RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 HBA1P69905 142 aa11.14□□□□□ -0.63
MSH5-216ENST00000484309 POU6F2P78424 691 aaPredicted RBP11.14□□□□□ -0.63
MSH5-216ENST00000484309 TFF3Q07654 80 aa11.14□□□□□ -0.63
MSH5-216ENST00000484309 LSM12Q3MHD2 195 aaKnown RBP11.14□□□□□ -0.63
MSH5-216ENST00000484309 RIPPLY2Q5TAB7 128 aa11.14□□□□□ -0.63
MSH5-216ENST00000484309 ANKRD46Q86W74 232 aa11.14□□□□□ -0.63
MSH5-216ENST00000484309 PM20D2Q8IYS1 436 aa11.14□□□□□ -0.63
MSH5-216ENST00000484309 FADS6Q8N9I5 356 aa11.14□□□□□ -0.63
MSH5-216ENST00000484309 DUSP19Q8WTR2 217 aa11.14□□□□□ -0.63
MSH5-216ENST00000484309 TUBA1CQ9BQE3 449 aa11.14□□□□□ -0.63
MSH5-216ENST00000484309 TRIM8Q9BZR9 551 aa11.14□□□□□ -0.63
MSH5-216ENST00000484309 DPY30Q9C005 99 aa11.14□□□□□ -0.63
MSH5-216ENST00000484309 BHLHE41Q9C0J9 482 aaPredicted RBP11.14□□□□□ -0.63
MSH5-216ENST00000484309 MEAF6Q9HAF1 191 aa11.14□□□□□ -0.63
MSH5-216ENST00000484309 SDHAF3Q9NRP4 125 aa11.14□□□□□ -0.63
MSH5-216ENST00000484309 GIN1Q9NXP7 522 aa11.14□□□□□ -0.63
MSH5-216ENST00000484309 PCDHGB3Q9Y5G1 929 aa11.14□□□□□ -0.63
MSH5-216ENST00000484309 KCNE3Q9Y6H6 103 aa11.14□□□□□ -0.63
MSH5-216ENST00000484309 MPDZO75970 2070 aa11.13□□□□□ -0.63
MSH5-216ENST00000484309 SHISA8B8ZZ34 492 aa11.13□□□□□ -0.63
MSH5-216ENST00000484309 ZIC3O60481 467 aa11.13□□□□□ -0.63
MSH5-216ENST00000484309 SNNO75324 88 aaPredicted RBP11.13□□□□□ -0.63
MSH5-216ENST00000484309 SNUPNO95149 360 aaKnown RBP11.13□□□□□ -0.63
MSH5-216ENST00000484309 CPSF4O95639 269 aaKnown RBP11.13□□□□□ -0.63
MSH5-216ENST00000484309 OXSR1O95747 527 aaPredicted RBP11.13□□□□□ -0.63
MSH5-216ENST00000484309 ALDOCP09972 364 aaKnown RBP11.13□□□□□ -0.63
MSH5-216ENST00000484309 BMP5P22003 454 aa11.13□□□□□ -0.63
MSH5-216ENST00000484309 EPHA3P29320 983 aa11.13□□□□□ -0.63
MSH5-216ENST00000484309 LHX2P50458 406 aa11.13□□□□□ -0.63
MSH5-216ENST00000484309 AGFG1P52594 562 aaKnown RBP11.13□□□□□ -0.63
MSH5-216ENST00000484309 CASP9P55211 416 aa11.13□□□□□ -0.63
MSH5-216ENST00000484309 DSCR4P56555 118 aaPredicted RBP11.13□□□□□ -0.63
MSH5-216ENST00000484309 B3GALT5-AS1P59052 145 aa11.13□□□□□ -0.63
MSH5-216ENST00000484309 SNTB1Q13884 538 aaKnown RBP11.13□□□□□ -0.63
MSH5-216ENST00000484309 SMU1Q2TAY7 513 aa11.13□□□□□ -0.63
MSH5-216ENST00000484309 EXOSC6Q5RKV6 272 aaKnown RBP11.13□□□□□ -0.63
MSH5-216ENST00000484309 RAET1LQ5VY80 246 aa11.13□□□□□ -0.63
MSH5-216ENST00000484309 CDC73Q6P1J9 531 aa11.13□□□□□ -0.63
MSH5-216ENST00000484309 ENPP6Q6UWR7 440 aa11.13□□□□□ -0.63
MSH5-216ENST00000484309 GDF7Q7Z4P5 450 aa11.13□□□□□ -0.63
MSH5-216ENST00000484309 LACC1Q8IV20 430 aa11.13□□□□□ -0.63
MSH5-216ENST00000484309 UBQLNLQ8IYU4 475 aa11.13□□□□□ -0.63
MSH5-216ENST00000484309 ZNF295-AS1Q8N0V1 137 aa11.13□□□□□ -0.63
MSH5-216ENST00000484309 RELL2Q8NC24 303 aaPredicted RBP11.13□□□□□ -0.63
MSH5-216ENST00000484309 OR56A1Q8NGH5 318 aa11.13□□□□□ -0.63
MSH5-216ENST00000484309 OR5D16Q8NGK9 328 aa11.13□□□□□ -0.63
MSH5-216ENST00000484309 OR4A15Q8NGL6 344 aa11.13□□□□□ -0.63
MSH5-216ENST00000484309 OR4C3Q8NH37 302 aa11.13□□□□□ -0.63
MSH5-216ENST00000484309 MARK4Q96L34 752 aa11.13□□□□□ -0.63
MSH5-216ENST00000484309 ACTRT3Q9BYD9 372 aa11.13□□□□□ -0.63
MSH5-216ENST00000484309 WDR55Q9H6Y2 383 aaPredicted RBP11.13□□□□□ -0.63
MSH5-216ENST00000484309 RUBCNLQ9H714 662 aa11.13□□□□□ -0.63
MSH5-216ENST00000484309 MANSC1Q9H8J5 431 aa11.13□□□□□ -0.63
MSH5-216ENST00000484309 THAP1Q9NVV9 213 aa11.13□□□□□ -0.63
MSH5-216ENST00000484309 GPATCH2Q9NW75 528 aa11.13□□□□□ -0.63
MSH5-216ENST00000484309 FAF1Q9UNN5 650 aaPredicted RBP11.13□□□□□ -0.63
MSH5-216ENST00000484309 LRBAP50851 2863 aa11.13□□□□□ -0.63
MSH5-216ENST00000484309 CREBBPQ92793 2442 aa11.13□□□□□ -0.63
MSH5-216ENST00000484309 RNF103-CHMP3A0A140T963 221 aa11.12□□□□□ -0.63
MSH5-216ENST00000484309 CLCA1A8K7I4 914 aa11.12□□□□□ -0.63
MSH5-216ENST00000484309 ANKRD28O15084 1053 aa11.12□□□□□ -0.63
MSH5-216ENST00000484309 IL2RAP01589 272 aa11.12□□□□□ -0.63
MSH5-216ENST00000484309 MSX1P28360 303 aa11.12□□□□□ -0.63
MSH5-216ENST00000484309 ZNF136P52737 540 aa11.12□□□□□ -0.63
MSH5-216ENST00000484309 CLDN18P56856 261 aa11.12□□□□□ -0.63
MSH5-216ENST00000484309 C21orf58P58505 322 aa11.12□□□□□ -0.63
MSH5-216ENST00000484309 PHC1P78364 1004 aa11.12□□□□□ -0.63
MSH5-216ENST00000484309 OCRLQ01968 901 aa11.12□□□□□ -0.63
MSH5-216ENST00000484309 RCAN2Q14206 197 aa11.12□□□□□ -0.63
MSH5-216ENST00000484309 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.12□□□□□ -0.63
MSH5-216ENST00000484309 SPANXN4Q5MJ08 99 aa11.12□□□□□ -0.63
MSH5-216ENST00000484309 AGBL2Q5U5Z8 902 aa11.12□□□□□ -0.63
MSH5-216ENST00000484309 NSUN5P2Q63ZY6 315 aa11.12□□□□□ -0.63
MSH5-216ENST00000484309 ATG16L1Q676U5 607 aa11.12□□□□□ -0.63
MSH5-216ENST00000484309 AAGABQ6PD74 315 aa11.12□□□□□ -0.63
MSH5-216ENST00000484309 ZCCHC12Q6PEW1 402 aa11.12□□□□□ -0.63
MSH5-216ENST00000484309 ARSKQ6UWY0 536 aa11.12□□□□□ -0.63
MSH5-216ENST00000484309 OLIG3Q7RTU3 272 aa11.12□□□□□ -0.63
MSH5-216ENST00000484309 CAMKMTQ7Z624 323 aa11.12□□□□□ -0.63
MSH5-216ENST00000484309 WDR75Q8IWA0 830 aaKnown RBP11.12□□□□□ -0.63
MSH5-216ENST00000484309 KIRREL3Q8IZU9 778 aa11.12□□□□□ -0.63
MSH5-216ENST00000484309 NATD1Q8N6N6 113 aa11.12□□□□□ -0.63
MSH5-216ENST00000484309 C9orf106Q8NAJ2 232 aa11.12□□□□□ -0.63
MSH5-216ENST00000484309 PSMA8Q8TAA3 256 aa11.12□□□□□ -0.63
MSH5-216ENST00000484309 FAM110BQ8TC76 370 aa11.12□□□□□ -0.63
MSH5-216ENST00000484309 SFXN5Q8TD22 340 aa11.12□□□□□ -0.63
MSH5-216ENST00000484309 ADAMTS15Q8TE58 950 aa11.12□□□□□ -0.63
MSH5-216ENST00000484309 SMPDL3BQ92485 455 aa11.12□□□□□ -0.63
MSH5-216ENST00000484309 C1GALT1C1Q96EU7 318 aa11.12□□□□□ -0.63
MSH5-216ENST00000484309 SH3YL1Q96HL8 342 aaPredicted RBP11.12□□□□□ -0.63
MSH5-216ENST00000484309 OR7D2Q96RA2 312 aa11.12□□□□□ -0.63
MSH5-216ENST00000484309 KLHDC3Q9BQ90 382 aa11.12□□□□□ -0.63
MSH5-216ENST00000484309 G6PC3Q9BUM1 346 aa11.12□□□□□ -0.63
MSH5-216ENST00000484309 BTBD2Q9BX70 525 aa11.12□□□□□ -0.63
MSH5-216ENST00000484309 ENKD1Q9H0I2 346 aa11.12□□□□□ -0.63
MSH5-216ENST00000484309 PIGUQ9H490 435 aa11.12□□□□□ -0.63
MSH5-216ENST00000484309 SERHL2Q9H4I8 314 aa11.12□□□□□ -0.63
MSH5-216ENST00000484309 PTGES2Q9H7Z7 377 aa11.12□□□□□ -0.63
MSH5-216ENST00000484309 NEUROD4Q9HD90 331 aa11.12□□□□□ -0.63
MSH5-216ENST00000484309 VDAC3Q9Y277 283 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms