RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 PNO1Q9NRX1 252 aaKnown RBP20.39■□□□□ 0.86
PTPN13-205ENST00000502971 DTX4Q9Y2E6 619 aa20.39■□□□□ 0.86
PTPN13-205ENST00000502971 CACNA1HO95180 2353 aa20.39■□□□□ 0.85
PTPN13-205ENST00000502971 CT45A8P0DMV1 189 aa20.39■□□□□ 0.85
PTPN13-205ENST00000502971 CT45A9P0DMV2 189 aa20.39■□□□□ 0.85
PTPN13-205ENST00000502971 FMO3P31513 532 aa20.39■□□□□ 0.85
PTPN13-205ENST00000502971 ALDH6A1Q02252 535 aaKnown RBP20.39■□□□□ 0.85
PTPN13-205ENST00000502971 CT45A2Q5DJT8 189 aa20.39■□□□□ 0.85
PTPN13-205ENST00000502971 C1orf189Q5VU69 101 aa20.39■□□□□ 0.85
PTPN13-205ENST00000502971 GPR141Q7Z602 305 aa20.39■□□□□ 0.85
PTPN13-205ENST00000502971 SENP5Q96HI0 755 aaPredicted RBP20.39■□□□□ 0.85
PTPN13-205ENST00000502971 SYNDIG1Q9H7V2 258 aa20.39■□□□□ 0.85
PTPN13-205ENST00000502971 RASSF1Q9NS23 344 aa20.39■□□□□ 0.85
PTPN13-205ENST00000502971 PCDHGA10Q9Y5H3 936 aa20.39■□□□□ 0.85
PTPN13-205ENST00000502971 NPIPA5A0A0B4J1W7 369 aa20.38■□□□□ 0.85
PTPN13-205ENST00000502971 TCRBV16S1A1N1A0A5B0 115 aa20.38■□□□□ 0.85
PTPN13-205ENST00000502971 NPIPA7E9PJI5 369 aa20.38■□□□□ 0.85
PTPN13-205ENST00000502971 FMO6PO60774 539 aa20.38■□□□□ 0.85
PTPN13-205ENST00000502971 NPIPA8P0DM63 369 aa20.38■□□□□ 0.85
PTPN13-205ENST00000502971 JUNBP17275 347 aaPredicted RBP20.38■□□□□ 0.85
PTPN13-205ENST00000502971 TTKP33981 857 aa20.38■□□□□ 0.85
PTPN13-205ENST00000502971 ZNF136P52737 540 aa20.38■□□□□ 0.85
PTPN13-205ENST00000502971 PSMD4P55036 377 aaKnown RBP20.38■□□□□ 0.85
PTPN13-205ENST00000502971 CDC42P60953 191 aa20.38■□□□□ 0.85
PTPN13-205ENST00000502971 ELAVL1Q15717 326 aaKnown RBP20.38■□□□□ 0.85
PTPN13-205ENST00000502971 ZSWIM7Q19AV6 140 aa20.38■□□□□ 0.85
PTPN13-205ENST00000502971 ZBED5Q49AG3 693 aa20.38■□□□□ 0.85
PTPN13-205ENST00000502971 PLA2G2CQ5R387 149 aa20.38■□□□□ 0.85
PTPN13-205ENST00000502971 ZER1Q7Z7L7 766 aa20.38■□□□□ 0.85
PTPN13-205ENST00000502971 RCBTB1Q8NDN9 531 aa20.38■□□□□ 0.85
PTPN13-205ENST00000502971 OR4N2Q8NGD1 307 aa20.38■□□□□ 0.85
PTPN13-205ENST00000502971 RHOXF1Q8NHV9 184 aa20.38■□□□□ 0.85
PTPN13-205ENST00000502971 APH1BQ8WW43 257 aa20.38■□□□□ 0.85
PTPN13-205ENST00000502971 TSLPQ969D9 159 aa20.38■□□□□ 0.85
PTPN13-205ENST00000502971 TMIGD2Q96BF3 282 aa20.38■□□□□ 0.85
PTPN13-205ENST00000502971 SLC41A3Q96GZ6 507 aa20.38■□□□□ 0.85
PTPN13-205ENST00000502971 OR6C1Q96RD1 312 aa20.38■□□□□ 0.85
PTPN13-205ENST00000502971 GTPBP2Q9BX10 602 aaKnown RBP20.38■□□□□ 0.85
PTPN13-205ENST00000502971 ARRDC1-AS1Q9H2J1 176 aa20.38■□□□□ 0.85
PTPN13-205ENST00000502971 POLR1BQ9H9Y6 1135 aa20.38■□□□□ 0.85
PTPN13-205ENST00000502971 RARRES3Q9UL19 164 aa20.38■□□□□ 0.85
PTPN13-205ENST00000502971 CBLCQ9ULV8 474 aa20.38■□□□□ 0.85
PTPN13-205ENST00000502971 CFL2Q9Y281 166 aa20.38■□□□□ 0.85
PTPN13-205ENST00000502971 NUP210LQ5VU65 1888 aa20.38■□□□□ 0.85
PTPN13-205ENST00000502971 A0A087WUU8 490 aa20.37■□□□□ 0.85
PTPN13-205ENST00000502971 KHNYNO15037 678 aaKnown RBP20.37■□□□□ 0.85
PTPN13-205ENST00000502971 MRPS14O60783 128 aaKnown RBP20.37■□□□□ 0.85
PTPN13-205ENST00000502971 WBP4O75554 376 aaKnown RBP20.37■□□□□ 0.85
PTPN13-205ENST00000502971 IGKV1D-16P01601 117 aa20.37■□□□□ 0.85
PTPN13-205ENST00000502971 ATXN8OSP0DMR3 200 aa20.37■□□□□ 0.85
PTPN13-205ENST00000502971 GSTM3P21266 225 aa20.37■□□□□ 0.85
PTPN13-205ENST00000502971 MMP11P24347 488 aa20.37■□□□□ 0.85
PTPN13-205ENST00000502971 IDH2P48735 452 aaKnown RBP20.37■□□□□ 0.85
PTPN13-205ENST00000502971 HOXC5Q00444 222 aa20.37■□□□□ 0.85
PTPN13-205ENST00000502971 DECR1Q16698 335 aa20.37■□□□□ 0.85
PTPN13-205ENST00000502971 CNPY1Q3B7I2 92 aa20.37■□□□□ 0.85
PTPN13-205ENST00000502971 VWA2Q5GFL6 755 aa20.37■□□□□ 0.85
PTPN13-205ENST00000502971 GDF7Q7Z4P5 450 aa20.37■□□□□ 0.85
PTPN13-205ENST00000502971 ZAR1Q86SH2 424 aa20.37■□□□□ 0.85
PTPN13-205ENST00000502971 GNPDA2Q8TDQ7 276 aa20.37■□□□□ 0.85
PTPN13-205ENST00000502971 UBE2FQ969M7 185 aa20.37■□□□□ 0.85
PTPN13-205ENST00000502971 SLC46A1Q96NT5 459 aa20.37■□□□□ 0.85
PTPN13-205ENST00000502971 TUBA1CQ9BQE3 449 aa20.37■□□□□ 0.85
PTPN13-205ENST00000502971 ITPAQ9BY32 194 aa20.37■□□□□ 0.85
PTPN13-205ENST00000502971 TGIF2Q9GZN2 237 aa20.37■□□□□ 0.85
PTPN13-205ENST00000502971 DUSP21Q9H596 190 aa20.37■□□□□ 0.85
PTPN13-205ENST00000502971 SNX5Q9Y5X3 404 aa20.37■□□□□ 0.85
PTPN13-205ENST00000502971 CLCA3PQ9Y6N3 262 aa20.37■□□□□ 0.85
PTPN13-205ENST00000502971 VPS13AQ96RL7 3174 aa20.36■□□□□ 0.85
PTPN13-205ENST00000502971 XPNPEP2O43895 674 aa20.36■□□□□ 0.85
PTPN13-205ENST00000502971 MPZL2O60487 215 aa20.36■□□□□ 0.85
PTPN13-205ENST00000502971 DRD5P21918 477 aa20.36■□□□□ 0.85
PTPN13-205ENST00000502971 RFX3P48380 749 aa20.36■□□□□ 0.85
PTPN13-205ENST00000502971 SLC37A1P57057 533 aa20.36■□□□□ 0.85
PTPN13-205ENST00000502971 ZNF141Q15928 474 aa20.36■□□□□ 0.85
PTPN13-205ENST00000502971 GRAMD2AQ8IUY3 354 aa20.36■□□□□ 0.85
PTPN13-205ENST00000502971 P3H2Q8IVL5 708 aa20.36■□□□□ 0.85
PTPN13-205ENST00000502971 SPARTQ8N0X7 666 aa20.36■□□□□ 0.85
PTPN13-205ENST00000502971 PLPP5Q8NEB5 264 aa20.36■□□□□ 0.85
PTPN13-205ENST00000502971 IPCEF1Q8WWN9 437 aaPredicted RBP20.36■□□□□ 0.85
PTPN13-205ENST00000502971 ACOT11Q8WXI4 607 aaPredicted RBP20.36■□□□□ 0.85
PTPN13-205ENST00000502971 ART5Q96L15 291 aa20.36■□□□□ 0.85
PTPN13-205ENST00000502971 GFM1Q96RP9 751 aaKnown RBP20.36■□□□□ 0.85
PTPN13-205ENST00000502971 NODALQ96S42 347 aa20.36■□□□□ 0.85
PTPN13-205ENST00000502971 CCNB1IP1Q9NPC3 277 aa20.36■□□□□ 0.85
PTPN13-205ENST00000502971 ST6GALNAC1Q9NSC7 600 aaPredicted RBP20.36■□□□□ 0.85
PTPN13-205ENST00000502971 IMPAD1Q9NX62 359 aa20.36■□□□□ 0.85
PTPN13-205ENST00000502971 AASSQ9UDR5 926 aa20.36■□□□□ 0.85
PTPN13-205ENST00000502971 TESQ9UGI8 421 aaKnown RBP20.36■□□□□ 0.85
PTPN13-205ENST00000502971 OR10H1Q9Y4A9 318 aa20.36■□□□□ 0.85
PTPN13-205ENST00000502971 CEPT1Q9Y6K0 416 aa20.36■□□□□ 0.85
PTPN13-205ENST00000502971 PTGES3LE9PB15 166 aa20.36■□□□□ 0.85
PTPN13-205ENST00000502971 DMDP11532 3685 aa20.36■□□□□ 0.85
PTPN13-205ENST00000502971 RORAP35398 523 aa20.36■□□□□ 0.85
PTPN13-205ENST00000502971 GSSP48637 474 aa20.36■□□□□ 0.85
PTPN13-205ENST00000502971 SLC35A2P78381 396 aa20.36■□□□□ 0.85
PTPN13-205ENST00000502971 CPEB4Q17RY0 729 aaKnown RBP eCLIP20.36■□□□□ 0.85
PTPN13-205ENST00000502971 ZNF730Q6ZMV8 503 aa20.36■□□□□ 0.85
PTPN13-205ENST00000502971 RRM2BQ7LG56 351 aa20.36■□□□□ 0.85
PTPN13-205ENST00000502971 SLC35B4Q969S0 331 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms