RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, human

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-212	ENST00000477520		A0A1B0GUH1	482 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	C9orf170	A2RU37	121 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	ASPDH	A6ND91	283 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	ACOD1	A6NK06	481 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	AGAP14	A8MT82	685 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	ISM1	B1AKI9	464 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	TISP43	B9A030	160 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	NPIPB9	F8W1W9	429 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520		I6L893	689 aa	Predicted RBP	4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	CLIC1	O00299	241 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	CACNB4	O00305	520 aa	Predicted RBP	4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	CTDSPL	O15194	276 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	CHST10	O43529	356 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	SMAD6	O43541	496 aa	Known RBP	4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	TGM5	O43548	720 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	PLOD3	O60568	738 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	TPST2	O60704	377 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	HPGDS	O60760	199 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	CDC123	O75794	336 aa	Predicted RBP	4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	AP2A2	O94973	939 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	CDRT1	O95170	752 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	STBD1	O95210	358 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	GADD45G	O95257	159 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	WISP3	O95389	354 aa	Predicted RBP	4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	F2	P00734	622 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	HLA-DPB1	P04440	258 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	LGALS2	P05162	132 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	GLA	P06280	429 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	LPL	P06858	475 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	ASGR1	P07306	291 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	CD63	P08962	238 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	SPARC	P09486	303 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	NR2F6	P10588	404 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	CD19	P15391	556 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	MGMT	P16455	207 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	ZNF37A	P17032	561 aa	Predicted RBP	4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	ERCC2	P18074	760 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	PRKACG	P22612	351 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	AZGP1	P25311	298 aa	Known RBP	4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	CERS1	P27544	350 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	PSMB4	P28070	264 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	ACADL	P28330	430 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	SDHA	P31040	664 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	GABRA5	P31644	462 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	GRK5	P34947	590 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	TGFBR1	P36897	503 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	LTBR	P36941	435 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	ETV5	P41161	510 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	ACTR1B	P42025	376 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	BDKRB1	P46663	353 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	ZFP36L2	P47974	494 aa	Known RBP	4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	RBP2	P50120	134 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	MECP2	P51608	486 aa	Known RBP	4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	SUOX	P51687	545 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	ARFIP1	P53367	373 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	BPIFB3	P59826	476 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	GABRE	P78334	506 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	KCNJ10	P78508	379 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	CDC42EP1	Q00587	391 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	BEX3	Q00994	111 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	ACSM1	Q08AH1	577 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	TPBG	Q13641	420 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	GTF2H3	Q13889	308 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	IL18	Q14116	193 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	CSHL1	Q14406	222 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	GPR176	Q14439	515 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	GRB7	Q14451	532 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	TRAM1	Q15629	374 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	SSX1	Q16384	188 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	NTRK2	Q16620	822 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	GSG1	Q2KHT4	349 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	ZNF699	Q32M78	642 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	SGO1	Q5FBB7	561 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	FBXO48	Q5FWF7	155 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	ZNF667	Q5HYK9	610 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	ELFN2	Q5R3F8	820 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	C6orf136	Q5SQH8	315 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	IDNK	Q5T6J7	187 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	OR6B2	Q6IFH4	312 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	CNIH2	Q6PI25	160 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	PRSS55	Q6UWB4	352 aa	Predicted RBP	4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	ENPP6	Q6UWR7	440 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	CXCL17	Q6UXB2	119 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	GSG1L	Q6UXU4	331 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	GCNT7	Q6ZNI0	430 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	GALNT5	Q7Z7M9	940 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	MRPL52	Q86TS9	123 aa	Known RBP	4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	ISCA2	Q86U28	154 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	TPRA1	Q86W33	373 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	CEP97	Q8IW35	865 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	FAM217A	Q8IXS0	508 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	FAM169B	Q8N8A8	192 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	GPR26	Q8NDV2	337 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	OR11H4	Q8NGC9	324 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	OR2T35	Q8NGX2	323 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	OR6X1	Q8NH79	312 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	THAP6	Q8TBB0	222 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	ST7L	Q8TDW4	575 aa		4.41	□□□□□ -1.7
PTCD3-212	ENST00000477520	SMAP2	Q8WU79	429 aa	Predicted RBP	4.41	□□□□□ -1.7

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