RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 KITP10721 976 aa22.38■■□□□ 1.17
UPF3A-209ENST00000492270 LBPP18428 481 aa22.38■■□□□ 1.17
UPF3A-209ENST00000492270 GCKP35557 465 aa22.38■■□□□ 1.17
UPF3A-209ENST00000492270 SRYQ05066 204 aa22.38■■□□□ 1.17
UPF3A-209ENST00000492270 ACBD4Q8NC06 268 aa22.38■■□□□ 1.17
UPF3A-209ENST00000492270 OR56A1Q8NGH5 318 aa22.38■■□□□ 1.17
UPF3A-209ENST00000492270 OR4C3Q8NH37 302 aa22.38■■□□□ 1.17
UPF3A-209ENST00000492270 DUSP19Q8WTR2 217 aa22.38■■□□□ 1.17
UPF3A-209ENST00000492270 SFXN2Q96NB2 322 aa22.38■■□□□ 1.17
UPF3A-209ENST00000492270 TRIM8Q9BZR9 551 aa22.38■■□□□ 1.17
UPF3A-209ENST00000492270 DPY30Q9C005 99 aa22.38■■□□□ 1.17
UPF3A-209ENST00000492270 ENKD1Q9H0I2 346 aa22.38■■□□□ 1.17
UPF3A-209ENST00000492270 SDHAF3Q9NRP4 125 aa22.38■■□□□ 1.17
UPF3A-209ENST00000492270 GPATCH2Q9NW75 528 aa22.38■■□□□ 1.17
UPF3A-209ENST00000492270 ANKRD28O15084 1053 aa22.37■■□□□ 1.17
UPF3A-209ENST00000492270 GMFGO60234 142 aa22.37■■□□□ 1.17
UPF3A-209ENST00000492270 OXSR1O95747 527 aaPredicted RBP22.37■■□□□ 1.17
UPF3A-209ENST00000492270 SOAT1P35610 550 aa22.37■■□□□ 1.17
UPF3A-209ENST00000492270 CLK3P49761 638 aaKnown RBP22.37■■□□□ 1.17
UPF3A-209ENST00000492270 LHX2P50458 406 aa22.37■■□□□ 1.17
UPF3A-209ENST00000492270 DSCR4P56555 118 aaPredicted RBP22.37■■□□□ 1.17
UPF3A-209ENST00000492270 B3GALT5-AS1P59052 145 aa22.37■■□□□ 1.17
UPF3A-209ENST00000492270 POU6F2P78424 691 aaPredicted RBP22.37■■□□□ 1.17
UPF3A-209ENST00000492270 CPEB4Q17RY0 729 aaKnown RBP eCLIP22.37■■□□□ 1.17
UPF3A-209ENST00000492270 AGBL2Q5U5Z8 902 aa22.37■■□□□ 1.17
UPF3A-209ENST00000492270 NSUN5P2Q63ZY6 315 aa22.37■■□□□ 1.17
UPF3A-209ENST00000492270 CDC73Q6P1J9 531 aa22.37■■□□□ 1.17
UPF3A-209ENST00000492270 PLXDC2Q6UX71 529 aa22.37■■□□□ 1.17
UPF3A-209ENST00000492270 MEX3BQ6ZN04 569 aaKnown RBP22.37■■□□□ 1.17
UPF3A-209ENST00000492270 LACC1Q8IV20 430 aa22.37■■□□□ 1.17
UPF3A-209ENST00000492270 CLEC4FQ8N1N0 589 aa22.37■■□□□ 1.17
UPF3A-209ENST00000492270 SFXN5Q8TD22 340 aa22.37■■□□□ 1.17
UPF3A-209ENST00000492270 TUBA1CQ9BQE3 449 aa22.37■■□□□ 1.17
UPF3A-209ENST00000492270 NEUROD4Q9HD90 331 aa22.37■■□□□ 1.17
UPF3A-209ENST00000492270 MRPS18CQ9Y3D5 142 aaKnown RBP22.37■■□□□ 1.17
UPF3A-209ENST00000492270 KCNE3Q9Y6H6 103 aa22.37■■□□□ 1.17
UPF3A-209ENST00000492270 GOLGA8QA0A0J9YX86 632 aa22.36■■□□□ 1.17
UPF3A-209ENST00000492270 GOLGA8OA6NCC3 632 aa22.36■■□□□ 1.17
UPF3A-209ENST00000492270 GOLGA8NF8WBI6 632 aa22.36■■□□□ 1.17
UPF3A-209ENST00000492270 CPN1P15169 458 aa22.36■■□□□ 1.17
UPF3A-209ENST00000492270 HK1P19367 917 aa22.36■■□□□ 1.17
UPF3A-209ENST00000492270 MSX1P28360 303 aa22.36■■□□□ 1.17
UPF3A-209ENST00000492270 CEACAM8P31997 349 aaPredicted RBP22.36■■□□□ 1.17
UPF3A-209ENST00000492270 OCRLQ01968 901 aa22.36■■□□□ 1.17
UPF3A-209ENST00000492270 ATG16L1Q676U5 607 aa22.36■■□□□ 1.17
UPF3A-209ENST00000492270 ENPP6Q6UWR7 440 aa22.36■■□□□ 1.17
UPF3A-209ENST00000492270 ZNF295-AS1Q8N0V1 137 aa22.36■■□□□ 1.17
UPF3A-209ENST00000492270 GATSQ8NAP1 163 aa22.36■■□□□ 1.17
UPF3A-209ENST00000492270 RAB3IL1Q8TBN0 382 aa22.36■■□□□ 1.17
UPF3A-209ENST00000492270 STACQ99469 402 aa22.36■■□□□ 1.17
UPF3A-209ENST00000492270 G6PC3Q9BUM1 346 aa22.36■■□□□ 1.17
UPF3A-209ENST00000492270 BTBD2Q9BX70 525 aa22.36■■□□□ 1.17
UPF3A-209ENST00000492270 ACTRT3Q9BYD9 372 aa22.36■■□□□ 1.17
UPF3A-209ENST00000492270 PIGUQ9H490 435 aa22.36■■□□□ 1.17
UPF3A-209ENST00000492270 WDR55Q9H6Y2 383 aaPredicted RBP22.36■■□□□ 1.17
UPF3A-209ENST00000492270 MANSC1Q9H8J5 431 aa22.36■■□□□ 1.17
UPF3A-209ENST00000492270 DUSP22Q9NRW4 184 aa22.36■■□□□ 1.17
UPF3A-209ENST00000492270 FAM47E-STBD1D6RA91 191 aa22.35■■□□□ 1.17
UPF3A-209ENST00000492270 H0Y3Z8 333 aa22.35■■□□□ 1.17
UPF3A-209ENST00000492270 IGFBP2P18065 325 aa22.35■■□□□ 1.17
UPF3A-209ENST00000492270 EPHA3P29320 983 aa22.35■■□□□ 1.17
UPF3A-209ENST00000492270 NME5P56597 212 aa22.35■■□□□ 1.17
UPF3A-209ENST00000492270 CLDN18P56856 261 aa22.35■■□□□ 1.17
UPF3A-209ENST00000492270 PHC1P78364 1004 aa22.35■■□□□ 1.17
UPF3A-209ENST00000492270 OGFOD2Q6N063 350 aa22.35■■□□□ 1.17
UPF3A-209ENST00000492270 ANKRD46Q86W74 232 aa22.35■■□□□ 1.17
UPF3A-209ENST00000492270 WDR75Q8IWA0 830 aaKnown RBP22.35■■□□□ 1.17
UPF3A-209ENST00000492270 LRRC34Q8IZ02 419 aa22.35■■□□□ 1.17
UPF3A-209ENST00000492270 RELL2Q8NC24 303 aaPredicted RBP22.35■■□□□ 1.17
UPF3A-209ENST00000492270 OR8J2Q8NGG1 315 aa22.35■■□□□ 1.17
UPF3A-209ENST00000492270 OR5M1Q8NGP8 315 aa22.35■■□□□ 1.17
UPF3A-209ENST00000492270 DTNBP1Q96EV8 351 aa22.35■■□□□ 1.17
UPF3A-209ENST00000492270 SPOCK3Q9BQ16 436 aa22.35■■□□□ 1.17
UPF3A-209ENST00000492270 SERHL2Q9H4I8 314 aa22.35■■□□□ 1.17
UPF3A-209ENST00000492270 RUBCNLQ9H714 662 aa22.35■■□□□ 1.17
UPF3A-209ENST00000492270 CD8B2A6NJW9 211 aa22.34■■□□□ 1.17
UPF3A-209ENST00000492270 HSPB2A8KAH6 182 aa22.34■■□□□ 1.17
UPF3A-209ENST00000492270 ALG1L2C9J202 215 aa22.34■■□□□ 1.17
UPF3A-209ENST00000492270 HDAC3O15379 428 aa22.34■■□□□ 1.17
UPF3A-209ENST00000492270 SCN2BO60939 215 aa22.34■■□□□ 1.17
UPF3A-209ENST00000492270 ZNF708P17019 499 aa22.34■■□□□ 1.17
UPF3A-209ENST00000492270 TBXA2RP21731 343 aa22.34■■□□□ 1.17
UPF3A-209ENST00000492270 CHMP24386 653 aa22.34■■□□□ 1.17
UPF3A-209ENST00000492270 TIMP3P35625 211 aa22.34■■□□□ 1.17
UPF3A-209ENST00000492270 RPS26P62854 115 aaKnown RBP22.34■■□□□ 1.17
UPF3A-209ENST00000492270 C17orf67Q0P5P2 114 aa22.34■■□□□ 1.17
UPF3A-209ENST00000492270 HSPB2Q16082 182 aa22.34■■□□□ 1.17
UPF3A-209ENST00000492270 SPANXN4Q5MJ08 99 aa22.34■■□□□ 1.17
UPF3A-209ENST00000492270 RAET1LQ5VY80 246 aa22.34■■□□□ 1.17
UPF3A-209ENST00000492270 AAGABQ6PD74 315 aa22.34■■□□□ 1.17
UPF3A-209ENST00000492270 C9orf106Q8NAJ2 232 aa22.34■■□□□ 1.17
UPF3A-209ENST00000492270 OR5D16Q8NGK9 328 aa22.34■■□□□ 1.17
UPF3A-209ENST00000492270 ZPLD1Q8TCW7 415 aa22.34■■□□□ 1.17
UPF3A-209ENST00000492270 ADAMTS15Q8TE58 950 aa22.34■■□□□ 1.17
UPF3A-209ENST00000492270 TESCQ96BS2 214 aa22.34■■□□□ 1.17
UPF3A-209ENST00000492270 MOAP1Q96BY2 351 aa22.34■■□□□ 1.17
UPF3A-209ENST00000492270 C1GALT1C1Q96EU7 318 aa22.34■■□□□ 1.17
UPF3A-209ENST00000492270 TEX37Q96LM6 180 aa22.34■■□□□ 1.17
UPF3A-209ENST00000492270 TREX2Q9BQ50 279 aaPredicted RBP22.34■■□□□ 1.17
UPF3A-209ENST00000492270 AIG1Q9NVV5 245 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms