RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 UQCRHLA0A096LP55 91 aa13.68□□□□□ -0.22
USP39-217ENST00000491659 TMEM120BA0PK00 339 aa13.68□□□□□ -0.22
USP39-217ENST00000491659 KCNK2O95069 426 aa13.68□□□□□ -0.22
USP39-217ENST00000491659 HMGN2P05204 90 aaKnown RBP13.68□□□□□ -0.22
USP39-217ENST00000491659 HPGDP15428 266 aa13.68□□□□□ -0.22
USP39-217ENST00000491659 SOAT1P35610 550 aa13.68□□□□□ -0.22
USP39-217ENST00000491659 CCT3P49368 545 aaKnown RBP13.68□□□□□ -0.22
USP39-217ENST00000491659 LHX2P50458 406 aa13.68□□□□□ -0.22
USP39-217ENST00000491659 ASCL1P50553 236 aa13.68□□□□□ -0.22
USP39-217ENST00000491659 DIO3P55073 304 aa13.68□□□□□ -0.22
USP39-217ENST00000491659 CLDN8P56748 225 aa13.68□□□□□ -0.22
USP39-217ENST00000491659 POU6F2P78424 691 aaPredicted RBP13.68□□□□□ -0.22
USP39-217ENST00000491659 C17orf67Q0P5P2 114 aa13.68□□□□□ -0.22
USP39-217ENST00000491659 LASP1Q14847 261 aaKnown RBP13.68□□□□□ -0.22
USP39-217ENST00000491659 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.68□□□□□ -0.22
USP39-217ENST00000491659 PGS1Q32NB8 556 aa13.68□□□□□ -0.22
USP39-217ENST00000491659 FIGNL1Q6PIW4 674 aa13.68□□□□□ -0.22
USP39-217ENST00000491659 CAMKMTQ7Z624 323 aa13.68□□□□□ -0.22
USP39-217ENST00000491659 GALNT10Q86SR1 603 aa13.68□□□□□ -0.22
USP39-217ENST00000491659 RIMKLAQ8IXN7 391 aa13.68□□□□□ -0.22
USP39-217ENST00000491659 DMRTC2Q8IXT2 367 aaPredicted RBP13.68□□□□□ -0.22
USP39-217ENST00000491659 ZNF295-AS1Q8N0V1 137 aa13.68□□□□□ -0.22
USP39-217ENST00000491659 PSMA8Q8TAA3 256 aa13.68□□□□□ -0.22
USP39-217ENST00000491659 MGARPQ8TDB4 240 aa13.68□□□□□ -0.22
USP39-217ENST00000491659 DUSP19Q8WTR2 217 aa13.68□□□□□ -0.22
USP39-217ENST00000491659 OTUB1Q96FW1 271 aaPredicted RBP13.68□□□□□ -0.22
USP39-217ENST00000491659 TUBA1CQ9BQE3 449 aa13.68□□□□□ -0.22
USP39-217ENST00000491659 G6PC3Q9BUM1 346 aa13.68□□□□□ -0.22
USP39-217ENST00000491659 BTBD2Q9BX70 525 aa13.68□□□□□ -0.22
USP39-217ENST00000491659 NUF2Q9BZD4 464 aa13.68□□□□□ -0.22
USP39-217ENST00000491659 CXorf36Q9H7Y0 433 aa13.68□□□□□ -0.22
USP39-217ENST00000491659 DUSP22Q9NRW4 184 aa13.68□□□□□ -0.22
USP39-217ENST00000491659 ZNF629Q9UEG4 869 aaPredicted RBP13.68□□□□□ -0.22
USP39-217ENST00000491659 FAF1Q9UNN5 650 aaPredicted RBP13.68□□□□□ -0.22
USP39-217ENST00000491659 MED12Q93074 2177 aa13.67□□□□□ -0.22
USP39-217ENST00000491659 CLCA1A8K7I4 914 aa13.67□□□□□ -0.22
USP39-217ENST00000491659 B4DXG7 233 aa13.67□□□□□ -0.22
USP39-217ENST00000491659 ZIC3O60481 467 aa13.67□□□□□ -0.22
USP39-217ENST00000491659 OXSR1O95747 527 aaPredicted RBP13.67□□□□□ -0.22
USP39-217ENST00000491659 NGFRP08138 427 aa13.67□□□□□ -0.22
USP39-217ENST00000491659 PEPDP12955 493 aa13.67□□□□□ -0.22
USP39-217ENST00000491659 ZNF708P17019 499 aa13.67□□□□□ -0.22
USP39-217ENST00000491659 POU3F2P20265 443 aaPredicted RBP13.67□□□□□ -0.22
USP39-217ENST00000491659 LCN1P31025 176 aa13.67□□□□□ -0.22
USP39-217ENST00000491659 STARP49675 285 aa13.67□□□□□ -0.22
USP39-217ENST00000491659 ZNF136P52737 540 aa13.67□□□□□ -0.22
USP39-217ENST00000491659 DGKQP52824 942 aa13.67□□□□□ -0.22
USP39-217ENST00000491659 CLDN18P56856 261 aa13.67□□□□□ -0.22
USP39-217ENST00000491659 MAGOHP61326 146 aaKnown RBP13.67□□□□□ -0.22
USP39-217ENST00000491659 TLE4Q04727 773 aa13.67□□□□□ -0.22
USP39-217ENST00000491659 EXOSC6Q5RKV6 272 aaKnown RBP13.67□□□□□ -0.22
USP39-217ENST00000491659 BEND6Q5SZJ8 279 aaPredicted RBP13.67□□□□□ -0.22
USP39-217ENST00000491659 CDC73Q6P1J9 531 aa13.67□□□□□ -0.22
USP39-217ENST00000491659 BHLHB9Q6PI77 547 aa13.67□□□□□ -0.22
USP39-217ENST00000491659 LRRC34Q8IZ02 419 aa13.67□□□□□ -0.22
USP39-217ENST00000491659 RELL2Q8NC24 303 aaPredicted RBP13.67□□□□□ -0.22
USP39-217ENST00000491659 CDS1Q92903 461 aa13.67□□□□□ -0.22
USP39-217ENST00000491659 C1GALT1C1Q96EU7 318 aa13.67□□□□□ -0.22
USP39-217ENST00000491659 LURAP1Q96LR2 239 aa13.67□□□□□ -0.22
USP39-217ENST00000491659 ZFP3Q96NJ6 502 aa13.67□□□□□ -0.22
USP39-217ENST00000491659 TM9SF2Q99805 663 aa13.67□□□□□ -0.22
USP39-217ENST00000491659 ACTRT3Q9BYD9 372 aa13.67□□□□□ -0.22
USP39-217ENST00000491659 RTN4RQ9BZR6 473 aa13.67□□□□□ -0.22
USP39-217ENST00000491659 DPY30Q9C005 99 aa13.67□□□□□ -0.22
USP39-217ENST00000491659 GIN1Q9NXP7 522 aa13.67□□□□□ -0.22
USP39-217ENST00000491659 NKIRAS1Q9NYS0 192 aa13.67□□□□□ -0.22
USP39-217ENST00000491659 ABCA12Q86UK0 2595 aa13.67□□□□□ -0.22
USP39-217ENST00000491659 APCP25054 2843 aa13.66□□□□□ -0.22
USP39-217ENST00000491659 IGLV3-32A0A0A0MS00 114 aa13.66□□□□□ -0.22
USP39-217ENST00000491659 ALG1L2C9J202 215 aa13.66□□□□□ -0.22
USP39-217ENST00000491659 LINC01387J3KSC0 135 aa13.66□□□□□ -0.22
USP39-217ENST00000491659 SCDO00767 359 aa13.66□□□□□ -0.22
USP39-217ENST00000491659 DYNC1I1O14576 645 aa13.66□□□□□ -0.22
USP39-217ENST00000491659 NDUFB5O43674 189 aa13.66□□□□□ -0.22
USP39-217ENST00000491659 SOX30O94993 753 aa13.66□□□□□ -0.22
USP39-217ENST00000491659 LBPP18428 481 aa13.66□□□□□ -0.22
USP39-217ENST00000491659 ATP6V1C1P21283 382 aa13.66□□□□□ -0.22
USP39-217ENST00000491659 TBXA2RP21731 343 aa13.66□□□□□ -0.22
USP39-217ENST00000491659 CTSSP25774 331 aa13.66□□□□□ -0.22
USP39-217ENST00000491659 UQCRC1P31930 480 aa13.66□□□□□ -0.22
USP39-217ENST00000491659 OPRM1P35372 400 aa13.66□□□□□ -0.22
USP39-217ENST00000491659 PEX19P40855 299 aa13.66□□□□□ -0.22
USP39-217ENST00000491659 SLC18A1P54219 525 aa13.66□□□□□ -0.22
USP39-217ENST00000491659 WDR4P57081 412 aaKnown RBP13.66□□□□□ -0.22
USP39-217ENST00000491659 B3GALT5-AS1P59052 145 aa13.66□□□□□ -0.22
USP39-217ENST00000491659 MYBPHQ13203 477 aa13.66□□□□□ -0.22
USP39-217ENST00000491659 BCL2A1Q16548 175 aa13.66□□□□□ -0.22
USP39-217ENST00000491659 CCNJQ5T5M9 372 aa13.66□□□□□ -0.22
USP39-217ENST00000491659 CHMP1BQ7LBR1 199 aa13.66□□□□□ -0.22
USP39-217ENST00000491659 GRAMD2AQ8IUY3 354 aa13.66□□□□□ -0.22
USP39-217ENST00000491659 MISPQ8IVT2 679 aa13.66□□□□□ -0.22
USP39-217ENST00000491659 MEIOBQ8N635 442 aa13.66□□□□□ -0.22
USP39-217ENST00000491659 C9orf106Q8NAJ2 232 aa13.66□□□□□ -0.22
USP39-217ENST00000491659 OR5AK3PQ8NH89 298 aa13.66□□□□□ -0.22
USP39-217ENST00000491659 GOT1L1Q8NHS2 421 aaPredicted RBP13.66□□□□□ -0.22
USP39-217ENST00000491659 FAM110BQ8TC76 370 aa13.66□□□□□ -0.22
USP39-217ENST00000491659 ADAMTS15Q8TE58 950 aa13.66□□□□□ -0.22
USP39-217ENST00000491659 NUDT8Q8WV74 236 aa13.66□□□□□ -0.22
USP39-217ENST00000491659 ZNF559Q9BR84 538 aa13.66□□□□□ -0.22
USP39-217ENST00000491659 PIGQQ9BRB3 760 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms