RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 PRICKLE3O43900 615 aaPredicted RBP7.14□□□□□ -1.27
NEDD9-208ENST00000504387 FZD6O60353 706 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 ATG13O75143 517 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 ATG12O94817 140 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 VNN2O95498 520 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 IGF2P01344 180 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 IGLV3-27P01718 113 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 PTX3P26022 381 aaPredicted RBP7.14□□□□□ -1.27
NEDD9-208ENST00000504387 PYCR1P32322 319 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 ADH7P40394 386 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 EPHB3P54753 998 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 LGALS3BPQ08380 585 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 MRPL58Q14197 206 aaKnown RBP7.14□□□□□ -1.27
NEDD9-208ENST00000504387 ODF4Q2M2E3 257 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 HES5Q5TA89 166 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 TMEM107Q6UX40 140 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.14□□□□□ -1.27
NEDD9-208ENST00000504387 NKAIN4Q8IVV8 208 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 KLHL36Q8N4N3 616 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 C17orf47Q8NEP4 570 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 CNOT9Q92600 299 aaKnown RBP7.14□□□□□ -1.27
NEDD9-208ENST00000504387 C16orf58Q96GQ5 468 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 TEFMQ96QE5 360 aaKnown RBP7.14□□□□□ -1.27
NEDD9-208ENST00000504387 OR1F2PQ96R84 312 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 GPR174Q9BXC1 333 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 SLC25A18Q9H1K4 315 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 ZCCHC3Q9NUD5 404 aaKnown RBP7.14□□□□□ -1.27
NEDD9-208ENST00000504387 SLC13A4Q9UKG4 626 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 A4GNTQ9UNA3 340 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 GPR55Q9Y2T6 319 aaPredicted RBP7.14□□□□□ -1.27
NEDD9-208ENST00000504387 KCNE3Q9Y6H6 103 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 SESN1Q9Y6P5 492 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 TDRD15B5MCY1 1934 aaKnown RBP7.14□□□□□ -1.27
NEDD9-208ENST00000504387 PLXND1Q9Y4D7 1925 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 GBF1Q92538 1859 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 PLXNA4Q9HCM2 1894 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 DAPL1A0PJW8 107 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 PRODHO43272 600 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 ADAMTS4O75173 837 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 LGI1O95970 557 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 CD9P21926 228 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 PSMB5P28074 263 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 GRPRP30550 384 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 HMGA2P52926 109 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 EEF1A2Q05639 463 aaKnown RBP7.14□□□□□ -1.27
NEDD9-208ENST00000504387 PCDH1Q08174 1060 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 TPBGQ13641 420 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 ZNF273Q14593 569 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 GSG1Q2KHT4 349 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 ARHGAP15Q53QZ3 475 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 CLLU1Q5K131 121 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 LIPJQ5W064 366 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 C11orf88Q6PI97 169 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 TMEM220Q6QAJ8 160 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 SLC36A4Q6YBV0 504 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 GPAT4Q86UL3 456 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 VRK2Q86Y07 508 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 ARL14Q8N4G2 192 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 FAM26EQ8N5C1 309 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 SAMD8Q96LT4 415 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 SLC38A2Q96QD8 506 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 HCAR1Q9BXC0 346 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 ZNF436Q9C0F3 470 aaPredicted RBP7.14□□□□□ -1.27
NEDD9-208ENST00000504387 FZD3Q9NPG1 666 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 TMEM138Q9NPI0 162 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 COPZ2Q9P299 210 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 Q9Y3F1 56 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 PLXNB2O15031 1838 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 PRAMEF27A3QJZ7 478 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 ANTXRLA6NF34 631 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 CA12O43570 354 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 NARSO43776 548 aaKnown RBP7.14□□□□□ -1.27
NEDD9-208ENST00000504387 KHDRBS3O75525 346 aaKnown RBP7.14□□□□□ -1.27
NEDD9-208ENST00000504387 CATP04040 527 aaKnown RBP7.14□□□□□ -1.27
NEDD9-208ENST00000504387 RD3LP0DJH9 198 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 CBR1P16152 277 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 IRS1P35568 1242 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 PXNP49023 591 aaPredicted RBP7.14□□□□□ -1.27
NEDD9-208ENST00000504387 PSMA6P60900 246 aaKnown RBP7.14□□□□□ -1.27
NEDD9-208ENST00000504387 SNRPD1P62314 119 aaKnown RBP7.14□□□□□ -1.27
NEDD9-208ENST00000504387 ZNF33BQ06732 778 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 ZNF155Q12901 538 aaPredicted RBP7.14□□□□□ -1.27
NEDD9-208ENST00000504387 HTR4Q13639 388 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 KCNC3Q14003 757 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 C3orf38Q5JPI3 329 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 SFXN4Q6P4A7 337 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 HSD11B1LQ7Z5J1 315 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 NRMQ8IXM6 262 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 GPALPP1Q8IXQ4 340 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 ZNF454Q8N9F8 522 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 ZNF480Q8WV37 535 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 FATE1Q969F0 183 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 ECHDC3Q96DC8 303 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 SCMH1Q96GD3 660 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 DERL3Q96Q80 235 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 ZNF559Q9BR84 538 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 ENKD1Q9H0I2 346 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 PCDHB16Q9NRJ7 776 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 PFDN2Q9UHV9 154 aa7.14□□□□□ -1.27
NEDD9-208ENST00000504387 MRTO4Q9UKD2 239 aaKnown RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms