RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 TPST2O60704 377 aa8.47□□□□□ -1.05
SMARCC1-208ENST00000492896 FMO6PO60774 539 aa8.47□□□□□ -1.05
SMARCC1-208ENST00000492896 IGKV1D-16P01601 117 aa8.47□□□□□ -1.05
SMARCC1-208ENST00000492896 CT45A8P0DMV1 189 aa8.47□□□□□ -1.05
SMARCC1-208ENST00000492896 CT45A9P0DMV2 189 aa8.47□□□□□ -1.05
SMARCC1-208ENST00000492896 JUNBP17275 347 aaPredicted RBP8.47□□□□□ -1.05
SMARCC1-208ENST00000492896 GSTM3P21266 225 aa8.47□□□□□ -1.05
SMARCC1-208ENST00000492896 MMP11P24347 488 aa8.47□□□□□ -1.05
SMARCC1-208ENST00000492896 TTKP33981 857 aa8.47□□□□□ -1.05
SMARCC1-208ENST00000492896 RORAP35398 523 aa8.47□□□□□ -1.05
SMARCC1-208ENST00000492896 KRT20P35900 424 aa8.47□□□□□ -1.05
SMARCC1-208ENST00000492896 MPLP40238 635 aa8.47□□□□□ -1.05
SMARCC1-208ENST00000492896 ZNF136P52737 540 aa8.47□□□□□ -1.05
SMARCC1-208ENST00000492896 CSNK2BP67870 215 aa8.47□□□□□ -1.05
SMARCC1-208ENST00000492896 HOXC5Q00444 222 aa8.47□□□□□ -1.05
SMARCC1-208ENST00000492896 ALDH6A1Q02252 535 aaKnown RBP8.47□□□□□ -1.05
SMARCC1-208ENST00000492896 COX10Q12887 443 aa8.47□□□□□ -1.05
SMARCC1-208ENST00000492896 TARDBPQ13148 414 aaKnown RBP eCLIP8.47□□□□□ -1.05
SMARCC1-208ENST00000492896 PTGES3Q15185 160 aaKnown RBP8.47□□□□□ -1.05
SMARCC1-208ENST00000492896 ANGPT1Q15389 498 aa8.47□□□□□ -1.05
SMARCC1-208ENST00000492896 NEDD8Q15843 81 aa8.47□□□□□ -1.05
SMARCC1-208ENST00000492896 NNATQ16517 81 aa8.47□□□□□ -1.05
SMARCC1-208ENST00000492896 DECR1Q16698 335 aa8.47□□□□□ -1.05
SMARCC1-208ENST00000492896 ZSWIM7Q19AV6 140 aa8.47□□□□□ -1.05
SMARCC1-208ENST00000492896 CNPY1Q3B7I2 92 aa8.47□□□□□ -1.05
SMARCC1-208ENST00000492896 CT45A2Q5DJT8 189 aa8.47□□□□□ -1.05
SMARCC1-208ENST00000492896 PHF19Q5T6S3 580 aa8.47□□□□□ -1.05
SMARCC1-208ENST00000492896 AP1ARQ63HQ0 302 aa8.47□□□□□ -1.05
SMARCC1-208ENST00000492896 LAIR1Q6GTX8 287 aa8.47□□□□□ -1.05
SMARCC1-208ENST00000492896 C1orf94Q6P1W5 598 aa8.47□□□□□ -1.05
SMARCC1-208ENST00000492896 CD300LDQ6UXZ3 194 aa8.47□□□□□ -1.05
SMARCC1-208ENST00000492896 ZNF730Q6ZMV8 503 aa8.47□□□□□ -1.05
SMARCC1-208ENST00000492896 PRR23CQ6ZRP0 262 aa8.47□□□□□ -1.05
SMARCC1-208ENST00000492896 COX15Q7KZN9 410 aa8.47□□□□□ -1.05
SMARCC1-208ENST00000492896 GDF7Q7Z4P5 450 aa8.47□□□□□ -1.05
SMARCC1-208ENST00000492896 P3H2Q8IVL5 708 aa8.47□□□□□ -1.05
SMARCC1-208ENST00000492896 TMEM151BQ8IW70 566 aa8.47□□□□□ -1.05
SMARCC1-208ENST00000492896 ZNF614Q8N883 585 aa8.47□□□□□ -1.05
SMARCC1-208ENST00000492896 RCBTB1Q8NDN9 531 aa8.47□□□□□ -1.05
SMARCC1-208ENST00000492896 OR4N2Q8NGD1 307 aa8.47□□□□□ -1.05
SMARCC1-208ENST00000492896 OR14A16Q8NHC5 309 aa8.47□□□□□ -1.05
SMARCC1-208ENST00000492896 PIGXQ8TBF5 258 aa8.47□□□□□ -1.05
SMARCC1-208ENST00000492896 SLC2A12Q8TD20 617 aa8.47□□□□□ -1.05
SMARCC1-208ENST00000492896 GNPDA2Q8TDQ7 276 aa8.47□□□□□ -1.05
SMARCC1-208ENST00000492896 APH1BQ8WW43 257 aa8.47□□□□□ -1.05
SMARCC1-208ENST00000492896 IPCEF1Q8WWN9 437 aaPredicted RBP8.47□□□□□ -1.05
SMARCC1-208ENST00000492896 ACOT11Q8WXI4 607 aaPredicted RBP8.47□□□□□ -1.05
SMARCC1-208ENST00000492896 SLC46A1Q96NT5 459 aa8.47□□□□□ -1.05
SMARCC1-208ENST00000492896 GFM1Q96RP9 751 aaKnown RBP8.47□□□□□ -1.05
SMARCC1-208ENST00000492896 PRR14Q9BWN1 585 aa8.47□□□□□ -1.05
SMARCC1-208ENST00000492896 YIPF3Q9GZM5 350 aa8.47□□□□□ -1.05
SMARCC1-208ENST00000492896 CCNB1IP1Q9NPC3 277 aa8.47□□□□□ -1.05
SMARCC1-208ENST00000492896 KRCC1Q9NPI7 259 aaPredicted RBP8.47□□□□□ -1.05
SMARCC1-208ENST00000492896 C11orf16Q9NQ32 467 aa8.47□□□□□ -1.05
SMARCC1-208ENST00000492896 RASSF1Q9NS23 344 aa8.47□□□□□ -1.05
SMARCC1-208ENST00000492896 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.47□□□□□ -1.05
SMARCC1-208ENST00000492896 SIDT1Q9NXL6 827 aaKnown RBP8.47□□□□□ -1.05
SMARCC1-208ENST00000492896 REV1Q9UBZ9 1251 aa8.47□□□□□ -1.05
SMARCC1-208ENST00000492896 KCNE5Q9UJ90 142 aa8.47□□□□□ -1.05
SMARCC1-208ENST00000492896 CBLCQ9ULV8 474 aa8.47□□□□□ -1.05
SMARCC1-208ENST00000492896 NTNG1Q9Y2I2 539 aa8.47□□□□□ -1.05
SMARCC1-208ENST00000492896 CLCA3PQ9Y6N3 262 aa8.47□□□□□ -1.05
SMARCC1-208ENST00000492896 ASCC3Q8N3C0 2202 aaKnown RBP8.47□□□□□ -1.05
SMARCC1-208ENST00000492896 A0A087WUU8 490 aa8.46□□□□□ -1.06
SMARCC1-208ENST00000492896 TRAPPC13A5PLN9 417 aa8.46□□□□□ -1.06
SMARCC1-208ENST00000492896 D6RAR5 112 aa8.46□□□□□ -1.06
SMARCC1-208ENST00000492896 NPIPB9F8W1W9 429 aa8.46□□□□□ -1.06
SMARCC1-208ENST00000492896 H3BN98 237 aa8.46□□□□□ -1.06
SMARCC1-208ENST00000492896 POLR1CO15160 346 aaPredicted RBP8.46□□□□□ -1.06
SMARCC1-208ENST00000492896 XPNPEP2O43895 674 aa8.46□□□□□ -1.06
SMARCC1-208ENST00000492896 MRPS14O60783 128 aaKnown RBP8.46□□□□□ -1.06
SMARCC1-208ENST00000492896 WBP4O75554 376 aaKnown RBP8.46□□□□□ -1.06
SMARCC1-208ENST00000492896 SCRG1O75711 98 aa8.46□□□□□ -1.06
SMARCC1-208ENST00000492896 SOX14O95416 240 aa8.46□□□□□ -1.06
SMARCC1-208ENST00000492896 DDAH2O95865 285 aa8.46□□□□□ -1.06
SMARCC1-208ENST00000492896 HBQ1P09105 142 aa8.46□□□□□ -1.06
SMARCC1-208ENST00000492896 ZNF883P0CG24 379 aa8.46□□□□□ -1.06
SMARCC1-208ENST00000492896 POU1F1P28069 291 aa8.46□□□□□ -1.06
SMARCC1-208ENST00000492896 HTR2AP28223 471 aa8.46□□□□□ -1.06
SMARCC1-208ENST00000492896 GRK6P43250 576 aa8.46□□□□□ -1.06
SMARCC1-208ENST00000492896 ATP12AP54707 1039 aa8.46□□□□□ -1.06
SMARCC1-208ENST00000492896 SLC37A1P57057 533 aa8.46□□□□□ -1.06
SMARCC1-208ENST00000492896 SLC35A2P78381 396 aa8.46□□□□□ -1.06
SMARCC1-208ENST00000492896 ILKQ13418 452 aa8.46□□□□□ -1.06
SMARCC1-208ENST00000492896 TRA2AQ13595 282 aaKnown RBP eCLIP8.46□□□□□ -1.06
SMARCC1-208ENST00000492896 FGFBP1Q14512 234 aa8.46□□□□□ -1.06
SMARCC1-208ENST00000492896 ZNF141Q15928 474 aa8.46□□□□□ -1.06
SMARCC1-208ENST00000492896 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.46□□□□□ -1.06
SMARCC1-208ENST00000492896 ZBED5Q49AG3 693 aa8.46□□□□□ -1.06
SMARCC1-208ENST00000492896 VWA2Q5GFL6 755 aa8.46□□□□□ -1.06
SMARCC1-208ENST00000492896 PDZK1Q5T2W1 519 aa8.46□□□□□ -1.06
SMARCC1-208ENST00000492896 SLX4IPQ5VYV7 408 aa8.46□□□□□ -1.06
SMARCC1-208ENST00000492896 C12orf73Q69YU5 71 aa8.46□□□□□ -1.06
SMARCC1-208ENST00000492896 RRM2BQ7LG56 351 aa8.46□□□□□ -1.06
SMARCC1-208ENST00000492896 ZER1Q7Z7L7 766 aa8.46□□□□□ -1.06
SMARCC1-208ENST00000492896 GRAMD2AQ8IUY3 354 aa8.46□□□□□ -1.06
SMARCC1-208ENST00000492896 SLITRK4Q8IW52 837 aa8.46□□□□□ -1.06
SMARCC1-208ENST00000492896 PRSS58Q8IYP2 241 aa8.46□□□□□ -1.06
SMARCC1-208ENST00000492896 NLGN4XQ8N0W4 816 aa8.46□□□□□ -1.06
SMARCC1-208ENST00000492896 SPARTQ8N0X7 666 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms