RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 FDCSPQ8NFU4 85 aa10.08□□□□□ -0.8
VARS2-210ENST00000490699 FAM110BQ8TC76 370 aa10.08□□□□□ -0.8
VARS2-210ENST00000490699 SNRNP27Q8WVK2 155 aaKnown RBP10.08□□□□□ -0.8
VARS2-210ENST00000490699 WDR60Q8WVS4 1066 aa10.08□□□□□ -0.8
VARS2-210ENST00000490699 PROX1Q92786 737 aa10.08□□□□□ -0.8
VARS2-210ENST00000490699 EVA1AQ9H8M9 152 aa10.08□□□□□ -0.8
VARS2-210ENST00000490699 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.08□□□□□ -0.8
VARS2-210ENST00000490699 SACM1LQ9NTJ5 587 aa10.08□□□□□ -0.8
VARS2-210ENST00000490699 ACTR3BQ9P1U1 418 aa10.08□□□□□ -0.8
VARS2-210ENST00000490699 LRFN1Q9P244 771 aa10.08□□□□□ -0.8
VARS2-210ENST00000490699 EGFL7Q9UHF1 273 aa10.08□□□□□ -0.8
VARS2-210ENST00000490699 BAG5Q9UL15 447 aa10.08□□□□□ -0.8
VARS2-210ENST00000490699 MKLN1Q9UL63 735 aa10.08□□□□□ -0.8
VARS2-210ENST00000490699 KCNE3Q9Y6H6 103 aa10.08□□□□□ -0.8
VARS2-210ENST00000490699 ACACAQ13085 2346 aa10.08□□□□□ -0.8
VARS2-210ENST00000490699 PRAMEF25A6NGN4 478 aa10.07□□□□□ -0.8
VARS2-210ENST00000490699 TMEM200CA6NKL6 621 aa10.07□□□□□ -0.8
VARS2-210ENST00000490699 FAM47E-STBD1D6RA91 191 aa10.07□□□□□ -0.8
VARS2-210ENST00000490699 GTPBP1O00178 669 aaKnown RBP10.07□□□□□ -0.8
VARS2-210ENST00000490699 ARPC2O15144 300 aa10.07□□□□□ -0.8
VARS2-210ENST00000490699 SUV39H1O43463 412 aa10.07□□□□□ -0.8
VARS2-210ENST00000490699 NDUFB5O43674 189 aa10.07□□□□□ -0.8
VARS2-210ENST00000490699 TSPAN2O60636 221 aa10.07□□□□□ -0.8
VARS2-210ENST00000490699 ICOSLGO75144 302 aa10.07□□□□□ -0.8
VARS2-210ENST00000490699 CEACAM4O75871 244 aa10.07□□□□□ -0.8
VARS2-210ENST00000490699 DNAJB5O75953 348 aa10.07□□□□□ -0.8
VARS2-210ENST00000490699 OR6B1O95007 311 aa10.07□□□□□ -0.8
VARS2-210ENST00000490699 NADKO95544 446 aaPredicted RBP10.07□□□□□ -0.8
VARS2-210ENST00000490699 ZNF682O95780 498 aa10.07□□□□□ -0.8
VARS2-210ENST00000490699 THBS1P07996 1170 aa10.07□□□□□ -0.8
VARS2-210ENST00000490699 NGFRP08138 427 aa10.07□□□□□ -0.8
VARS2-210ENST00000490699 CHRM4P08173 479 aa10.07□□□□□ -0.8
VARS2-210ENST00000490699 CYP4B1P13584 511 aa10.07□□□□□ -0.8
VARS2-210ENST00000490699 HOXB6P17509 224 aaKnown RBP10.07□□□□□ -0.8
VARS2-210ENST00000490699 TBXA2RP21731 343 aa10.07□□□□□ -0.8
VARS2-210ENST00000490699 EVI2BP34910 448 aa10.07□□□□□ -0.8
VARS2-210ENST00000490699 MASP1P48740 699 aa10.07□□□□□ -0.8
VARS2-210ENST00000490699 FBXW4P57775 412 aa10.07□□□□□ -0.8
VARS2-210ENST00000490699 RHDQ02161 417 aa10.07□□□□□ -0.8
VARS2-210ENST00000490699 CHRNEQ04844 493 aa10.07□□□□□ -0.8
VARS2-210ENST00000490699 SNTA1Q13424 505 aa10.07□□□□□ -0.8
VARS2-210ENST00000490699 OR1C1Q15619 314 aa10.07□□□□□ -0.8
VARS2-210ENST00000490699 ADRM1Q16186 407 aa10.07□□□□□ -0.8
VARS2-210ENST00000490699 TBR1Q16650 682 aa10.07□□□□□ -0.8
VARS2-210ENST00000490699 ZNF311Q5JNZ3 666 aa10.07□□□□□ -0.8
VARS2-210ENST00000490699 RPS26P11Q5JNZ5 115 aaPredicted RBP10.07□□□□□ -0.8
VARS2-210ENST00000490699 TYW3Q6IPR3 259 aaKnown RBP10.07□□□□□ -0.8
VARS2-210ENST00000490699 THSD4Q6ZMP0 1018 aa10.07□□□□□ -0.8
VARS2-210ENST00000490699 FRRS1Q6ZNA5 592 aa10.07□□□□□ -0.8
VARS2-210ENST00000490699 CCDC80Q76M96 950 aa10.07□□□□□ -0.8
VARS2-210ENST00000490699 EIF3MQ7L2H7 374 aaKnown RBP10.07□□□□□ -0.8
VARS2-210ENST00000490699 PTRH1Q86Y79 214 aaKnown RBP10.07□□□□□ -0.8
VARS2-210ENST00000490699 CMIPQ8IY22 773 aa10.07□□□□□ -0.8
VARS2-210ENST00000490699 TMEM178AQ8NBL3 297 aa10.07□□□□□ -0.8
VARS2-210ENST00000490699 FAM156AQ8NDB6 213 aa10.07□□□□□ -0.8
VARS2-210ENST00000490699 OR52P1PQ8NH57 321 aa10.07□□□□□ -0.8
VARS2-210ENST00000490699 PSMF1Q92530 271 aa10.07□□□□□ -0.8
VARS2-210ENST00000490699 RSRC1Q96IZ7 334 aaKnown RBP10.07□□□□□ -0.8
VARS2-210ENST00000490699 CLPTM1LQ96KA5 538 aa10.07□□□□□ -0.8
VARS2-210ENST00000490699 OSBPL11Q9BXB4 747 aa10.07□□□□□ -0.8
VARS2-210ENST00000490699 SAP130Q9H0E3 1048 aa10.07□□□□□ -0.8
VARS2-210ENST00000490699 SLC38A1Q9H2H9 487 aa10.07□□□□□ -0.8
VARS2-210ENST00000490699 CD300AQ9UGN4 299 aa10.07□□□□□ -0.8
VARS2-210ENST00000490699 PACSIN3Q9UKS6 424 aa10.07□□□□□ -0.8
VARS2-210ENST00000490699 ZMIZ1Q9ULJ6 1067 aa10.07□□□□□ -0.8
VARS2-210ENST00000490699 SLC35A3Q9Y2D2 325 aa10.07□□□□□ -0.8
VARS2-210ENST00000490699 SLC9A8Q9Y2E8 581 aa10.07□□□□□ -0.8
VARS2-210ENST00000490699 KLF13Q9Y2Y9 288 aaPredicted RBP10.07□□□□□ -0.8
VARS2-210ENST00000490699 DTNAQ9Y4J8 743 aa10.07□□□□□ -0.8
VARS2-210ENST00000490699 AKAP13Q12802 2813 aa10.07□□□□□ -0.8
VARS2-210ENST00000490699 URB1O60287 2271 aaKnown RBP10.07□□□□□ -0.8
VARS2-210ENST00000490699 CEP295Q9C0D2 2601 aa10.06□□□□□ -0.8
VARS2-210ENST00000490699 APC2O95996 2303 aa10.06□□□□□ -0.8
VARS2-210ENST00000490699 A0A1W2PQD3 144 aa10.06□□□□□ -0.8
VARS2-210ENST00000490699 AGAP5A6NIR3 686 aa10.06□□□□□ -0.8
VARS2-210ENST00000490699 H0YHG0 523 aa10.06□□□□□ -0.8
VARS2-210ENST00000490699 M0QX08 132 aa10.06□□□□□ -0.8
VARS2-210ENST00000490699 TAF4O00268 1085 aa10.06□□□□□ -0.8
VARS2-210ENST00000490699 SCO2O43819 266 aa10.06□□□□□ -0.8
VARS2-210ENST00000490699 FCMRO60667 390 aa10.06□□□□□ -0.8
VARS2-210ENST00000490699 DPM1O60762 260 aa10.06□□□□□ -0.8
VARS2-210ENST00000490699 UGT2B11O75310 529 aa10.06□□□□□ -0.8
VARS2-210ENST00000490699 SLC25A12O75746 678 aa10.06□□□□□ -0.8
VARS2-210ENST00000490699 SNX4O95219 450 aa10.06□□□□□ -0.8
VARS2-210ENST00000490699 WDPCPO95876 746 aa10.06□□□□□ -0.8
VARS2-210ENST00000490699 CSTAP01040 98 aa10.06□□□□□ -0.8
VARS2-210ENST00000490699 C1QCP02747 245 aa10.06□□□□□ -0.8
VARS2-210ENST00000490699 PABPC4LP0CB38 370 aaKnown RBP10.06□□□□□ -0.8
VARS2-210ENST00000490699 UBL4AP11441 157 aa10.06□□□□□ -0.8
VARS2-210ENST00000490699 SFTPCP11686 197 aa10.06□□□□□ -0.8
VARS2-210ENST00000490699 NQO1P15559 274 aaKnown RBP10.06□□□□□ -0.8
VARS2-210ENST00000490699 PRKAR1BP31321 381 aa10.06□□□□□ -0.8
VARS2-210ENST00000490699 IFNA8P32881 189 aa10.06□□□□□ -0.8
VARS2-210ENST00000490699 KDELR2P33947 212 aa10.06□□□□□ -0.8
VARS2-210ENST00000490699 GZMMP51124 257 aa10.06□□□□□ -0.8
VARS2-210ENST00000490699 KCNJ2P63252 427 aa10.06□□□□□ -0.8
VARS2-210ENST00000490699 FUT5Q11128 374 aa10.06□□□□□ -0.8
VARS2-210ENST00000490699 TUBA3CQ13748 450 aa10.06□□□□□ -0.8
VARS2-210ENST00000490699 ZNF141Q15928 474 aa10.06□□□□□ -0.8
VARS2-210ENST00000490699 ZNF791Q3KP31 576 aaPredicted RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms