RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 C22orf34Q6ZV56 151 aa10.49□□□□□ -0.73
VTI1A-208ENST00000494728 BTLAQ7Z6A9 289 aa10.49□□□□□ -0.73
VTI1A-208ENST00000494728 TRABD2AQ86V40 505 aa10.49□□□□□ -0.73
VTI1A-208ENST00000494728 TGIF2LYQ8IUE0 185 aa10.49□□□□□ -0.73
VTI1A-208ENST00000494728 KRTAP1-3Q8IUG1 177 aa10.49□□□□□ -0.73
VTI1A-208ENST00000494728 BANPQ8N9N5 519 aa10.49□□□□□ -0.73
VTI1A-208ENST00000494728 GATSQ8NAP1 163 aa10.49□□□□□ -0.73
VTI1A-208ENST00000494728 SLC16A11Q8NCK7 471 aa10.49□□□□□ -0.73
VTI1A-208ENST00000494728 FNDC9Q8TBE3 224 aa10.49□□□□□ -0.73
VTI1A-208ENST00000494728 AGR3Q8TD06 166 aa10.49□□□□□ -0.73
VTI1A-208ENST00000494728 TWIST2Q8WVJ9 160 aa10.49□□□□□ -0.73
VTI1A-208ENST00000494728 SMPDL3BQ92485 455 aa10.49□□□□□ -0.73
VTI1A-208ENST00000494728 SLC9A6Q92581 669 aa10.49□□□□□ -0.73
VTI1A-208ENST00000494728 STARD4Q96DR4 205 aa10.49□□□□□ -0.73
VTI1A-208ENST00000494728 LRRC46Q96FV0 321 aa10.49□□□□□ -0.73
VTI1A-208ENST00000494728 C16orf58Q96GQ5 468 aa10.49□□□□□ -0.73
VTI1A-208ENST00000494728 ZNF764Q96H86 408 aaPredicted RBP10.49□□□□□ -0.73
VTI1A-208ENST00000494728 ZFP3Q96NJ6 502 aa10.49□□□□□ -0.73
VTI1A-208ENST00000494728 FAM111AQ96PZ2 611 aa10.49□□□□□ -0.73
VTI1A-208ENST00000494728 PINK1Q9BXM7 581 aa10.49□□□□□ -0.73
VTI1A-208ENST00000494728 OPN3Q9H1Y3 402 aaPredicted RBP10.49□□□□□ -0.73
VTI1A-208ENST00000494728 REEP4Q9H6H4 257 aa10.49□□□□□ -0.73
VTI1A-208ENST00000494728 SIRT3Q9NTG7 399 aaPredicted RBP10.49□□□□□ -0.73
VTI1A-208ENST00000494728 MKS1Q9NXB0 559 aa10.49□□□□□ -0.73
VTI1A-208ENST00000494728 WBP11Q9Y2W2 641 aaKnown RBP10.49□□□□□ -0.73
VTI1A-208ENST00000494728 TESMINQ9Y4I5 508 aa10.49□□□□□ -0.73
VTI1A-208ENST00000494728 JMJD1CQ15652 2540 aa10.49□□□□□ -0.73
VTI1A-208ENST00000494728 ABCA2Q9BZC7 2435 aa10.48□□□□□ -0.73
VTI1A-208ENST00000494728 IGLV3-32A0A0A0MS00 114 aa10.48□□□□□ -0.73
VTI1A-208ENST00000494728 H3BQF6 201 aa10.48□□□□□ -0.73
VTI1A-208ENST00000494728 SLC28A1O00337 649 aa10.48□□□□□ -0.73
VTI1A-208ENST00000494728 RGS14O43566 566 aa10.48□□□□□ -0.73
VTI1A-208ENST00000494728 TBX19O60806 448 aa10.48□□□□□ -0.73
VTI1A-208ENST00000494728 TRIM13O60858 407 aa10.48□□□□□ -0.73
VTI1A-208ENST00000494728 SPAG7O75391 227 aa10.48□□□□□ -0.73
VTI1A-208ENST00000494728 ANGPTL1O95841 491 aa10.48□□□□□ -0.73
VTI1A-208ENST00000494728 IFI6P09912 130 aa10.48□□□□□ -0.73
VTI1A-208ENST00000494728 BCKDHAP12694 445 aa10.48□□□□□ -0.73
VTI1A-208ENST00000494728 KLK2P20151 261 aa10.48□□□□□ -0.73
VTI1A-208ENST00000494728 KIR2DL2P43627 348 aaPredicted RBP10.48□□□□□ -0.73
VTI1A-208ENST00000494728 NAA20P61599 178 aa10.48□□□□□ -0.73
VTI1A-208ENST00000494728 PRR5P85299 388 aa10.48□□□□□ -0.73
VTI1A-208ENST00000494728 FAM27E3Q08E93 113 aa10.48□□□□□ -0.73
VTI1A-208ENST00000494728 GANABQ14697 944 aaKnown RBP10.48□□□□□ -0.73
VTI1A-208ENST00000494728 PTGR1Q14914 329 aa10.48□□□□□ -0.73
VTI1A-208ENST00000494728 CD226Q15762 336 aa10.48□□□□□ -0.73
VTI1A-208ENST00000494728 BCL2A1Q16548 175 aa10.48□□□□□ -0.73
VTI1A-208ENST00000494728 XKR7Q5GH72 579 aa10.48□□□□□ -0.73
VTI1A-208ENST00000494728 CCNJQ5T5M9 372 aa10.48□□□□□ -0.73
VTI1A-208ENST00000494728 MFSD12Q6NUT3 480 aa10.48□□□□□ -0.73
VTI1A-208ENST00000494728 FIGNL1Q6PIW4 674 aa10.48□□□□□ -0.73
VTI1A-208ENST00000494728 SZRD1Q7Z422 152 aa10.48□□□□□ -0.73
VTI1A-208ENST00000494728 KIF18BQ86Y91 864 aa10.48□□□□□ -0.73
VTI1A-208ENST00000494728 CNEP1R1Q8N9A8 125 aa10.48□□□□□ -0.73
VTI1A-208ENST00000494728 OR4C3Q8NH37 302 aa10.48□□□□□ -0.73
VTI1A-208ENST00000494728 GOT1L1Q8NHS2 421 aaPredicted RBP10.48□□□□□ -0.73
VTI1A-208ENST00000494728 GPR151Q8TDV0 419 aa10.48□□□□□ -0.73
VTI1A-208ENST00000494728 PPCDCQ96CD2 204 aa10.48□□□□□ -0.73
VTI1A-208ENST00000494728 METTL2AQ96IZ6 378 aaKnown RBP10.48□□□□□ -0.73
VTI1A-208ENST00000494728 C3orf30Q96M34 536 aa10.48□□□□□ -0.73
VTI1A-208ENST00000494728 ALPK1Q96QP1 1244 aa10.48□□□□□ -0.73
VTI1A-208ENST00000494728 PIGQQ9BRB3 760 aa10.48□□□□□ -0.73
VTI1A-208ENST00000494728 YIPF4Q9BSR8 244 aa10.48□□□□□ -0.73
VTI1A-208ENST00000494728 DLL4Q9NR61 685 aa10.48□□□□□ -0.73
VTI1A-208ENST00000494728 NTMQ9P121 344 aa10.48□□□□□ -0.73
VTI1A-208ENST00000494728 VDAC3Q9Y277 283 aa10.48□□□□□ -0.73
VTI1A-208ENST00000494728 CADP27708 2225 aa10.48□□□□□ -0.73
VTI1A-208ENST00000494728 USF3Q68DE3 2245 aa10.48□□□□□ -0.73
VTI1A-208ENST00000494728 CSPG4Q6UVK1 2322 aa10.47□□□□□ -0.73
VTI1A-208ENST00000494728 ANK3Q12955 4377 aaKnown RBP10.47□□□□□ -0.73
VTI1A-208ENST00000494728 TLDC2A0PJX2 215 aa10.47□□□□□ -0.73
VTI1A-208ENST00000494728 DEFB108AA8MXU0 73 aa10.47□□□□□ -0.73
VTI1A-208ENST00000494728 OIP5O43482 229 aa10.47□□□□□ -0.73
VTI1A-208ENST00000494728 SMNDC1O75940 238 aaKnown RBP eCLIP10.47□□□□□ -0.73
VTI1A-208ENST00000494728 AQP8O94778 261 aa10.47□□□□□ -0.73
VTI1A-208ENST00000494728 KCNK2O95069 426 aa10.47□□□□□ -0.73
VTI1A-208ENST00000494728 OXSR1O95747 527 aaPredicted RBP10.47□□□□□ -0.73
VTI1A-208ENST00000494728 CGAP01215 116 aa10.47□□□□□ -0.73
VTI1A-208ENST00000494728 PRPS2P11908 318 aa10.47□□□□□ -0.73
VTI1A-208ENST00000494728 NEFHP12036 1026 aa10.47□□□□□ -0.73
VTI1A-208ENST00000494728 PEPDP12955 493 aa10.47□□□□□ -0.73
VTI1A-208ENST00000494728 DNASE1P24855 282 aa10.47□□□□□ -0.73
VTI1A-208ENST00000494728 PSMA4P25789 261 aaKnown RBP10.47□□□□□ -0.73
VTI1A-208ENST00000494728 GPC1P35052 558 aa10.47□□□□□ -0.73
VTI1A-208ENST00000494728 SLC6A8P48029 635 aa10.47□□□□□ -0.73
VTI1A-208ENST00000494728 PRKAG1P54619 331 aa10.47□□□□□ -0.73
VTI1A-208ENST00000494728 ADAM8P78325 824 aa10.47□□□□□ -0.73
VTI1A-208ENST00000494728 PON3Q15166 354 aa10.47□□□□□ -0.73
VTI1A-208ENST00000494728 ZNHIT3Q15649 155 aaPredicted RBP10.47□□□□□ -0.73
VTI1A-208ENST00000494728 CTU2Q2VPK5 515 aaKnown RBP10.47□□□□□ -0.73
VTI1A-208ENST00000494728 ARL13AQ5H913 290 aaPredicted RBP10.47□□□□□ -0.73
VTI1A-208ENST00000494728 ZNF550Q7Z398 422 aa10.47□□□□□ -0.73
VTI1A-208ENST00000494728 P4HA3Q7Z4N8 544 aa10.47□□□□□ -0.73
VTI1A-208ENST00000494728 LSRQ86X29 649 aaPredicted RBP10.47□□□□□ -0.73
VTI1A-208ENST00000494728 DDIASQ8IXT1 998 aa10.47□□□□□ -0.73
VTI1A-208ENST00000494728 MEIOBQ8N635 442 aa10.47□□□□□ -0.73
VTI1A-208ENST00000494728 METTL25Q8N6Q8 603 aa10.47□□□□□ -0.73
VTI1A-208ENST00000494728 WFDC11Q8NEX6 87 aa10.47□□□□□ -0.73
VTI1A-208ENST00000494728 NUP43Q8NFH3 380 aa10.47□□□□□ -0.73
VTI1A-208ENST00000494728 OR7A2PQ8NGA2 310 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms