RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 ABHD17AQ96GS6 310 aa12.46□□□□□ -0.41
CPNE1-227ENST00000498056 NODALQ96S42 347 aa12.46□□□□□ -0.41
CPNE1-227ENST00000498056 OSBPL11Q9BXB4 747 aa12.46□□□□□ -0.41
CPNE1-227ENST00000498056 HES7Q9BYE0 225 aa12.46□□□□□ -0.41
CPNE1-227ENST00000498056 TBL1XR1Q9BZK7 514 aa12.46□□□□□ -0.41
CPNE1-227ENST00000498056 TIMMDC1Q9NPL8 285 aa12.46□□□□□ -0.41
CPNE1-227ENST00000498056 KLHL1Q9NR64 748 aa12.46□□□□□ -0.41
CPNE1-227ENST00000498056 RYDENQ9NUL5 291 aaKnown RBP12.46□□□□□ -0.41
CPNE1-227ENST00000498056 EGFL7Q9UHF1 273 aa12.46□□□□□ -0.41
CPNE1-227ENST00000498056 CHCHD2Q9Y6H1 151 aaPredicted RBP12.46□□□□□ -0.41
CPNE1-227ENST00000498056 ZZEF1O43149 2961 aa12.46□□□□□ -0.42
CPNE1-227ENST00000498056 DSPP15924 2871 aaKnown RBP12.45□□□□□ -0.42
CPNE1-227ENST00000498056 DSPPQ9NZW4 1301 aa12.45□□□□□ -0.42
CPNE1-227ENST00000498056 K7EM74 188 aa12.45□□□□□ -0.42
CPNE1-227ENST00000498056 NEURL1O76050 574 aa12.45□□□□□ -0.42
CPNE1-227ENST00000498056 PDE9AO76083 593 aa12.45□□□□□ -0.42
CPNE1-227ENST00000498056 PGM3O95394 542 aa12.45□□□□□ -0.42
CPNE1-227ENST00000498056 P04436 131 aa12.45□□□□□ -0.42
CPNE1-227ENST00000498056 HSD17B1P14061 328 aa12.45□□□□□ -0.42
CPNE1-227ENST00000498056 NCK1P16333 377 aa12.45□□□□□ -0.42
CPNE1-227ENST00000498056 KCNJ2P63252 427 aa12.45□□□□□ -0.42
CPNE1-227ENST00000498056 PDZK1Q5T2W1 519 aa12.45□□□□□ -0.42
CPNE1-227ENST00000498056 SPINK14Q6IE38 97 aa12.45□□□□□ -0.42
CPNE1-227ENST00000498056 IGFL2Q6UWQ7 119 aa12.45□□□□□ -0.42
CPNE1-227ENST00000498056 ASB18Q6ZVZ8 466 aa12.45□□□□□ -0.42
CPNE1-227ENST00000498056 NUP54Q7Z3B4 507 aa12.45□□□□□ -0.42
CPNE1-227ENST00000498056 MDGA2Q7Z553 956 aa12.45□□□□□ -0.42
CPNE1-227ENST00000498056 KRT73Q86Y46 540 aa12.45□□□□□ -0.42
CPNE1-227ENST00000498056 ARHGAP24Q8N264 748 aa12.45□□□□□ -0.42
CPNE1-227ENST00000498056 FBXW8Q8N3Y1 598 aa12.45□□□□□ -0.42
CPNE1-227ENST00000498056 METTL25Q8N6Q8 603 aa12.45□□□□□ -0.42
CPNE1-227ENST00000498056 MDS2Q8NDY4 140 aa12.45□□□□□ -0.42
CPNE1-227ENST00000498056 TNIP2Q8NFZ5 429 aa12.45□□□□□ -0.42
CPNE1-227ENST00000498056 SPPL2AQ8TCT8 520 aa12.45□□□□□ -0.42
CPNE1-227ENST00000498056 WDR60Q8WVS4 1066 aa12.45□□□□□ -0.42
CPNE1-227ENST00000498056 TTC9Q92623 222 aa12.45□□□□□ -0.42
CPNE1-227ENST00000498056 ADNPQ9H2P0 1102 aa12.45□□□□□ -0.42
CPNE1-227ENST00000498056 TRIM45Q9H8W5 580 aaPredicted RBP12.45□□□□□ -0.42
CPNE1-227ENST00000498056 GALNT9Q9HCQ5 603 aa12.45□□□□□ -0.42
CPNE1-227ENST00000498056 ZNF71Q9NQZ8 489 aaPredicted RBP12.45□□□□□ -0.42
CPNE1-227ENST00000498056 SACM1LQ9NTJ5 587 aa12.45□□□□□ -0.42
CPNE1-227ENST00000498056 ABCG2Q9UNQ0 655 aa12.45□□□□□ -0.42
CPNE1-227ENST00000498056 MPDZO75970 2070 aa12.45□□□□□ -0.42
CPNE1-227ENST00000498056 ATMQ13315 3056 aa12.44□□□□□ -0.42
CPNE1-227ENST00000498056 A0A0G2JMM0 328 aa12.44□□□□□ -0.42
CPNE1-227ENST00000498056 A0A0G2JPF8 293 aa12.44□□□□□ -0.42
CPNE1-227ENST00000498056 A0A1W2PPB8 328 aa12.44□□□□□ -0.42
CPNE1-227ENST00000498056 A0A1W2PRS3 328 aa12.44□□□□□ -0.42
CPNE1-227ENST00000498056 KIR3DP1A8MWS1 328 aa12.44□□□□□ -0.42
CPNE1-227ENST00000498056 HNRNPCL2B2RXH8 293 aa12.44□□□□□ -0.42
CPNE1-227ENST00000498056 HNRNPCL3B7ZW38 293 aa12.44□□□□□ -0.42
CPNE1-227ENST00000498056 CXCR6O00574 342 aa12.44□□□□□ -0.42
CPNE1-227ENST00000498056 ARPC2O15144 300 aa12.44□□□□□ -0.42
CPNE1-227ENST00000498056 DPM1O60762 260 aa12.44□□□□□ -0.42
CPNE1-227ENST00000498056 GMNNO75496 209 aa12.44□□□□□ -0.42
CPNE1-227ENST00000498056 SORBS2O94875 1100 aaKnown RBP12.44□□□□□ -0.42
CPNE1-227ENST00000498056 HNRNPCL4P0DMR1 293 aa12.44□□□□□ -0.42
CPNE1-227ENST00000498056 CD46P15529 392 aa12.44□□□□□ -0.42
CPNE1-227ENST00000498056 HTR1EP28566 365 aa12.44□□□□□ -0.42
CPNE1-227ENST00000498056 LCN1P31025 176 aa12.44□□□□□ -0.42
CPNE1-227ENST00000498056 MSX2P35548 267 aaPredicted RBP12.44□□□□□ -0.42
CPNE1-227ENST00000498056 PGM1P36871 562 aa12.44□□□□□ -0.42
CPNE1-227ENST00000498056 CLK3P49761 638 aaKnown RBP12.44□□□□□ -0.42
CPNE1-227ENST00000498056 TNFSF10P50591 281 aa12.44□□□□□ -0.42
CPNE1-227ENST00000498056 ATP12AP54707 1039 aa12.44□□□□□ -0.42
CPNE1-227ENST00000498056 GPR85P60893 370 aa12.44□□□□□ -0.42
CPNE1-227ENST00000498056 BNIP2Q12982 314 aa12.44□□□□□ -0.42
CPNE1-227ENST00000498056 LIN52Q52LA3 116 aa12.44□□□□□ -0.42
CPNE1-227ENST00000498056 ZNF766Q5HY98 468 aa12.44□□□□□ -0.42
CPNE1-227ENST00000498056 PRAMEF8Q5VWM4 474 aa12.44□□□□□ -0.42
CPNE1-227ENST00000498056 PRAMEF7Q5VXH5 474 aa12.44□□□□□ -0.42
CPNE1-227ENST00000498056 SLC22A10Q63ZE4 541 aa12.44□□□□□ -0.42
CPNE1-227ENST00000498056 ZNF227Q86WZ6 799 aa12.44□□□□□ -0.42
CPNE1-227ENST00000498056 HPS6Q86YV9 775 aa12.44□□□□□ -0.42
CPNE1-227ENST00000498056 PEX5LQ8IYB4 626 aa12.44□□□□□ -0.42
CPNE1-227ENST00000498056 ULK2Q8IYT8 1036 aa12.44□□□□□ -0.42
CPNE1-227ENST00000498056 TMCO5AQ8N6Q1 288 aa12.44□□□□□ -0.42
CPNE1-227ENST00000498056 POGLUT1Q8NBL1 392 aa12.44□□□□□ -0.42
CPNE1-227ENST00000498056 CATSPER1Q8NEC5 780 aa12.44□□□□□ -0.42
CPNE1-227ENST00000498056 SLC26A7Q8TE54 656 aa12.44□□□□□ -0.42
CPNE1-227ENST00000498056 GRHL3Q8TE85 626 aa12.44□□□□□ -0.42
CPNE1-227ENST00000498056 PAQR8Q8TEZ7 354 aa12.44□□□□□ -0.42
CPNE1-227ENST00000498056 FAM162AQ96A26 154 aa12.44□□□□□ -0.42
CPNE1-227ENST00000498056 SGCZQ96LD1 299 aa12.44□□□□□ -0.42
CPNE1-227ENST00000498056 ZNF607Q96SK3 696 aa12.44□□□□□ -0.42
CPNE1-227ENST00000498056 DOHHQ9BU89 302 aa12.44□□□□□ -0.42
CPNE1-227ENST00000498056 CADM1Q9BY67 442 aaKnown RBP12.44□□□□□ -0.42
CPNE1-227ENST00000498056 MFRPQ9BY79 579 aa12.44□□□□□ -0.42
CPNE1-227ENST00000498056 UBQLN4Q9NRR5 601 aa12.44□□□□□ -0.42
CPNE1-227ENST00000498056 SUCOQ9UBS9 1254 aaKnown RBP12.44□□□□□ -0.42
CPNE1-227ENST00000498056 SEC14L3Q9UDX4 400 aa12.44□□□□□ -0.42
CPNE1-227ENST00000498056 MAGEL2Q9UJ55 1249 aa12.44□□□□□ -0.42
CPNE1-227ENST00000498056 CNOT11Q9UKZ1 510 aaKnown RBP12.44□□□□□ -0.42
CPNE1-227ENST00000498056 ZNF443Q9Y2A4 671 aaPredicted RBP12.44□□□□□ -0.42
CPNE1-227ENST00000498056 KLF13Q9Y2Y9 288 aaPredicted RBP12.44□□□□□ -0.42
CPNE1-227ENST00000498056 PCDHGB7Q9Y5F8 929 aa12.44□□□□□ -0.42
CPNE1-227ENST00000498056 TRAV17A0A0B4J275 112 aa12.43□□□□□ -0.42
CPNE1-227ENST00000498056 ERVH48-1M5A8F1 160 aa12.43□□□□□ -0.42
CPNE1-227ENST00000498056 GMFGO60234 142 aa12.43□□□□□ -0.42
CPNE1-227ENST00000498056 NME2P1O60361 137 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms