RNA–Protein interactions for RNA: ENST00000486085.5

RTN4-214, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-214ENST00000486085 KRT13P13646 458 aa4.88□□□□□ -1.63
RTN4-214ENST00000486085 ANXA13P27216 316 aa4.88□□□□□ -1.63
RTN4-214ENST00000486085 HNRNPH3P31942 346 aaKnown RBP4.88□□□□□ -1.63
RTN4-214ENST00000486085 KCNK10P57789 538 aa4.88□□□□□ -1.63
RTN4-214ENST00000486085 INCA1Q0VD86 236 aa4.88□□□□□ -1.63
RTN4-214ENST00000486085 RPA4Q13156 261 aa4.88□□□□□ -1.63
RTN4-214ENST00000486085 TPD52L1Q16890 204 aaPredicted RBP4.88□□□□□ -1.63
RTN4-214ENST00000486085 ECSCRQ19T08 205 aa4.88□□□□□ -1.63
RTN4-214ENST00000486085 FILIP1LQ4L180 1135 aa4.88□□□□□ -1.63
RTN4-214ENST00000486085 CD164L2Q6UWJ8 174 aa4.88□□□□□ -1.63
RTN4-214ENST00000486085 ZNF730Q6ZMV8 503 aa4.88□□□□□ -1.63
RTN4-214ENST00000486085 LUZP1Q86V48 1076 aa4.88□□□□□ -1.63
RTN4-214ENST00000486085 EFCAB13Q8IY85 973 aa4.88□□□□□ -1.63
RTN4-214ENST00000486085 LRRC43Q8N309 656 aa4.88□□□□□ -1.63
RTN4-214ENST00000486085 CARNMT1Q8N4J0 409 aa4.88□□□□□ -1.63
RTN4-214ENST00000486085 FBXL13Q8NEE6 735 aa4.88□□□□□ -1.63
RTN4-214ENST00000486085 C11orf52Q96A22 123 aa4.88□□□□□ -1.63
RTN4-214ENST00000486085 PCED1BQ96HM7 432 aa4.88□□□□□ -1.63
RTN4-214ENST00000486085 CPB2Q96IY4 423 aa4.88□□□□□ -1.63
RTN4-214ENST00000486085 ZNF597Q96LX8 424 aa4.88□□□□□ -1.63
RTN4-214ENST00000486085 CASD1Q96PB1 797 aa4.88□□□□□ -1.63
RTN4-214ENST00000486085 AGPAT1Q99943 283 aa4.88□□□□□ -1.63
RTN4-214ENST00000486085 FAM213AQ9BRX8 229 aa4.88□□□□□ -1.63
RTN4-214ENST00000486085 CHCHD5Q9BSY4 110 aa4.88□□□□□ -1.63
RTN4-214ENST00000486085 TCHPQ9BT92 498 aa4.88□□□□□ -1.63
RTN4-214ENST00000486085 NUP58Q9BVL2 599 aa4.88□□□□□ -1.63
RTN4-214ENST00000486085 UBXN6Q9BZV1 441 aa4.88□□□□□ -1.63
RTN4-214ENST00000486085 TRIM6Q9C030 488 aaPredicted RBP4.88□□□□□ -1.63
RTN4-214ENST00000486085 TUBB1Q9H4B7 451 aa4.88□□□□□ -1.63
RTN4-214ENST00000486085 NXF3Q9H4D5 531 aaKnown RBP4.88□□□□□ -1.63
RTN4-214ENST00000486085 MARCH7Q9H992 704 aa4.88□□□□□ -1.63
RTN4-214ENST00000486085 CYP3A43Q9HB55 503 aa4.88□□□□□ -1.63
RTN4-214ENST00000486085 POLD4Q9HCU8 107 aa4.88□□□□□ -1.63
RTN4-214ENST00000486085 CTSZQ9UBR2 303 aa4.88□□□□□ -1.63
RTN4-214ENST00000486085 UBQLN2Q9UHD9 624 aa4.88□□□□□ -1.63
RTN4-214ENST00000486085 FOXA2Q9Y261 457 aaPredicted RBP4.88□□□□□ -1.63
RTN4-214ENST00000486085 ATP8B3O60423 1300 aa4.88□□□□□ -1.63
RTN4-214ENST00000486085 TNRC18O15417 2968 aaPredicted RBP4.88□□□□□ -1.63
RTN4-214ENST00000486085 PTPRSQ13332 1948 aa4.87□□□□□ -1.63
RTN4-214ENST00000486085 C5orf67F2Z3F1 127 aa4.87□□□□□ -1.63
RTN4-214ENST00000486085 CCSO14618 274 aa4.87□□□□□ -1.63
RTN4-214ENST00000486085 PI15O43692 258 aa4.87□□□□□ -1.63
RTN4-214ENST00000486085 CSO75390 466 aaKnown RBP4.87□□□□□ -1.63
RTN4-214ENST00000486085 CSDE1O75534 798 aaKnown RBP4.87□□□□□ -1.63
RTN4-214ENST00000486085 OR6A2O95222 327 aa4.87□□□□□ -1.63
RTN4-214ENST00000486085 GPX3P22352 226 aa4.87□□□□□ -1.63
RTN4-214ENST00000486085 STIP1P31948 543 aaKnown RBP4.87□□□□□ -1.63
RTN4-214ENST00000486085 ID1P41134 155 aa4.87□□□□□ -1.63
RTN4-214ENST00000486085 TNFSF9P41273 254 aa4.87□□□□□ -1.63
RTN4-214ENST00000486085 ACOT2P49753 483 aa4.87□□□□□ -1.63
RTN4-214ENST00000486085 ATP4BP51164 291 aa4.87□□□□□ -1.63
RTN4-214ENST00000486085 STX17P56962 302 aa4.87□□□□□ -1.63
RTN4-214ENST00000486085 RPS27AP62979 156 aaKnown RBP4.87□□□□□ -1.63
RTN4-214ENST00000486085 SRPXP78539 464 aa4.87□□□□□ -1.63
RTN4-214ENST00000486085 NPRL3Q12980 569 aa4.87□□□□□ -1.63
RTN4-214ENST00000486085 GK2Q14410 553 aaPredicted RBP4.87□□□□□ -1.63
RTN4-214ENST00000486085 HEPACAMQ14CZ8 416 aa4.87□□□□□ -1.63
RTN4-214ENST00000486085 LPAL2Q16609 132 aa4.87□□□□□ -1.63
RTN4-214ENST00000486085 EXOC3L4Q17RC7 722 aa4.87□□□□□ -1.63
RTN4-214ENST00000486085 C2orf76Q3KRA6 126 aa4.87□□□□□ -1.63
RTN4-214ENST00000486085 CCDC40Q4G0X9 1142 aa4.87□□□□□ -1.63
RTN4-214ENST00000486085 CLLU1OSQ5K130 101 aa4.87□□□□□ -1.63
RTN4-214ENST00000486085 TAF3Q5VWG9 929 aa4.87□□□□□ -1.63
RTN4-214ENST00000486085 SPECC1LQ69YQ0 1117 aa4.87□□□□□ -1.63
RTN4-214ENST00000486085 RAPH1Q70E73 1250 aa4.87□□□□□ -1.63
RTN4-214ENST00000486085 GTSCR1Q86UQ5 136 aa4.87□□□□□ -1.63
RTN4-214ENST00000486085 CARM1Q86X55 608 aa4.87□□□□□ -1.63
RTN4-214ENST00000486085 RNF130Q86XS8 419 aa4.87□□□□□ -1.63
RTN4-214ENST00000486085 VSTM4Q8IW00 320 aa4.87□□□□□ -1.63
RTN4-214ENST00000486085 STHQ8IWL8 128 aa4.87□□□□□ -1.63
RTN4-214ENST00000486085 ABHD12Q8N2K0 398 aa4.87□□□□□ -1.63
RTN4-214ENST00000486085 TMEM86AQ8N2M4 240 aa4.87□□□□□ -1.63
RTN4-214ENST00000486085 Q8N377 158 aa4.87□□□□□ -1.63
RTN4-214ENST00000486085 FBXW8Q8N3Y1 598 aa4.87□□□□□ -1.63
RTN4-214ENST00000486085 ANKRD36BP1Q96IX9 119 aa4.87□□□□□ -1.63
RTN4-214ENST00000486085 ZNF560Q96MR9 790 aa4.87□□□□□ -1.63
RTN4-214ENST00000486085 NUSAP1Q9BXS6 441 aaKnown RBP4.87□□□□□ -1.63
RTN4-214ENST00000486085 STRADBQ9C0K7 418 aa4.87□□□□□ -1.63
RTN4-214ENST00000486085 TSPYL1Q9H0U9 437 aa4.87□□□□□ -1.63
RTN4-214ENST00000486085 ZCCHC3Q9NUD5 404 aaKnown RBP4.87□□□□□ -1.63
RTN4-214ENST00000486085 RAB20Q9NX57 234 aa4.87□□□□□ -1.63
RTN4-214ENST00000486085 TEKT2Q9UIF3 430 aa4.87□□□□□ -1.63
RTN4-214ENST00000486085 GINS2Q9Y248 185 aa4.87□□□□□ -1.63
RTN4-214ENST00000486085 CHD9Q3L8U1 2897 aa4.87□□□□□ -1.63
RTN4-214ENST00000486085 PTPRJQ12913 1337 aa4.87□□□□□ -1.63
RTN4-214ENST00000486085 TRANK1O15050 2925 aa4.87□□□□□ -1.63
RTN4-214ENST00000486085 TRIP11Q15643 1979 aa4.87□□□□□ -1.63
RTN4-214ENST00000486085 LAMA2P24043 3122 aaKnown RBP4.87□□□□□ -1.63
RTN4-214ENST00000486085 CDH23Q9H251 3354 aa4.87□□□□□ -1.63
RTN4-214ENST00000486085 NEDD8-MDP1E9PL57 170 aa4.86□□□□□ -1.63
RTN4-214ENST00000486085 NOL4O94818 638 aa4.86□□□□□ -1.63
RTN4-214ENST00000486085 HPRP00739 348 aa4.86□□□□□ -1.63
RTN4-214ENST00000486085 TNNC2P02585 160 aa4.86□□□□□ -1.63
RTN4-214ENST00000486085 UCHL3P15374 230 aa4.86□□□□□ -1.63
RTN4-214ENST00000486085 FERP16591 822 aa4.86□□□□□ -1.63
RTN4-214ENST00000486085 MTIF2P46199 727 aaKnown RBP4.86□□□□□ -1.63
RTN4-214ENST00000486085 TAF6P49848 677 aa4.86□□□□□ -1.63
RTN4-214ENST00000486085 CCL23P55773 120 aa4.86□□□□□ -1.63
RTN4-214ENST00000486085 MFGE8Q08431 387 aaPredicted RBP4.86□□□□□ -1.63
RTN4-214ENST00000486085 SMARCB1Q12824 385 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms