RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 TMOD2Q9NZR1 351 aa3□□□□□ -1.93
CBX3-207ENST00000481300 ZNF581Q9P0T4 197 aa3□□□□□ -1.93
CBX3-207ENST00000481300 CLIP2Q9UDT6 1046 aa3□□□□□ -1.93
CBX3-207ENST00000481300 HOOK1Q9UJC3 728 aaKnown RBP3□□□□□ -1.93
CBX3-207ENST00000481300 NAP1L2Q9ULW6 460 aaPredicted RBP3□□□□□ -1.93
CBX3-207ENST00000481300 RNF24Q9Y225 148 aa3□□□□□ -1.93
CBX3-207ENST00000481300 FKBP7Q9Y680 259 aa3□□□□□ -1.93
CBX3-207ENST00000481300 LRP5O75197 1615 aa3□□□□□ -1.93
CBX3-207ENST00000481300 NUP188Q5SRE5 1749 aa2.99□□□□□ -1.93
CBX3-207ENST00000481300 ZMYM6O95789 1325 aa2.99□□□□□ -1.93
CBX3-207ENST00000481300 FER1L5A0AVI2 2057 aa2.99□□□□□ -1.93
CBX3-207ENST00000481300 EP400Q96L91 3159 aa2.99□□□□□ -1.93
CBX3-207ENST00000481300 COL4A1P02462 1669 aa2.99□□□□□ -1.93
CBX3-207ENST00000481300 SCN7AQ01118 1682 aa2.99□□□□□ -1.93
CBX3-207ENST00000481300 ERICH2A1L162 156 aa2.99□□□□□ -1.93
CBX3-207ENST00000481300 TRABD2BA6NFA1 517 aa2.99□□□□□ -1.93
CBX3-207ENST00000481300 RANBP6O60518 1105 aaKnown RBP2.99□□□□□ -1.93
CBX3-207ENST00000481300 PDE5AO76074 875 aa2.99□□□□□ -1.93
CBX3-207ENST00000481300 OAS1P00973 400 aaKnown RBP2.99□□□□□ -1.93
CBX3-207ENST00000481300 FAM200BP0CF97 657 aa2.99□□□□□ -1.93
CBX3-207ENST00000481300 RALAP11233 206 aa2.99□□□□□ -1.93
CBX3-207ENST00000481300 GP9P14770 177 aa2.99□□□□□ -1.93
CBX3-207ENST00000481300 ETS1P14921 441 aa2.99□□□□□ -1.93
CBX3-207ENST00000481300 GAP43P17677 238 aa2.99□□□□□ -1.93
CBX3-207ENST00000481300 IL10P22301 178 aa2.99□□□□□ -1.93
CBX3-207ENST00000481300 AKT2P31751 481 aa2.99□□□□□ -1.93
CBX3-207ENST00000481300 SLC6A8P48029 635 aa2.99□□□□□ -1.93
CBX3-207ENST00000481300 ARHGDIAP52565 204 aa2.99□□□□□ -1.93
CBX3-207ENST00000481300 VCPP55072 806 aaKnown RBP2.99□□□□□ -1.93
CBX3-207ENST00000481300 RAG2P55895 527 aa2.99□□□□□ -1.93
CBX3-207ENST00000481300 SNX1Q13596 522 aa2.99□□□□□ -1.93
CBX3-207ENST00000481300 C15orf32Q32M92 178 aa2.99□□□□□ -1.93
CBX3-207ENST00000481300 C12orf60Q5U649 245 aa2.99□□□□□ -1.93
CBX3-207ENST00000481300 TATDN1Q6P1N9 297 aa2.99□□□□□ -1.93
CBX3-207ENST00000481300 FAM159AQ6UWV7 190 aa2.99□□□□□ -1.93
CBX3-207ENST00000481300 GOLGA7Q7Z5G4 137 aa2.99□□□□□ -1.93
CBX3-207ENST00000481300 TSEN54Q7Z6J9 526 aaKnown RBP2.99□□□□□ -1.93
CBX3-207ENST00000481300 SLC22A18ASQ8N1D0 253 aa2.99□□□□□ -1.93
CBX3-207ENST00000481300 ZNF619Q8N2I2 560 aa2.99□□□□□ -1.93
CBX3-207ENST00000481300 CENPSQ8N2Z9 138 aa2.99□□□□□ -1.93
CBX3-207ENST00000481300 SPEM1Q8N4L4 309 aa2.99□□□□□ -1.93
CBX3-207ENST00000481300 HDDC3Q8N4P3 179 aa2.99□□□□□ -1.93
CBX3-207ENST00000481300 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.99□□□□□ -1.93
CBX3-207ENST00000481300 NECAB1Q8N987 351 aa2.99□□□□□ -1.93
CBX3-207ENST00000481300 SUMF1Q8NBK3 374 aa2.99□□□□□ -1.93
CBX3-207ENST00000481300 OR6T1Q8NGN1 323 aa2.99□□□□□ -1.93
CBX3-207ENST00000481300 OR52J3Q8NH60 311 aa2.99□□□□□ -1.93
CBX3-207ENST00000481300 FLVCR1-AS1Q8TAF5 88 aa2.99□□□□□ -1.93
CBX3-207ENST00000481300 AGAP11Q8TF27 550 aa2.99□□□□□ -1.93
CBX3-207ENST00000481300 ESR2Q92731 530 aa2.99□□□□□ -1.93
CBX3-207ENST00000481300 LHX4Q969G2 390 aa2.99□□□□□ -1.93
CBX3-207ENST00000481300 DYNLL2Q96FJ2 89 aa2.99□□□□□ -1.93
CBX3-207ENST00000481300 TCEANC2Q96MN5 208 aa2.99□□□□□ -1.93
CBX3-207ENST00000481300 FOXN4Q96NZ1 517 aa2.99□□□□□ -1.93
CBX3-207ENST00000481300 FAM173AQ9BQD7 235 aa2.99□□□□□ -1.93
CBX3-207ENST00000481300 TTYH2Q9BSA4 534 aa2.99□□□□□ -1.93
CBX3-207ENST00000481300 NDUFAF3Q9BU61 184 aa2.99□□□□□ -1.93
CBX3-207ENST00000481300 APOOQ9BUR5 198 aa2.99□□□□□ -1.93
CBX3-207ENST00000481300 TDRD3Q9H7E2 651 aaKnown RBP2.99□□□□□ -1.93
CBX3-207ENST00000481300 ESM1Q9NQ30 184 aa2.99□□□□□ -1.93
CBX3-207ENST00000481300 SENP1Q9P0U3 644 aa2.99□□□□□ -1.93
CBX3-207ENST00000481300 RCOR3Q9P2K3 495 aaPredicted RBP2.99□□□□□ -1.93
CBX3-207ENST00000481300 SPASTQ9UBP0 616 aa2.99□□□□□ -1.93
CBX3-207ENST00000481300 ARFGEF2Q9Y6D5 1785 aa2.99□□□□□ -1.93
CBX3-207ENST00000481300 LY75O60449 1722 aa2.99□□□□□ -1.93
CBX3-207ENST00000481300 COL5A3P25940 1745 aaPredicted RBP2.99□□□□□ -1.93
CBX3-207ENST00000481300 BRWD3Q6RI45 1802 aa2.98□□□□□ -1.93
CBX3-207ENST00000481300 WDR19Q8NEZ3 1342 aa2.98□□□□□ -1.93
CBX3-207ENST00000481300 KLF18A0A0U1RQI7 1052 aa2.98□□□□□ -1.93
CBX3-207ENST00000481300 CLRN2A0PK11 232 aa2.98□□□□□ -1.93
CBX3-207ENST00000481300 SRRM5B3KS81 715 aa2.98□□□□□ -1.93
CBX3-207ENST00000481300 RASGRF2O14827 1237 aa2.98□□□□□ -1.93
CBX3-207ENST00000481300 PFKFB2O60825 505 aa2.98□□□□□ -1.93
CBX3-207ENST00000481300 KBTBD11O94819 623 aa2.98□□□□□ -1.93
CBX3-207ENST00000481300 ECDO95905 644 aaPredicted RBP2.98□□□□□ -1.93
CBX3-207ENST00000481300 MAPK3P27361 379 aaPredicted RBP2.98□□□□□ -1.93
CBX3-207ENST00000481300 PRDX6P30041 224 aa2.98□□□□□ -1.93
CBX3-207ENST00000481300 MAT2AP31153 395 aaKnown RBP2.98□□□□□ -1.93
CBX3-207ENST00000481300 SAA4P35542 130 aa2.98□□□□□ -1.93
CBX3-207ENST00000481300 SGSHP51688 502 aa2.98□□□□□ -1.93
CBX3-207ENST00000481300 ATXN3P54252 364 aaPredicted RBP2.98□□□□□ -1.93
CBX3-207ENST00000481300 HMGCS2P54868 508 aa2.98□□□□□ -1.93
CBX3-207ENST00000481300 SLC26A5P58743 744 aa2.98□□□□□ -1.93
CBX3-207ENST00000481300 TCP10Q12799 353 aa2.98□□□□□ -1.93
CBX3-207ENST00000481300 C17orf58Q2M2W7 97 aa2.98□□□□□ -1.93
CBX3-207ENST00000481300 PARP6Q2NL67 630 aa2.98□□□□□ -1.93
CBX3-207ENST00000481300 ZNF528Q3MIS6 628 aa2.98□□□□□ -1.93
CBX3-207ENST00000481300 TOR1AIP1Q5JTV8 583 aa2.98□□□□□ -1.93
CBX3-207ENST00000481300 FKBP1CQ5VVH2 108 aa2.98□□□□□ -1.93
CBX3-207ENST00000481300 FAM219BQ5XKK7 198 aa2.98□□□□□ -1.93
CBX3-207ENST00000481300 ZNF774Q6NX45 483 aa2.98□□□□□ -1.93
CBX3-207ENST00000481300 ATRAIDQ6UW56 229 aa2.98□□□□□ -1.93
CBX3-207ENST00000481300 TMEM26Q6ZUK4 368 aa2.98□□□□□ -1.93
CBX3-207ENST00000481300 P4HA3Q7Z4N8 544 aa2.98□□□□□ -1.93
CBX3-207ENST00000481300 ADGRD2Q7Z7M1 963 aa2.98□□□□□ -1.93
CBX3-207ENST00000481300 AMZ2Q86W34 360 aa2.98□□□□□ -1.93
CBX3-207ENST00000481300 ELMOD2Q8IZ81 293 aa2.98□□□□□ -1.93
CBX3-207ENST00000481300 FBXL16Q8N461 479 aa2.98□□□□□ -1.93
CBX3-207ENST00000481300 MRPL43Q8N983 215 aaKnown RBP2.98□□□□□ -1.93
CBX3-207ENST00000481300 RHOXF1Q8NHV9 184 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms