RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 A0A1W2PRB8 838 aa11.51□□□□□ -0.57
PTPRF-214ENST00000496043 OR2M5A3KFT3 312 aa11.51□□□□□ -0.57
PTPRF-214ENST00000496043 SLC22A20A6NK97 555 aa11.51□□□□□ -0.57
PTPRF-214ENST00000496043 A8MXE2 369 aa11.51□□□□□ -0.57
PTPRF-214ENST00000496043 CTIFO43310 598 aaKnown RBP11.51□□□□□ -0.57
PTPRF-214ENST00000496043 NDUFB5O43674 189 aa11.51□□□□□ -0.57
PTPRF-214ENST00000496043 LYPLA1O75608 230 aaPredicted RBP11.51□□□□□ -0.57
PTPRF-214ENST00000496043 TGM6O95932 706 aa11.51□□□□□ -0.57
PTPRF-214ENST00000496043 BPGMP07738 259 aa11.51□□□□□ -0.57
PTPRF-214ENST00000496043 ALOX5P09917 674 aa11.51□□□□□ -0.57
PTPRF-214ENST00000496043 TBXA2RP21731 343 aa11.51□□□□□ -0.57
PTPRF-214ENST00000496043 LCN1P31025 176 aa11.51□□□□□ -0.57
PTPRF-214ENST00000496043 HPCAL1P37235 193 aa11.51□□□□□ -0.57
PTPRF-214ENST00000496043 CPA2P48052 419 aa11.51□□□□□ -0.57
PTPRF-214ENST00000496043 SERPINB4P48594 390 aa11.51□□□□□ -0.57
PTPRF-214ENST00000496043 PRIM2P49643 509 aa11.51□□□□□ -0.57
PTPRF-214ENST00000496043 IST1P53990 364 aa11.51□□□□□ -0.57
PTPRF-214ENST00000496043 C6orf136Q5SQH8 315 aa11.51□□□□□ -0.57
PTPRF-214ENST00000496043 FBXW10Q5XX13 1052 aa11.51□□□□□ -0.57
PTPRF-214ENST00000496043 APOOLQ6UXV4 268 aa11.51□□□□□ -0.57
PTPRF-214ENST00000496043 ZCCHC23Q6ZST2 131 aa11.51□□□□□ -0.57
PTPRF-214ENST00000496043 CDC20BQ86Y33 519 aa11.51□□□□□ -0.57
PTPRF-214ENST00000496043 NUDCD3Q8IVD9 361 aa11.51□□□□□ -0.57
PTPRF-214ENST00000496043 GCNT2Q8N0V5 402 aa11.51□□□□□ -0.57
PTPRF-214ENST00000496043 SLC16A11Q8NCK7 471 aa11.51□□□□□ -0.57
PTPRF-214ENST00000496043 OR4C3Q8NH37 302 aa11.51□□□□□ -0.57
PTPRF-214ENST00000496043 AGR3Q8TD06 166 aa11.51□□□□□ -0.57
PTPRF-214ENST00000496043 NRGNQ92686 78 aa11.51□□□□□ -0.57
PTPRF-214ENST00000496043 NINJ1Q92982 152 aa11.51□□□□□ -0.57
PTPRF-214ENST00000496043 CAVIN3Q969G5 261 aa11.51□□□□□ -0.57
PTPRF-214ENST00000496043 GIMAP5Q96F15 307 aa11.51□□□□□ -0.57
PTPRF-214ENST00000496043 C16orf58Q96GQ5 468 aa11.51□□□□□ -0.57
PTPRF-214ENST00000496043 MS4A4EQ96PG1 132 aa11.51□□□□□ -0.57
PTPRF-214ENST00000496043 PRPF18Q99633 342 aaKnown RBP11.51□□□□□ -0.57
PTPRF-214ENST00000496043 ZDHHC2Q9UIJ5 367 aa11.51□□□□□ -0.57
PTPRF-214ENST00000496043 PACSIN3Q9UKS6 424 aa11.51□□□□□ -0.57
PTPRF-214ENST00000496043 AP4B1Q9Y6B7 739 aa11.51□□□□□ -0.57
PTPRF-214ENST00000496043 SPG11Q96JI7 2443 aa11.5□□□□□ -0.57
PTPRF-214ENST00000496043 OTOGQ6ZRI0 2925 aa11.5□□□□□ -0.57
PTPRF-214ENST00000496043 A0A1W2PNV4 684 aa11.5□□□□□ -0.57
PTPRF-214ENST00000496043 ALG1L2C9J202 215 aa11.5□□□□□ -0.57
PTPRF-214ENST00000496043 CASKO14936 926 aa11.5□□□□□ -0.57
PTPRF-214ENST00000496043 SCAMP2O15127 329 aaKnown RBP11.5□□□□□ -0.57
PTPRF-214ENST00000496043 SOX30O94993 753 aa11.5□□□□□ -0.57
PTPRF-214ENST00000496043 KCNK2O95069 426 aa11.5□□□□□ -0.57
PTPRF-214ENST00000496043 GOSR1O95249 250 aa11.5□□□□□ -0.57
PTPRF-214ENST00000496043 HSPA4LO95757 839 aa11.5□□□□□ -0.57
PTPRF-214ENST00000496043 NGFRP08138 427 aa11.5□□□□□ -0.57
PTPRF-214ENST00000496043 ACP2P11117 423 aa11.5□□□□□ -0.57
PTPRF-214ENST00000496043 HPGDP15428 266 aa11.5□□□□□ -0.57
PTPRF-214ENST00000496043 CREB1P16220 341 aa11.5□□□□□ -0.57
PTPRF-214ENST00000496043 EFNA1P20827 205 aaPredicted RBP11.5□□□□□ -0.57
PTPRF-214ENST00000496043 DNASE1P24855 282 aa11.5□□□□□ -0.57
PTPRF-214ENST00000496043 SUCLG1P53597 346 aaKnown RBP11.5□□□□□ -0.57
PTPRF-214ENST00000496043 CLDN15P56746 228 aa11.5□□□□□ -0.57
PTPRF-214ENST00000496043 RPS3AP61247 264 aaKnown RBP11.5□□□□□ -0.57
PTPRF-214ENST00000496043 DUSP5Q16690 384 aa11.5□□□□□ -0.57
PTPRF-214ENST00000496043 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.5□□□□□ -0.57
PTPRF-214ENST00000496043 LSM12Q3MHD2 195 aaKnown RBP11.5□□□□□ -0.57
PTPRF-214ENST00000496043 XKR7Q5GH72 579 aa11.5□□□□□ -0.57
PTPRF-214ENST00000496043 CPTPQ5TA50 214 aa11.5□□□□□ -0.57
PTPRF-214ENST00000496043 IL23RQ5VWK5 629 aa11.5□□□□□ -0.57
PTPRF-214ENST00000496043 MFSD12Q6NUT3 480 aa11.5□□□□□ -0.57
PTPRF-214ENST00000496043 FIGNL1Q6PIW4 674 aa11.5□□□□□ -0.57
PTPRF-214ENST00000496043 OR7A2PQ8NGA2 310 aa11.5□□□□□ -0.57
PTPRF-214ENST00000496043 OR5M1Q8NGP8 315 aa11.5□□□□□ -0.57
PTPRF-214ENST00000496043 PPP1R14CQ8TAE6 165 aa11.5□□□□□ -0.57
PTPRF-214ENST00000496043 OR5P2Q8WZ92 322 aa11.5□□□□□ -0.57
PTPRF-214ENST00000496043 C3orf30Q96M34 536 aa11.5□□□□□ -0.57
PTPRF-214ENST00000496043 DACH2Q96NX9 599 aa11.5□□□□□ -0.57
PTPRF-214ENST00000496043 YIPF4Q9BSR8 244 aa11.5□□□□□ -0.57
PTPRF-214ENST00000496043 UBQLN4Q9NRR5 601 aa11.5□□□□□ -0.57
PTPRF-214ENST00000496043 CCM2LQ9NUG4 571 aaPredicted RBP11.5□□□□□ -0.57
PTPRF-214ENST00000496043 ATAD3AQ9NVI7 634 aa11.5□□□□□ -0.57
PTPRF-214ENST00000496043 GIMAP2Q9UG22 337 aa11.5□□□□□ -0.57
PTPRF-214ENST00000496043 NDRG3Q9UGV2 375 aa11.5□□□□□ -0.57
PTPRF-214ENST00000496043 ST6GALNAC2Q9UJ37 374 aa11.5□□□□□ -0.57
PTPRF-214ENST00000496043 EIF3LQ9Y262 564 aaKnown RBP11.5□□□□□ -0.57
PTPRF-214ENST00000496043 TACC2O95359 2948 aa11.49□□□□□ -0.57
PTPRF-214ENST00000496043 A0A087WZY1 265 aa11.49□□□□□ -0.57
PTPRF-214ENST00000496043 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.49□□□□□ -0.57
PTPRF-214ENST00000496043 H0YC42 278 aa11.49□□□□□ -0.57
PTPRF-214ENST00000496043 H3BML4 177 aa11.49□□□□□ -0.57
PTPRF-214ENST00000496043 MSTNO14793 375 aa11.49□□□□□ -0.57
PTPRF-214ENST00000496043 SEC14L5O43304 696 aa11.49□□□□□ -0.57
PTPRF-214ENST00000496043 TYROBPO43914 113 aa11.49□□□□□ -0.57
PTPRF-214ENST00000496043 GMFGO60234 142 aa11.49□□□□□ -0.57
PTPRF-214ENST00000496043 TNFSF13O75888 250 aa11.49□□□□□ -0.57
PTPRF-214ENST00000496043 OXSR1O95747 527 aaPredicted RBP11.49□□□□□ -0.57
PTPRF-214ENST00000496043 LAMP1P11279 417 aa11.49□□□□□ -0.57
PTPRF-214ENST00000496043 CCT3P49368 545 aaKnown RBP11.49□□□□□ -0.57
PTPRF-214ENST00000496043 TPD52P55327 224 aaPredicted RBP11.49□□□□□ -0.57
PTPRF-214ENST00000496043 POU6F2P78424 691 aaPredicted RBP11.49□□□□□ -0.57
PTPRF-214ENST00000496043 OCRLQ01968 901 aa11.49□□□□□ -0.57
PTPRF-214ENST00000496043 MAD2L1Q13257 205 aaPredicted RBP11.49□□□□□ -0.57
PTPRF-214ENST00000496043 SGCBQ16585 318 aa11.49□□□□□ -0.57
PTPRF-214ENST00000496043 GALNT10Q86SR1 603 aa11.49□□□□□ -0.57
PTPRF-214ENST00000496043 MISPQ8IVT2 679 aa11.49□□□□□ -0.57
PTPRF-214ENST00000496043 COX18Q8N8Q8 333 aa11.49□□□□□ -0.57
PTPRF-214ENST00000496043 CNEP1R1Q8N9A8 125 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms