RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 GSX1Q9H4S2 264 aaPredicted RBP6.63□□□□□ -1.35
PRPF4B-208ENST00000490653 LRTM1Q9HBL6 345 aa6.63□□□□□ -1.35
PRPF4B-208ENST00000490653 MYNNQ9NPC7 610 aa6.63□□□□□ -1.35
PRPF4B-208ENST00000490653 TAS2R7Q9NYW3 318 aa6.63□□□□□ -1.35
PRPF4B-208ENST00000490653 KLRF1Q9NZS2 232 aa6.63□□□□□ -1.35
PRPF4B-208ENST00000490653 ZDHHC2Q9UIJ5 367 aa6.63□□□□□ -1.35
PRPF4B-208ENST00000490653 C19orf53Q9UNZ5 99 aaPredicted RBP6.63□□□□□ -1.35
PRPF4B-208ENST00000490653 TRAF6Q9Y4K3 522 aa6.63□□□□□ -1.35
PRPF4B-208ENST00000490653 DNAJC15Q9Y5T4 150 aa6.63□□□□□ -1.35
PRPF4B-208ENST00000490653 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.62□□□□□ -1.35
PRPF4B-208ENST00000490653 WDR91A4D1P6 747 aa6.62□□□□□ -1.35
PRPF4B-208ENST00000490653 SYT5O00445 386 aa6.62□□□□□ -1.35
PRPF4B-208ENST00000490653 PLOD2O00469 737 aa6.62□□□□□ -1.35
PRPF4B-208ENST00000490653 ITM2AO43736 263 aa6.62□□□□□ -1.35
PRPF4B-208ENST00000490653 CDH16O75309 829 aa6.62□□□□□ -1.35
PRPF4B-208ENST00000490653 BCAS2O75934 225 aaPredicted RBP6.62□□□□□ -1.35
PRPF4B-208ENST00000490653 RSL1D1O76021 490 aaKnown RBP6.62□□□□□ -1.35
PRPF4B-208ENST00000490653 SLU7O95391 586 aaKnown RBP6.62□□□□□ -1.35
PRPF4B-208ENST00000490653 PSMG1O95456 288 aa6.62□□□□□ -1.35
PRPF4B-208ENST00000490653 TGM6O95932 706 aa6.62□□□□□ -1.35
PRPF4B-208ENST00000490653 ACP2P11117 423 aa6.62□□□□□ -1.35
PRPF4B-208ENST00000490653 SDC1P18827 310 aa6.62□□□□□ -1.35
PRPF4B-208ENST00000490653 GRK2P25098 689 aa6.62□□□□□ -1.35
PRPF4B-208ENST00000490653 UQCRC1P31930 480 aa6.62□□□□□ -1.35
PRPF4B-208ENST00000490653 GABRA3P34903 492 aa6.62□□□□□ -1.35
PRPF4B-208ENST00000490653 MPIP34949 423 aa6.62□□□□□ -1.35
PRPF4B-208ENST00000490653 TIMP3P35625 211 aa6.62□□□□□ -1.35
PRPF4B-208ENST00000490653 RFX3P48380 749 aa6.62□□□□□ -1.35
PRPF4B-208ENST00000490653 TMED10P49755 219 aaKnown RBP6.62□□□□□ -1.35
PRPF4B-208ENST00000490653 LHX2P50458 406 aa6.62□□□□□ -1.35
PRPF4B-208ENST00000490653 SUCLG1P53597 346 aaKnown RBP6.62□□□□□ -1.35
PRPF4B-208ENST00000490653 PNLIPRP2P54317 469 aa6.62□□□□□ -1.35
PRPF4B-208ENST00000490653 PRKAG1P54619 331 aa6.62□□□□□ -1.35
PRPF4B-208ENST00000490653 GFRA1P56159 465 aa6.62□□□□□ -1.35
PRPF4B-208ENST00000490653 RPP38P78345 283 aaKnown RBP6.62□□□□□ -1.35
PRPF4B-208ENST00000490653 ZNF155Q12901 538 aaPredicted RBP6.62□□□□□ -1.35
PRPF4B-208ENST00000490653 STX5Q13190 355 aa6.62□□□□□ -1.35
PRPF4B-208ENST00000490653 ERCC6LQ2NKX8 1250 aa6.62□□□□□ -1.35
PRPF4B-208ENST00000490653 GALNTL6Q49A17 601 aa6.62□□□□□ -1.35
PRPF4B-208ENST00000490653 KANK2Q63ZY3 851 aa6.62□□□□□ -1.35
PRPF4B-208ENST00000490653 NSUN5P2Q63ZY6 315 aa6.62□□□□□ -1.35
PRPF4B-208ENST00000490653 OR2M3Q8NG83 312 aa6.62□□□□□ -1.35
PRPF4B-208ENST00000490653 OR14L1PQ8NHC6 308 aa6.62□□□□□ -1.35
PRPF4B-208ENST00000490653 FBXO30Q8TB52 745 aa6.62□□□□□ -1.35
PRPF4B-208ENST00000490653 AENQ8WTP8 325 aaKnown RBP6.62□□□□□ -1.35
PRPF4B-208ENST00000490653 DUSP19Q8WTR2 217 aa6.62□□□□□ -1.35
PRPF4B-208ENST00000490653 TMCO6Q96DC7 493 aa6.62□□□□□ -1.35
PRPF4B-208ENST00000490653 GIMAP5Q96F15 307 aa6.62□□□□□ -1.35
PRPF4B-208ENST00000490653 SH3GL2Q99962 352 aa6.62□□□□□ -1.35
PRPF4B-208ENST00000490653 ZNF559Q9BR84 538 aa6.62□□□□□ -1.35
PRPF4B-208ENST00000490653 EQTNQ9NQ60 294 aa6.62□□□□□ -1.35
PRPF4B-208ENST00000490653 MIEF1Q9NQG6 463 aa6.62□□□□□ -1.35
PRPF4B-208ENST00000490653 RRAGDQ9NQL2 400 aaPredicted RBP6.62□□□□□ -1.35
PRPF4B-208ENST00000490653 DLL4Q9NR61 685 aa6.62□□□□□ -1.35
PRPF4B-208ENST00000490653 GIMAP4Q9NUV9 329 aa6.62□□□□□ -1.35
PRPF4B-208ENST00000490653 C1orf109Q9NX04 203 aa6.62□□□□□ -1.35
PRPF4B-208ENST00000490653 TAS2R10Q9NYW0 307 aa6.62□□□□□ -1.35
PRPF4B-208ENST00000490653 CRIM1Q9NZV1 1036 aa6.62□□□□□ -1.35
PRPF4B-208ENST00000490653 SH3BP4Q9P0V3 963 aa6.62□□□□□ -1.35
PRPF4B-208ENST00000490653 B4GALT7Q9UBV7 327 aa6.62□□□□□ -1.35
PRPF4B-208ENST00000490653 CBLCQ9ULV8 474 aa6.62□□□□□ -1.35
PRPF4B-208ENST00000490653 STK38LQ9Y2H1 464 aa6.62□□□□□ -1.35
PRPF4B-208ENST00000490653 PCDHGB3Q9Y5G1 929 aa6.62□□□□□ -1.35
PRPF4B-208ENST00000490653 AKAP6Q13023 2319 aa6.61□□□□□ -1.35
PRPF4B-208ENST00000490653 A0A087WV62 115 aa6.61□□□□□ -1.35
PRPF4B-208ENST00000490653 MBD3L4A6NDZ8 208 aaPredicted RBP6.61□□□□□ -1.35
PRPF4B-208ENST00000490653 MBD3L3A6NE82 208 aaPredicted RBP6.61□□□□□ -1.35
PRPF4B-208ENST00000490653 MBD3L5A6NJ08 208 aaPredicted RBP6.61□□□□□ -1.35
PRPF4B-208ENST00000490653 CD8B2A6NJW9 211 aa6.61□□□□□ -1.35
PRPF4B-208ENST00000490653 CLCA1A8K7I4 914 aa6.61□□□□□ -1.35
PRPF4B-208ENST00000490653 HSPB2A8KAH6 182 aa6.61□□□□□ -1.35
PRPF4B-208ENST00000490653 PIP5K1BO14986 540 aa6.61□□□□□ -1.35
PRPF4B-208ENST00000490653 LSM1O15116 133 aaKnown RBP6.61□□□□□ -1.35
PRPF4B-208ENST00000490653 PEX11AO75192 247 aa6.61□□□□□ -1.35
PRPF4B-208ENST00000490653 LYPLA1O75608 230 aaPredicted RBP6.61□□□□□ -1.35
PRPF4B-208ENST00000490653 CTAG2O75638 210 aa6.61□□□□□ -1.35
PRPF4B-208ENST00000490653 UTS2O95399 124 aa6.61□□□□□ -1.35
PRPF4B-208ENST00000490653 OPN1LWP04000 364 aa6.61□□□□□ -1.35
PRPF4B-208ENST00000490653 FGF4P08620 206 aa6.61□□□□□ -1.35
PRPF4B-208ENST00000490653 NUDT17P0C025 328 aa6.61□□□□□ -1.35
PRPF4B-208ENST00000490653 BCKDHAP12694 445 aa6.61□□□□□ -1.35
PRPF4B-208ENST00000490653 CPN1P15169 458 aa6.61□□□□□ -1.35
PRPF4B-208ENST00000490653 PRPH2P23942 346 aa6.61□□□□□ -1.35
PRPF4B-208ENST00000490653 DPP4P27487 766 aa6.61□□□□□ -1.35
PRPF4B-208ENST00000490653 IL12BP29460 328 aa6.61□□□□□ -1.35
PRPF4B-208ENST00000490653 SRD5A2P31213 254 aa6.61□□□□□ -1.35
PRPF4B-208ENST00000490653 ADMP35318 185 aa6.61□□□□□ -1.35
PRPF4B-208ENST00000490653 MAP3K8P41279 467 aa6.61□□□□□ -1.35
PRPF4B-208ENST00000490653 CLDN18P56856 261 aa6.61□□□□□ -1.35
PRPF4B-208ENST00000490653 RPL38P63173 70 aaKnown RBP6.61□□□□□ -1.35
PRPF4B-208ENST00000490653 HSPB3Q12988 150 aa6.61□□□□□ -1.35
PRPF4B-208ENST00000490653 MYBPHQ13203 477 aa6.61□□□□□ -1.35
PRPF4B-208ENST00000490653 SNTA1Q13424 505 aa6.61□□□□□ -1.35
PRPF4B-208ENST00000490653 EFR3AQ14156 821 aa6.61□□□□□ -1.35
PRPF4B-208ENST00000490653 MPP2Q14168 576 aa6.61□□□□□ -1.35
PRPF4B-208ENST00000490653 HSPB2Q16082 182 aa6.61□□□□□ -1.35
PRPF4B-208ENST00000490653 SLC25A35Q3KQZ1 300 aa6.61□□□□□ -1.35
PRPF4B-208ENST00000490653 GRAMD1BQ3KR37 738 aa6.61□□□□□ -1.35
PRPF4B-208ENST00000490653 CDPF1Q6NVV7 123 aa6.61□□□□□ -1.35
PRPF4B-208ENST00000490653 OLIG3Q7RTU3 272 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms