RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 RHOJQ9H4E5 214 aa3.79□□□□□ -1.8
GTF3A-208ENST00000493903 PLEKHA3Q9HB20 300 aa3.79□□□□□ -1.8
GTF3A-208ENST00000493903 ZNF71Q9NQZ8 489 aaPredicted RBP3.79□□□□□ -1.8
GTF3A-208ENST00000493903 ZFP57Q9NU63 452 aa3.79□□□□□ -1.8
GTF3A-208ENST00000493903 UTP6Q9NYH9 597 aaKnown RBP3.79□□□□□ -1.8
GTF3A-208ENST00000493903 ONECUT1Q9UBC0 465 aa3.79□□□□□ -1.8
GTF3A-208ENST00000493903 LCMT1Q9UIC8 334 aa3.79□□□□□ -1.8
GTF3A-208ENST00000493903 EXOSC1Q9Y3B2 195 aaKnown RBP3.79□□□□□ -1.8
GTF3A-208ENST00000493903 MRPS18CQ9Y3D5 142 aaKnown RBP3.79□□□□□ -1.8
GTF3A-208ENST00000493903 SLIT1O75093 1534 aa3.79□□□□□ -1.8
GTF3A-208ENST00000493903 SCAF11Q99590 1463 aaKnown RBP3.79□□□□□ -1.8
GTF3A-208ENST00000493903 ROBO1Q9Y6N7 1651 aa3.78□□□□□ -1.8
GTF3A-208ENST00000493903 STK36Q9NRP7 1315 aa3.78□□□□□ -1.8
GTF3A-208ENST00000493903 GOLGA6L7A0A1B0GV03 622 aa3.78□□□□□ -1.8
GTF3A-208ENST00000493903 SERTM2A0A1B0GWG4 89 aa3.78□□□□□ -1.8
GTF3A-208ENST00000493903 ZNF724A8MTY0 619 aa3.78□□□□□ -1.8
GTF3A-208ENST00000493903 LACTBL1A8MY62 500 aa3.78□□□□□ -1.8
GTF3A-208ENST00000493903 NPIPB9F8W1W9 429 aa3.78□□□□□ -1.8
GTF3A-208ENST00000493903 BOLA2-SMG1P6H3BVE0 249 aa3.78□□□□□ -1.8
GTF3A-208ENST00000493903 NBR2O15453 112 aa3.78□□□□□ -1.8
GTF3A-208ENST00000493903 SORBS2O94875 1100 aaKnown RBP3.78□□□□□ -1.8
GTF3A-208ENST00000493903 PGK1P00558 417 aa3.78□□□□□ -1.8
GTF3A-208ENST00000493903 CRYAAP02489 173 aa3.78□□□□□ -1.8
GTF3A-208ENST00000493903 KRT14P02533 472 aa3.78□□□□□ -1.8
GTF3A-208ENST00000493903 H2BFMP0C1H6 154 aa3.78□□□□□ -1.8
GTF3A-208ENST00000493903 HSMCR30P0CW71 290 aa3.78□□□□□ -1.8
GTF3A-208ENST00000493903 AOC1P19801 751 aa3.78□□□□□ -1.8
GTF3A-208ENST00000493903 ID1P41134 155 aa3.78□□□□□ -1.8
GTF3A-208ENST00000493903 EPS15P42566 896 aa3.78□□□□□ -1.8
GTF3A-208ENST00000493903 MAGEA8P43361 318 aa3.78□□□□□ -1.8
GTF3A-208ENST00000493903 AP3M2P53677 418 aa3.78□□□□□ -1.8
GTF3A-208ENST00000493903 SH3BGRP55822 239 aaPredicted RBP3.78□□□□□ -1.8
GTF3A-208ENST00000493903 SEC61GP60059 68 aa3.78□□□□□ -1.8
GTF3A-208ENST00000493903 NTHL1P78549 312 aa3.78□□□□□ -1.8
GTF3A-208ENST00000493903 EMC2Q15006 297 aa3.78□□□□□ -1.8
GTF3A-208ENST00000493903 TMEM44Q2T9K0 475 aa3.78□□□□□ -1.8
GTF3A-208ENST00000493903 GGTA1PQ4G0N0 100 aa3.78□□□□□ -1.8
GTF3A-208ENST00000493903 C1orf185Q5T7R7 199 aa3.78□□□□□ -1.8
GTF3A-208ENST00000493903 SPSB3Q6PJ21 355 aa3.78□□□□□ -1.8
GTF3A-208ENST00000493903 C19orf48Q6RUI8 117 aa3.78□□□□□ -1.8
GTF3A-208ENST00000493903 GDPD4Q6W3E5 623 aa3.78□□□□□ -1.8
GTF3A-208ENST00000493903 HACD2Q6Y1H2 254 aa3.78□□□□□ -1.8
GTF3A-208ENST00000493903 KIAA1328Q86T90 577 aa3.78□□□□□ -1.8
GTF3A-208ENST00000493903 ACOT1Q86TX2 421 aa3.78□□□□□ -1.8
GTF3A-208ENST00000493903 BIVMQ86UB2 503 aa3.78□□□□□ -1.8
GTF3A-208ENST00000493903 HOGA1Q86XE5 327 aa3.78□□□□□ -1.8
GTF3A-208ENST00000493903 TGIF2LXQ8IUE1 241 aa3.78□□□□□ -1.8
GTF3A-208ENST00000493903 OTUD6BQ8N6M0 293 aa3.78□□□□□ -1.8
GTF3A-208ENST00000493903 FAM184AQ8NB25 1140 aa3.78□□□□□ -1.8
GTF3A-208ENST00000493903 TMEM178AQ8NBL3 297 aa3.78□□□□□ -1.8
GTF3A-208ENST00000493903 STXBP6Q8NFX7 210 aa3.78□□□□□ -1.8
GTF3A-208ENST00000493903 OR4F17Q8NGA8 305 aa3.78□□□□□ -1.8
GTF3A-208ENST00000493903 OR52K1Q8NGK4 314 aa3.78□□□□□ -1.8
GTF3A-208ENST00000493903 OR10G7Q8NGN6 311 aa3.78□□□□□ -1.8
GTF3A-208ENST00000493903 M1APQ8TC57 530 aa3.78□□□□□ -1.8
GTF3A-208ENST00000493903 PELI1Q96FA3 418 aa3.78□□□□□ -1.8
GTF3A-208ENST00000493903 RBM14Q96PK6 669 aaKnown RBP3.78□□□□□ -1.8
GTF3A-208ENST00000493903 OR4F4Q96R69 305 aa3.78□□□□□ -1.8
GTF3A-208ENST00000493903 CCNL2Q96S94 520 aaPredicted RBP3.78□□□□□ -1.8
GTF3A-208ENST00000493903 MEIS3Q99687 375 aa3.78□□□□□ -1.8
GTF3A-208ENST00000493903 OVOL2Q9BRP0 275 aa3.78□□□□□ -1.8
GTF3A-208ENST00000493903 MCCC2Q9HCC0 563 aa3.78□□□□□ -1.8
GTF3A-208ENST00000493903 ZFP14Q9HCL3 533 aa3.78□□□□□ -1.8
GTF3A-208ENST00000493903 EIF3KQ9UBQ5 218 aaKnown RBP3.78□□□□□ -1.8
GTF3A-208ENST00000493903 ANAPC7Q9UJX3 599 aa3.78□□□□□ -1.8
GTF3A-208ENST00000493903 ADAM28Q9UKQ2 775 aa3.78□□□□□ -1.8
GTF3A-208ENST00000493903 CA5BQ9Y2D0 317 aa3.78□□□□□ -1.8
GTF3A-208ENST00000493903 IFT52Q9Y366 437 aa3.78□□□□□ -1.8
GTF3A-208ENST00000493903 CHTOPQ9Y3Y2 248 aaKnown RBP3.78□□□□□ -1.8
GTF3A-208ENST00000493903 MAD1L1Q9Y6D9 718 aa3.78□□□□□ -1.8
GTF3A-208ENST00000493903 CCDC141Q6ZP82 1450 aa3.78□□□□□ -1.8
GTF3A-208ENST00000493903 LRP6O75581 1613 aa3.77□□□□□ -1.81
GTF3A-208ENST00000493903 CCNB3Q8WWL7 1395 aa3.77□□□□□ -1.81
GTF3A-208ENST00000493903 NWD1Q149M9 1564 aa3.77□□□□□ -1.81
GTF3A-208ENST00000493903 EHBP1L1Q8N3D4 1523 aa3.77□□□□□ -1.81
GTF3A-208ENST00000493903 A0A087WW49 117 aa3.77□□□□□ -1.81
GTF3A-208ENST00000493903 HEATR9A2RTY3 570 aa3.77□□□□□ -1.81
GTF3A-208ENST00000493903 FAM172BPA6NC97 362 aa3.77□□□□□ -1.81
GTF3A-208ENST00000493903 NCF1BA6NI72 391 aaPredicted RBP3.77□□□□□ -1.81
GTF3A-208ENST00000493903 NCF1CA8MVU1 366 aaPredicted RBP3.77□□□□□ -1.81
GTF3A-208ENST00000493903 HHLA1C9JL84 531 aa3.77□□□□□ -1.81
GTF3A-208ENST00000493903 CASKO14936 926 aa3.77□□□□□ -1.81
GTF3A-208ENST00000493903 TIMM8AO60220 97 aaPredicted RBP3.77□□□□□ -1.81
GTF3A-208ENST00000493903 RANBP6O60518 1105 aaKnown RBP3.77□□□□□ -1.81
GTF3A-208ENST00000493903 RAMP1O60894 148 aa3.77□□□□□ -1.81
GTF3A-208ENST00000493903 N4BP1O75113 896 aaKnown RBP3.77□□□□□ -1.81
GTF3A-208ENST00000493903 PDE5AO76074 875 aa3.77□□□□□ -1.81
GTF3A-208ENST00000493903 OAS1P00973 400 aaKnown RBP3.77□□□□□ -1.81
GTF3A-208ENST00000493903 PRSS1P07477 247 aa3.77□□□□□ -1.81
GTF3A-208ENST00000493903 HOXB7P09629 217 aa3.77□□□□□ -1.81
GTF3A-208ENST00000493903 ALPIP09923 528 aa3.77□□□□□ -1.81
GTF3A-208ENST00000493903 ADORA3P0DMS8 318 aa3.77□□□□□ -1.81
GTF3A-208ENST00000493903 TROVE2P10155 538 aaKnown RBP eCLIP3.77□□□□□ -1.81
GTF3A-208ENST00000493903 POU2F1P14859 743 aa3.77□□□□□ -1.81
GTF3A-208ENST00000493903 PCMT1P22061 227 aa3.77□□□□□ -1.81
GTF3A-208ENST00000493903 SAA4P35542 130 aa3.77□□□□□ -1.81
GTF3A-208ENST00000493903 MAGEA5P43359 124 aa3.77□□□□□ -1.81
GTF3A-208ENST00000493903 CASP4P49662 377 aa3.77□□□□□ -1.81
GTF3A-208ENST00000493903 STK19P49842 368 aaPredicted RBP3.77□□□□□ -1.81
GTF3A-208ENST00000493903 EWSR1Q01844 656 aaKnown RBP eCLIP3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms