RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 ZNF708P17019 499 aa15.01□□□□□ -0.01
PDLIM2-217ENST00000491330 PRPS1L1P21108 318 aa15.01□□□□□ -0.01
PDLIM2-217ENST00000491330 TCEA1P23193 301 aaKnown RBP15.01□□□□□ -0.01
PDLIM2-217ENST00000491330 ME2P23368 584 aa15.01□□□□□ -0.01
PDLIM2-217ENST00000491330 DNASE1P24855 282 aa15.01□□□□□ -0.01
PDLIM2-217ENST00000491330 LHX2P50458 406 aa15.01□□□□□ -0.01
PDLIM2-217ENST00000491330 ZNF41P51814 821 aaPredicted RBP15.01□□□□□ -0.01
PDLIM2-217ENST00000491330 MLC1Q15049 377 aa15.01□□□□□ -0.01
PDLIM2-217ENST00000491330 BEND6Q5SZJ8 279 aaPredicted RBP15.01□□□□□ -0.01
PDLIM2-217ENST00000491330 ANKRD26P1Q6NSI1 321 aa15.01□□□□□ -0.01
PDLIM2-217ENST00000491330 MARCH3Q86UD3 253 aa15.01□□□□□ -0.01
PDLIM2-217ENST00000491330 RELL2Q8NC24 303 aaPredicted RBP15.01□□□□□ -0.01
PDLIM2-217ENST00000491330 NAXEQ8NCW5 288 aa15.01□□□□□ -0.01
PDLIM2-217ENST00000491330 CHDHQ8NE62 594 aaPredicted RBP15.01□□□□□ -0.01
PDLIM2-217ENST00000491330 VPS37AQ8NEZ2 397 aa15.01□□□□□ -0.01
PDLIM2-217ENST00000491330 CLHC1Q8NHS4 586 aa15.01□□□□□ -0.01
PDLIM2-217ENST00000491330 RAB3IL1Q8TBN0 382 aa15.01□□□□□ -0.01
PDLIM2-217ENST00000491330 NINJ1Q92982 152 aa15.01□□□□□ -0.01
PDLIM2-217ENST00000491330 SLC39A3Q9BRY0 314 aa15.01□□□□□ -0.01
PDLIM2-217ENST00000491330 HOXD1Q9GZZ0 328 aa15.01□□□□□ -0.01
PDLIM2-217ENST00000491330 CENPHQ9H3R5 247 aa15.01□□□□□ -0.01
PDLIM2-217ENST00000491330 TUBB1Q9H4B7 451 aa15.01□□□□□ -0.01
PDLIM2-217ENST00000491330 CRIM1Q9NZV1 1036 aa15.01□□□□□ -0.01
PDLIM2-217ENST00000491330 HAO1Q9UJM8 370 aa15.01□□□□□ -0.01
PDLIM2-217ENST00000491330 AP4B1Q9Y6B7 739 aa15.01□□□□□ -0.01
PDLIM2-217ENST00000491330 ZIC3O60481 467 aa15□□□□□ -0.01
PDLIM2-217ENST00000491330 NME6O75414 186 aaPredicted RBP15□□□□□ -0.01
PDLIM2-217ENST00000491330 TNFRSF21O75509 655 aa15□□□□□ -0.01
PDLIM2-217ENST00000491330 CTAG2O75638 210 aa15□□□□□ -0.01
PDLIM2-217ENST00000491330 NKX2-2O95096 273 aa15□□□□□ -0.01
PDLIM2-217ENST00000491330 CREB1P16220 341 aa15□□□□□ -0.01
PDLIM2-217ENST00000491330 AGFG1P52594 562 aaKnown RBP15□□□□□ -0.01
PDLIM2-217ENST00000491330 DLX5P56178 289 aa15□□□□□ -0.01
PDLIM2-217ENST00000491330 WNT3P56703 355 aa15□□□□□ -0.01
PDLIM2-217ENST00000491330 OCRLQ01968 901 aa15□□□□□ -0.01
PDLIM2-217ENST00000491330 PDE7AQ13946 482 aa15□□□□□ -0.01
PDLIM2-217ENST00000491330 DCST1Q5T197 706 aa15□□□□□ -0.01
PDLIM2-217ENST00000491330 FAM219BQ5XKK7 198 aa15□□□□□ -0.01
PDLIM2-217ENST00000491330 FADS6Q8N9I5 356 aa15□□□□□ -0.01
PDLIM2-217ENST00000491330 C9orf106Q8NAJ2 232 aa15□□□□□ -0.01
PDLIM2-217ENST00000491330 OR2M3Q8NG83 312 aa15□□□□□ -0.01
PDLIM2-217ENST00000491330 OR56A1Q8NGH5 318 aa15□□□□□ -0.01
PDLIM2-217ENST00000491330 ADAMTS15Q8TE58 950 aa15□□□□□ -0.01
PDLIM2-217ENST00000491330 OR5P2Q8WZ92 322 aa15□□□□□ -0.01
PDLIM2-217ENST00000491330 CIDECQ96AQ7 238 aaPredicted RBP15□□□□□ -0.01
PDLIM2-217ENST00000491330 ARL8AQ96BM9 186 aa15□□□□□ -0.01
PDLIM2-217ENST00000491330 C1GALT1C1Q96EU7 318 aa15□□□□□ -0.01
PDLIM2-217ENST00000491330 SH3GL2Q99962 352 aa15□□□□□ -0.01
PDLIM2-217ENST00000491330 NEUROD4Q9HD90 331 aa15□□□□□ -0.01
PDLIM2-217ENST00000491330 UBQLN4Q9NRR5 601 aa15□□□□□ -0.01
PDLIM2-217ENST00000491330 RASSF1Q9NS23 344 aa15□□□□□ -0.01
PDLIM2-217ENST00000491330 ATP6V1HQ9UI12 483 aa15□□□□□ -0.01
PDLIM2-217ENST00000491330 RAP2CQ9Y3L5 183 aa15□□□□□ -0.01
PDLIM2-217ENST00000491330 PTGDR2Q9Y5Y4 395 aa15□□□□□ -0.01
PDLIM2-217ENST00000491330 CELSR2Q9HCU4 2923 aa14.99□□□□□ -0.01
PDLIM2-217ENST00000491330 PHF3Q92576 2039 aaKnown RBP14.99□□□□□ -0.01
PDLIM2-217ENST00000491330 A6NNC1 897 aa14.99□□□□□ -0.01
PDLIM2-217ENST00000491330 H3BML4 177 aa14.99□□□□□ -0.01
PDLIM2-217ENST00000491330 SCAMP2O15127 329 aaKnown RBP14.99□□□□□ -0.01
PDLIM2-217ENST00000491330 PLGP00747 810 aaPredicted RBP14.99□□□□□ -0.01
PDLIM2-217ENST00000491330 NGFRP08138 427 aa14.99□□□□□ -0.01
PDLIM2-217ENST00000491330 FRKP42685 505 aaPredicted RBP14.99□□□□□ -0.01
PDLIM2-217ENST00000491330 GAS1P54826 345 aa14.99□□□□□ -0.01
PDLIM2-217ENST00000491330 KRTAP10-9P60411 292 aa14.99□□□□□ -0.01
PDLIM2-217ENST00000491330 ABCE1P61221 599 aaKnown RBP14.99□□□□□ -0.01
PDLIM2-217ENST00000491330 POU6F2P78424 691 aaPredicted RBP14.99□□□□□ -0.01
PDLIM2-217ENST00000491330 DAZAP2Q15038 168 aaPredicted RBP14.99□□□□□ -0.01
PDLIM2-217ENST00000491330 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.99□□□□□ -0.01
PDLIM2-217ENST00000491330 IL23RQ5VWK5 629 aa14.99□□□□□ -0.01
PDLIM2-217ENST00000491330 GTF2IRD2BQ6EKJ0 949 aa14.99□□□□□ -0.01
PDLIM2-217ENST00000491330 ZCCHC23Q6ZST2 131 aa14.99□□□□□ -0.01
PDLIM2-217ENST00000491330 LUZP2Q86TE4 346 aa14.99□□□□□ -0.01
PDLIM2-217ENST00000491330 GTF2IRD2Q86UP8 949 aa14.99□□□□□ -0.01
PDLIM2-217ENST00000491330 WDR75Q8IWA0 830 aaKnown RBP14.99□□□□□ -0.01
PDLIM2-217ENST00000491330 CNEP1R1Q8N9A8 125 aa14.99□□□□□ -0.01
PDLIM2-217ENST00000491330 OR2T11Q8NH01 316 aa14.99□□□□□ -0.01
PDLIM2-217ENST00000491330 RNF138Q8WVD3 245 aa14.99□□□□□ -0.01
PDLIM2-217ENST00000491330 KCNK9Q9NPC2 374 aa14.99□□□□□ -0.01
PDLIM2-217ENST00000491330 DUSP22Q9NRW4 184 aa14.99□□□□□ -0.01
PDLIM2-217ENST00000491330 GIN1Q9NXP7 522 aa14.99□□□□□ -0.01
PDLIM2-217ENST00000491330 ASIC5Q9NY37 505 aa14.99□□□□□ -0.01
PDLIM2-217ENST00000491330 NTMQ9P121 344 aa14.99□□□□□ -0.01
PDLIM2-217ENST00000491330 ZNF175Q9Y473 711 aa14.99□□□□□ -0.01
PDLIM2-217ENST00000491330 CACNA1CQ13936 2221 aa14.98□□□□□ -0.01
PDLIM2-217ENST00000491330 DUXAA6NLW8 204 aa14.98□□□□□ -0.01
PDLIM2-217ENST00000491330 ALG1L2C9J202 215 aa14.98□□□□□ -0.01
PDLIM2-217ENST00000491330 MSTNO14793 375 aa14.98□□□□□ -0.01
PDLIM2-217ENST00000491330 SEC14L5O43304 696 aa14.98□□□□□ -0.01
PDLIM2-217ENST00000491330 SKAP2O75563 359 aaPredicted RBP14.98□□□□□ -0.01
PDLIM2-217ENST00000491330 SMNDC1O75940 238 aaKnown RBP eCLIP14.98□□□□□ -0.01
PDLIM2-217ENST00000491330 SYNGR4O95473 234 aa14.98□□□□□ -0.01
PDLIM2-217ENST00000491330 TBXA2RP21731 343 aa14.98□□□□□ -0.01
PDLIM2-217ENST00000491330 KCNJ5P48544 419 aa14.98□□□□□ -0.01
PDLIM2-217ENST00000491330 CCT3P49368 545 aaKnown RBP14.98□□□□□ -0.01
PDLIM2-217ENST00000491330 ART1P52961 327 aa14.98□□□□□ -0.01
PDLIM2-217ENST00000491330 CLDN18P56856 261 aa14.98□□□□□ -0.01
PDLIM2-217ENST00000491330 C21orf58P58505 322 aa14.98□□□□□ -0.01
PDLIM2-217ENST00000491330 CHI3L2Q15782 390 aa14.98□□□□□ -0.01
PDLIM2-217ENST00000491330 C6orf136Q5SQH8 315 aa14.98□□□□□ -0.01
PDLIM2-217ENST00000491330 PPP4R4Q6NUP7 873 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms