RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 GALR3O60755 368 aaPredicted RBP10.31□□□□□ -0.76
CMSS1-208ENST00000496116 IL1AP01583 271 aa10.31□□□□□ -0.76
CMSS1-208ENST00000496116 THY1P04216 161 aa10.31□□□□□ -0.76
CMSS1-208ENST00000496116 NID1P14543 1247 aa10.31□□□□□ -0.76
CMSS1-208ENST00000496116 PVRP15151 417 aa10.31□□□□□ -0.76
CMSS1-208ENST00000496116 GAS1P54826 345 aa10.31□□□□□ -0.76
CMSS1-208ENST00000496116 SHC2P98077 582 aa10.31□□□□□ -0.76
CMSS1-208ENST00000496116 DSG2Q14126 1118 aa10.31□□□□□ -0.76
CMSS1-208ENST00000496116 PGGHGQ32M88 737 aa10.31□□□□□ -0.76
CMSS1-208ENST00000496116 RNF113BQ8IZP6 322 aaKnown RBP10.31□□□□□ -0.76
CMSS1-208ENST00000496116 SLC22A18ASQ8N1D0 253 aa10.31□□□□□ -0.76
CMSS1-208ENST00000496116 SIMC1Q8NDZ2 872 aa10.31□□□□□ -0.76
CMSS1-208ENST00000496116 GPR151Q8TDV0 419 aa10.31□□□□□ -0.76
CMSS1-208ENST00000496116 IL21RQ9HBE5 538 aa10.31□□□□□ -0.76
CMSS1-208ENST00000496116 SNTG1Q9NSN8 517 aa10.31□□□□□ -0.76
CMSS1-208ENST00000496116 TXNL4BQ9NX01 149 aaKnown RBP10.31□□□□□ -0.76
CMSS1-208ENST00000496116 QPCTLQ9NXS2 382 aa10.31□□□□□ -0.76
CMSS1-208ENST00000496116 CARD8Q9Y2G2 431 aa10.31□□□□□ -0.76
CMSS1-208ENST00000496116 NTNG1Q9Y2I2 539 aa10.31□□□□□ -0.76
CMSS1-208ENST00000496116 MRPS2Q9Y399 296 aaKnown RBP10.31□□□□□ -0.76
CMSS1-208ENST00000496116 XIRP2A4UGR9 3374 aa10.31□□□□□ -0.76
CMSS1-208ENST00000496116 MN1Q10571 1320 aaPredicted RBP10.31□□□□□ -0.76
CMSS1-208ENST00000496116 CYR61O00622 381 aa10.31□□□□□ -0.76
CMSS1-208ENST00000496116 SLC30A4O14863 429 aa10.31□□□□□ -0.76
CMSS1-208ENST00000496116 SOX30O94993 753 aa10.31□□□□□ -0.76
CMSS1-208ENST00000496116 DLGAP3O95886 979 aa10.31□□□□□ -0.76
CMSS1-208ENST00000496116 CH25HO95992 272 aa10.31□□□□□ -0.76
CMSS1-208ENST00000496116 APOA1P02647 267 aa10.31□□□□□ -0.76
CMSS1-208ENST00000496116 CTSEP14091 401 aa10.31□□□□□ -0.76
CMSS1-208ENST00000496116 RPS4Y1P22090 263 aaKnown RBP10.31□□□□□ -0.76
CMSS1-208ENST00000496116 GTF2E2P29084 291 aaKnown RBP10.31□□□□□ -0.76
CMSS1-208ENST00000496116 LSSP48449 732 aa10.31□□□□□ -0.76
CMSS1-208ENST00000496116 ZNF136P52737 540 aa10.31□□□□□ -0.76
CMSS1-208ENST00000496116 TFF2Q03403 129 aa10.31□□□□□ -0.76
CMSS1-208ENST00000496116 PRICKLE4Q2TBC4 344 aa10.31□□□□□ -0.76
CMSS1-208ENST00000496116 PLK5Q496M5 336 aa10.31□□□□□ -0.76
CMSS1-208ENST00000496116 EXOSC6Q5RKV6 272 aaKnown RBP10.31□□□□□ -0.76
CMSS1-208ENST00000496116 NXNL2Q5VZ03 156 aa10.31□□□□□ -0.76
CMSS1-208ENST00000496116 ARMC6Q6NXE6 501 aa10.31□□□□□ -0.76
CMSS1-208ENST00000496116 PRSS41Q7RTY9 318 aa10.31□□□□□ -0.76
CMSS1-208ENST00000496116 TAF8Q7Z7C8 310 aa10.31□□□□□ -0.76
CMSS1-208ENST00000496116 EGFL6Q8IUX8 553 aa10.31□□□□□ -0.76
CMSS1-208ENST00000496116 TMEFF1Q8IYR6 380 aa10.31□□□□□ -0.76
CMSS1-208ENST00000496116 CA13Q8N1Q1 262 aa10.31□□□□□ -0.76
CMSS1-208ENST00000496116 POGLUT1Q8NBL1 392 aa10.31□□□□□ -0.76
CMSS1-208ENST00000496116 GALNT6Q8NCL4 622 aa10.31□□□□□ -0.76
CMSS1-208ENST00000496116 FAM83FQ8NEG4 500 aaPredicted RBP10.31□□□□□ -0.76
CMSS1-208ENST00000496116 OR52L1Q8NGH7 329 aa10.31□□□□□ -0.76
CMSS1-208ENST00000496116 SLC37A2Q8TED4 501 aa10.31□□□□□ -0.76
CMSS1-208ENST00000496116 GATAD2BQ8WXI9 593 aa10.31□□□□□ -0.76
CMSS1-208ENST00000496116 HTRA1Q92743 480 aa10.31□□□□□ -0.76
CMSS1-208ENST00000496116 KCTD7Q96MP8 289 aa10.31□□□□□ -0.76
CMSS1-208ENST00000496116 TMEM74BQ9NUR3 256 aa10.31□□□□□ -0.76
CMSS1-208ENST00000496116 EVA1BQ9NVM1 165 aa10.31□□□□□ -0.76
CMSS1-208ENST00000496116 USP36Q9P275 1121 aaKnown RBP10.31□□□□□ -0.76
CMSS1-208ENST00000496116 UNC80Q8N2C7 3258 aa10.3□□□□□ -0.76
CMSS1-208ENST00000496116 IQCMA0A1B0GVH7 501 aa10.3□□□□□ -0.76
CMSS1-208ENST00000496116 CHST10O43529 356 aa10.3□□□□□ -0.76
CMSS1-208ENST00000496116 PIP5K1CO60331 668 aa10.3□□□□□ -0.76
CMSS1-208ENST00000496116 FMO6PO60774 539 aa10.3□□□□□ -0.76
CMSS1-208ENST00000496116 CDRT1O95170 752 aa10.3□□□□□ -0.76
CMSS1-208ENST00000496116 APOL3O95236 402 aa10.3□□□□□ -0.76
CMSS1-208ENST00000496116 NTN1O95631 604 aa10.3□□□□□ -0.76
CMSS1-208ENST00000496116 TNFSF8P32971 234 aa10.3□□□□□ -0.76
CMSS1-208ENST00000496116 SOX18P35713 384 aa10.3□□□□□ -0.76
CMSS1-208ENST00000496116 GCGRP47871 477 aa10.3□□□□□ -0.76
CMSS1-208ENST00000496116 CCR5P51681 352 aa10.3□□□□□ -0.76
CMSS1-208ENST00000496116 RAB38P57729 211 aa10.3□□□□□ -0.76
CMSS1-208ENST00000496116 VSX2P58304 361 aaPredicted RBP10.3□□□□□ -0.76
CMSS1-208ENST00000496116 POU6F2P78424 691 aaPredicted RBP10.3□□□□□ -0.76
CMSS1-208ENST00000496116 TPBGQ13641 420 aa10.3□□□□□ -0.76
CMSS1-208ENST00000496116 MRPL2Q5T653 305 aaKnown RBP10.3□□□□□ -0.76
CMSS1-208ENST00000496116 OR2G6Q5TZ20 316 aa10.3□□□□□ -0.76
CMSS1-208ENST00000496116 AADACL4Q5VUY2 407 aa10.3□□□□□ -0.76
CMSS1-208ENST00000496116 GALNT12Q8IXK2 581 aa10.3□□□□□ -0.76
CMSS1-208ENST00000496116 RBM12BQ8IXT5 1001 aaKnown RBP10.3□□□□□ -0.76
CMSS1-208ENST00000496116 ZBTB8BQ8NAP8 495 aaPredicted RBP10.3□□□□□ -0.76
CMSS1-208ENST00000496116 SMRP1Q8NCR6 262 aa10.3□□□□□ -0.76
CMSS1-208ENST00000496116 OR4Q3Q8NH05 313 aa10.3□□□□□ -0.76
CMSS1-208ENST00000496116 SLC25A46Q96AG3 418 aa10.3□□□□□ -0.76
CMSS1-208ENST00000496116 TRMT61AQ96FX7 289 aaKnown RBP10.3□□□□□ -0.76
CMSS1-208ENST00000496116 MSLNLQ96KJ4 702 aa10.3□□□□□ -0.76
CMSS1-208ENST00000496116 SCN2AQ99250 2005 aa10.3□□□□□ -0.76
CMSS1-208ENST00000496116 CD180Q99467 661 aa10.3□□□□□ -0.76
CMSS1-208ENST00000496116 ARHGAP9Q9BRR9 750 aa10.3□□□□□ -0.76
CMSS1-208ENST00000496116 EVA1AQ9H8M9 152 aa10.3□□□□□ -0.76
CMSS1-208ENST00000496116 POLE3Q9NRF9 147 aa10.3□□□□□ -0.76
CMSS1-208ENST00000496116 MAT2BQ9NZL9 334 aa10.3□□□□□ -0.76
CMSS1-208ENST00000496116 FBXL21Q9UKT6 434 aa10.3□□□□□ -0.76
CMSS1-208ENST00000496116 TRAPPC4Q9Y296 219 aa10.3□□□□□ -0.76
CMSS1-208ENST00000496116 GSTK1Q9Y2Q3 226 aa10.3□□□□□ -0.76
CMSS1-208ENST00000496116 SPTY2D1-AS1A0A0U1RR47 76 aa10.3□□□□□ -0.76
CMSS1-208ENST00000496116 CDHR4A6H8M9 788 aa10.3□□□□□ -0.76
CMSS1-208ENST00000496116 OR5K3A6NET4 321 aa10.3□□□□□ -0.76
CMSS1-208ENST00000496116 UNC119BA6NIH7 251 aa10.3□□□□□ -0.76
CMSS1-208ENST00000496116 COQ9O75208 318 aa10.3□□□□□ -0.76
CMSS1-208ENST00000496116 IGHV4-34P06331 123 aa10.3□□□□□ -0.76
CMSS1-208ENST00000496116 IMPDH2P12268 514 aa10.3□□□□□ -0.76
CMSS1-208ENST00000496116 BMP7P18075 431 aa10.3□□□□□ -0.76
CMSS1-208ENST00000496116 HTR1FP30939 366 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms