 CNRIP1Q96F85 164 aaPredicted RBP3.25□□□□□ -1.89
TRAPPC13-208ENST00000505553 NSMCE3Q96MG7 304 aa3.25□□□□□ -1.89
TRAPPC13-208ENST00000505553 ST6GALNAC5Q9BVH7 336 aa3.25□□□□□ -1.89
TRAPPC13-208ENST00000505553 NUP58Q9BVL2 599 aa3.25□□□□□ -1.89
TRAPPC13-208ENST00000505553 PARD6BQ9BYG5 372 aa3.25□□□□□ -1.89
TRAPPC13-208ENST00000505553 ROPN1BQ9BZX4 212 aaPredicted RBP3.25□□□□□ -1.89
TRAPPC13-208ENST00000505553 NXF5Q9H1B4 397 aaKnown RBP3.25□□□□□ -1.89
TRAPPC13-208ENST00000505553 LRRN3Q9H3W5 708 aa3.25□□□□□ -1.89
TRAPPC13-208ENST00000505553 RNF41Q9H4P4 317 aaPredicted RBP3.25□□□□□ -1.89
TRAPPC13-208ENST00000505553 EXO5Q9H790 373 aa3.25□□□□□ -1.89
TRAPPC13-208ENST00000505553 SPHK2Q9NRA0 654 aa3.25□□□□□ -1.89
TRAPPC13-208ENST00000505553 SLC2A8Q9NY64 477 aa3.25□□□□□ -1.89
TRAPPC13-208ENST00000505553 ONECUT1Q9UBC0 465 aa3.25□□□□□ -1.89
TRAPPC13-208ENST00000505553 RARRES3Q9UL19 164 aa3.25□□□□□ -1.89
TRAPPC13-208ENST00000505553 MGAT4AQ9UM21 535 aa3.25□□□□□ -1.89
TRAPPC13-208ENST00000505553 ICAM5Q9UMF0 924 aa3.25□□□□□ -1.89
TRAPPC13-208ENST00000505553 EXOGQ9Y2C4 368 aaKnown RBP3.25□□□□□ -1.89
TRAPPC13-208ENST00000505553 IFT52Q9Y366 437 aa3.25□□□□□ -1.89
TRAPPC13-208ENST00000505553 WDR19Q8NEZ3 1342 aa3.25□□□□□ -1.89
TRAPPC13-208ENST00000505553 SMCHD1A6NHR9 2005 aa3.24□□□□□ -1.89
TRAPPC13-208ENST00000505553 IGHV3-38A0A0C4DH36 116 aa3.24□□□□□ -1.89
TRAPPC13-208ENST00000505553 MEIOCA2RUB1 952 aa3.24□□□□□ -1.89
TRAPPC13-208ENST00000505553 OR6C65A6NJZ3 312 aa3.24□□□□□ -1.89
TRAPPC13-208ENST00000505553 GOLGA8SH3BPF8 625 aa3.24□□□□□ -1.89
TRAPPC13-208ENST00000505553 CASC3O15234 703 aaKnown RBP3.24□□□□□ -1.89
TRAPPC13-208ENST00000505553 NBR2O15453 112 aa3.24□□□□□ -1.89
TRAPPC13-208ENST00000505553 JCHAINP01591 159 aa3.24□□□□□ -1.89
TRAPPC13-208ENST00000505553 SNRPCP09234 159 aaKnown RBP3.24□□□□□ -1.89
TRAPPC13-208ENST00000505553 CCDC159P0C7I6 412 aa3.24□□□□□ -1.89
TRAPPC13-208ENST00000505553 GNB3P16520 340 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms