RNA–Protein interactions for RNA: ENST00000482140.5

OPTN-210, Transcript of optineurin, humanhuman

TSL 3

Gene OPTN, Length 667 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-210ENST00000482140 MED11Q9P086 117 aa13.46□□□□□ -0.25
OPTN-210ENST00000482140 MARCOQ9UEW3 520 aaPredicted RBP13.46□□□□□ -0.25
OPTN-210ENST00000482140 PCDHGB4Q9UN71 923 aa13.46□□□□□ -0.25
OPTN-210ENST00000482140 TRPC5OSA6NMA1 111 aa13.45□□□□□ -0.26
OPTN-210ENST00000482140 C17orf51A8MQB3 221 aa13.45□□□□□ -0.26
OPTN-210ENST00000482140 SLCO1B7G3V0H7 640 aa13.45□□□□□ -0.26
OPTN-210ENST00000482140 SNNO75324 88 aaPredicted RBP13.45□□□□□ -0.26
OPTN-210ENST00000482140 ANGPTL1O95841 491 aa13.45□□□□□ -0.26
OPTN-210ENST00000482140 HK1P19367 917 aa13.45□□□□□ -0.26
OPTN-210ENST00000482140 ATP6V1C1P21283 382 aa13.45□□□□□ -0.26
OPTN-210ENST00000482140 LCN1P31025 176 aa13.45□□□□□ -0.26
OPTN-210ENST00000482140 CLNS1AP54105 237 aaKnown RBP13.45□□□□□ -0.26
OPTN-210ENST00000482140 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.45□□□□□ -0.26
OPTN-210ENST00000482140 SLC25A35Q3KQZ1 300 aa13.45□□□□□ -0.26
OPTN-210ENST00000482140 RAET1LQ5VY80 246 aa13.45□□□□□ -0.26
OPTN-210ENST00000482140 NSUN5P2Q63ZY6 315 aa13.45□□□□□ -0.26
OPTN-210ENST00000482140 CDC73Q6P1J9 531 aa13.45□□□□□ -0.26
OPTN-210ENST00000482140 FADS6Q8N9I5 356 aa13.45□□□□□ -0.26
OPTN-210ENST00000482140 VPS37AQ8NEZ2 397 aa13.45□□□□□ -0.26
OPTN-210ENST00000482140 OR5AK3PQ8NH89 298 aa13.45□□□□□ -0.26
OPTN-210ENST00000482140 PSMA8Q8TAA3 256 aa13.45□□□□□ -0.26
OPTN-210ENST00000482140 CDS1Q92903 461 aa13.45□□□□□ -0.26
OPTN-210ENST00000482140 SPOCK3Q9BQ16 436 aa13.45□□□□□ -0.26
OPTN-210ENST00000482140 PIGUQ9H490 435 aa13.45□□□□□ -0.26
OPTN-210ENST00000482140 ARGLU1Q9NWB6 273 aaPredicted RBP13.45□□□□□ -0.26
OPTN-210ENST00000482140 PCNX3Q9H6A9 2034 aa13.45□□□□□ -0.26
OPTN-210ENST00000482140 NOTCH2Q04721 2471 aa13.44□□□□□ -0.26
OPTN-210ENST00000482140 CD8B2A6NJW9 211 aa13.44□□□□□ -0.26
OPTN-210ENST00000482140 SCDO00767 359 aa13.44□□□□□ -0.26
OPTN-210ENST00000482140 SDHDO14521 159 aa13.44□□□□□ -0.26
OPTN-210ENST00000482140 DVL2O14641 736 aa13.44□□□□□ -0.26
OPTN-210ENST00000482140 HDAC3O15379 428 aa13.44□□□□□ -0.26
OPTN-210ENST00000482140 NDUFB5O43674 189 aa13.44□□□□□ -0.26
OPTN-210ENST00000482140 GMFGO60234 142 aa13.44□□□□□ -0.26
OPTN-210ENST00000482140 ZIC3O60481 467 aa13.44□□□□□ -0.26
OPTN-210ENST00000482140 TOXO94900 526 aa13.44□□□□□ -0.26
OPTN-210ENST00000482140 SOX30O94993 753 aa13.44□□□□□ -0.26
OPTN-210ENST00000482140 OXSR1O95747 527 aaPredicted RBP13.44□□□□□ -0.26
OPTN-210ENST00000482140 CPN1P15169 458 aa13.44□□□□□ -0.26
OPTN-210ENST00000482140 CHMP24386 653 aa13.44□□□□□ -0.26
OPTN-210ENST00000482140 TIMP3P35625 211 aa13.44□□□□□ -0.26
OPTN-210ENST00000482140 GFRA1P56159 465 aa13.44□□□□□ -0.26
OPTN-210ENST00000482140 WNT3P56703 355 aa13.44□□□□□ -0.26
OPTN-210ENST00000482140 HBA1P69905 142 aa13.44□□□□□ -0.26
OPTN-210ENST00000482140 DPY19L1Q2PZI1 675 aa13.44□□□□□ -0.26
OPTN-210ENST00000482140 CCNJQ5T5M9 372 aa13.44□□□□□ -0.26
OPTN-210ENST00000482140 ANXA8L1Q5VT79 327 aa13.44□□□□□ -0.26
OPTN-210ENST00000482140 NXNQ6DKJ4 435 aa13.44□□□□□ -0.26
OPTN-210ENST00000482140 OGFOD2Q6N063 350 aa13.44□□□□□ -0.26
OPTN-210ENST00000482140 SEM1Q6ZVN7 128 aa13.44□□□□□ -0.26
OPTN-210ENST00000482140 SPATA19Q7Z5L4 167 aa13.44□□□□□ -0.26
OPTN-210ENST00000482140 CLECL1Q8IZS7 167 aa13.44□□□□□ -0.26
OPTN-210ENST00000482140 GOLGA6L1Q8N7Z2 621 aa13.44□□□□□ -0.26
OPTN-210ENST00000482140 TNIP2Q8NFZ5 429 aa13.44□□□□□ -0.26
OPTN-210ENST00000482140 OR8J2Q8NGG1 315 aa13.44□□□□□ -0.26
OPTN-210ENST00000482140 OR4A15Q8NGL6 344 aa13.44□□□□□ -0.26
OPTN-210ENST00000482140 FAM110BQ8TC76 370 aa13.44□□□□□ -0.26
OPTN-210ENST00000482140 ZPLD1Q8TCW7 415 aa13.44□□□□□ -0.26
OPTN-210ENST00000482140 DOCK7Q96N67 2140 aa13.44□□□□□ -0.26
OPTN-210ENST00000482140 RTN4RQ9BZR6 473 aa13.44□□□□□ -0.26
OPTN-210ENST00000482140 CALHM2Q9HA72 323 aa13.44□□□□□ -0.26
OPTN-210ENST00000482140 UBQLN4Q9NRR5 601 aa13.44□□□□□ -0.26
OPTN-210ENST00000482140 GIN1Q9NXP7 522 aa13.44□□□□□ -0.26
OPTN-210ENST00000482140 GOLGA8QA0A0J9YX86 632 aa13.43□□□□□ -0.26
OPTN-210ENST00000482140 RNF103-CHMP3A0A140T963 221 aa13.43□□□□□ -0.26
OPTN-210ENST00000482140 GOLGA8OA6NCC3 632 aa13.43□□□□□ -0.26
OPTN-210ENST00000482140 KDM4EB2RXH2 506 aaPredicted RBP13.43□□□□□ -0.26
OPTN-210ENST00000482140 ALG1L2C9J202 215 aa13.43□□□□□ -0.26
OPTN-210ENST00000482140 GOLGA8NF8WBI6 632 aa13.43□□□□□ -0.26
OPTN-210ENST00000482140 RNASET2O00584 256 aaKnown RBP13.43□□□□□ -0.26
OPTN-210ENST00000482140 CPSF4O95639 269 aaKnown RBP13.43□□□□□ -0.26
OPTN-210ENST00000482140 NGFRP08138 427 aa13.43□□□□□ -0.26
OPTN-210ENST00000482140 PEPDP12955 493 aa13.43□□□□□ -0.26
OPTN-210ENST00000482140 PRF1P14222 555 aa13.43□□□□□ -0.26
OPTN-210ENST00000482140 POU3F2P20265 443 aaPredicted RBP13.43□□□□□ -0.26
OPTN-210ENST00000482140 TBXA2RP21731 343 aa13.43□□□□□ -0.26
OPTN-210ENST00000482140 BMP5P22003 454 aa13.43□□□□□ -0.26
OPTN-210ENST00000482140 MSX1P28360 303 aa13.43□□□□□ -0.26
OPTN-210ENST00000482140 EPHA3P29320 983 aa13.43□□□□□ -0.26
OPTN-210ENST00000482140 STARP49675 285 aa13.43□□□□□ -0.26
OPTN-210ENST00000482140 LHX2P50458 406 aa13.43□□□□□ -0.26
OPTN-210ENST00000482140 EXOSC6Q5RKV6 272 aaKnown RBP13.43□□□□□ -0.26
OPTN-210ENST00000482140 APOOLQ6UXV4 268 aa13.43□□□□□ -0.26
OPTN-210ENST00000482140 CHMP1BQ7LBR1 199 aa13.43□□□□□ -0.26
OPTN-210ENST00000482140 WDR75Q8IWA0 830 aaKnown RBP13.43□□□□□ -0.26
OPTN-210ENST00000482140 GATSQ8NAP1 163 aa13.43□□□□□ -0.26
OPTN-210ENST00000482140 ZNF527Q8NB42 609 aa13.43□□□□□ -0.26
OPTN-210ENST00000482140 OR4C3Q8NH37 302 aa13.43□□□□□ -0.26
OPTN-210ENST00000482140 ARL8AQ96BM9 186 aa13.43□□□□□ -0.26
OPTN-210ENST00000482140 TESCQ96BS2 214 aa13.43□□□□□ -0.26
OPTN-210ENST00000482140 C1GALT1C1Q96EU7 318 aa13.43□□□□□ -0.26
OPTN-210ENST00000482140 LRRC46Q96FV0 321 aa13.43□□□□□ -0.26
OPTN-210ENST00000482140 SLC35G5Q96KT7 338 aa13.43□□□□□ -0.26
OPTN-210ENST00000482140 TUBA1CQ9BQE3 449 aa13.43□□□□□ -0.26
OPTN-210ENST00000482140 PIGQQ9BRB3 760 aa13.43□□□□□ -0.26
OPTN-210ENST00000482140 ENKD1Q9H0I2 346 aa13.43□□□□□ -0.26
OPTN-210ENST00000482140 GPATCH2Q9NW75 528 aa13.43□□□□□ -0.26
OPTN-210ENST00000482140 FBXO34Q9NWN3 711 aa13.43□□□□□ -0.26
OPTN-210ENST00000482140 KIAA1549Q9HCM3 1950 aa13.43□□□□□ -0.26
OPTN-210ENST00000482140 CENPEQ02224 2701 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms