RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 RPS6KL1Q9Y6S9 549 aa3.42□□□□□ -1.86
UBR3-209ENST00000477461 F5P12259 2224 aa3.42□□□□□ -1.86
UBR3-209ENST00000477461 COL4A2P08572 1712 aa3.41□□□□□ -1.86
UBR3-209ENST00000477461 BRCA2P51587 3418 aa3.41□□□□□ -1.86
UBR3-209ENST00000477461 ENO4A6NNW6 628 aa3.41□□□□□ -1.86
UBR3-209ENST00000477461 AP3B1O00203 1094 aa3.41□□□□□ -1.86
UBR3-209ENST00000477461 RAD51CO43502 376 aa3.41□□□□□ -1.86
UBR3-209ENST00000477461 GLRA3O75311 464 aa3.41□□□□□ -1.86
UBR3-209ENST00000477461 ZMPSTE24O75844 475 aa3.41□□□□□ -1.86
UBR3-209ENST00000477461 KRT33AO76009 404 aa3.41□□□□□ -1.86
UBR3-209ENST00000477461 KLF8O95600 359 aaPredicted RBP3.41□□□□□ -1.86
UBR3-209ENST00000477461 POP4O95707 220 aaKnown RBP3.41□□□□□ -1.86
UBR3-209ENST00000477461 HLA-DQB2P05538 268 aa3.41□□□□□ -1.86
UBR3-209ENST00000477461 CSN3P07498 182 aa3.41□□□□□ -1.86
UBR3-209ENST00000477461 SERPINF2P08697 491 aa3.41□□□□□ -1.86
UBR3-209ENST00000477461 RHOXF2BP0C7M4 288 aa3.41□□□□□ -1.86
UBR3-209ENST00000477461 SMIM18P0DKX4 95 aa3.41□□□□□ -1.86
UBR3-209ENST00000477461 HLA-EP13747 358 aa3.41□□□□□ -1.86
UBR3-209ENST00000477461 ETS1P14921 441 aa3.41□□□□□ -1.86
UBR3-209ENST00000477461 ACHEP22303 614 aa3.41□□□□□ -1.86
UBR3-209ENST00000477461 PSMB4P28070 264 aa3.41□□□□□ -1.86
UBR3-209ENST00000477461 MC5RP33032 325 aa3.41□□□□□ -1.86
UBR3-209ENST00000477461 RPL22P35268 128 aaKnown RBP3.41□□□□□ -1.86
UBR3-209ENST00000477461 KRT20P35900 424 aa3.41□□□□□ -1.86
UBR3-209ENST00000477461 CD86P42081 329 aa3.41□□□□□ -1.86
UBR3-209ENST00000477461 MAPK12P53778 367 aa3.41□□□□□ -1.86
UBR3-209ENST00000477461 CLDN15P56746 228 aa3.41□□□□□ -1.86
UBR3-209ENST00000477461 KRTAP12-2P59991 146 aa3.41□□□□□ -1.86
UBR3-209ENST00000477461 MAXP61244 160 aa3.41□□□□□ -1.86
UBR3-209ENST00000477461 AP1S1P61966 158 aa3.41□□□□□ -1.86
UBR3-209ENST00000477461 POLR2LP62875 67 aaKnown RBP3.41□□□□□ -1.86
UBR3-209ENST00000477461 GUCY2DQ02846 1103 aa3.41□□□□□ -1.86
UBR3-209ENST00000477461 CAV1Q03135 178 aa3.41□□□□□ -1.86
UBR3-209ENST00000477461 BCL2L1Q07817 233 aa3.41□□□□□ -1.86
UBR3-209ENST00000477461 WASHC5Q12768 1159 aa3.41□□□□□ -1.86
UBR3-209ENST00000477461 PTK6Q13882 451 aa3.41□□□□□ -1.86
UBR3-209ENST00000477461 CYTH1Q15438 398 aa3.41□□□□□ -1.86
UBR3-209ENST00000477461 PARP6Q2NL67 630 aa3.41□□□□□ -1.86
UBR3-209ENST00000477461 HNRNPA1L2Q32P51 320 aaKnown RBP3.41□□□□□ -1.86
UBR3-209ENST00000477461 PHLDA2Q53GA4 152 aa3.41□□□□□ -1.86
UBR3-209ENST00000477461 CARD16Q5EG05 197 aa3.41□□□□□ -1.86
UBR3-209ENST00000477461 EOGTQ5NDL2 527 aa3.41□□□□□ -1.86
UBR3-209ENST00000477461 TTC27Q6P3X3 843 aa3.41□□□□□ -1.86
UBR3-209ENST00000477461 PPP1R21Q6ZMI0 780 aa3.41□□□□□ -1.86
UBR3-209ENST00000477461 NUP54Q7Z3B4 507 aa3.41□□□□□ -1.86
UBR3-209ENST00000477461 LINC00523Q86TU6 105 aa3.41□□□□□ -1.86
UBR3-209ENST00000477461 IFT20Q8IY31 132 aa3.41□□□□□ -1.86
UBR3-209ENST00000477461 ZNF567Q8N184 647 aa3.41□□□□□ -1.86
UBR3-209ENST00000477461 TEX26Q8N6G2 289 aa3.41□□□□□ -1.86
UBR3-209ENST00000477461 NOA1Q8NC60 698 aaKnown RBP3.41□□□□□ -1.86
UBR3-209ENST00000477461 IPMKQ8NFU5 416 aa3.41□□□□□ -1.86
UBR3-209ENST00000477461 OR11H4Q8NGC9 324 aa3.41□□□□□ -1.86
UBR3-209ENST00000477461 OR2AP1Q8NGE2 309 aa3.41□□□□□ -1.86
UBR3-209ENST00000477461 OR4C3Q8NH37 302 aa3.41□□□□□ -1.86
UBR3-209ENST00000477461 PDCD6IPQ8WUM4 868 aaKnown RBP3.41□□□□□ -1.86
UBR3-209ENST00000477461 SLCO2A1Q92959 643 aa3.41□□□□□ -1.86
UBR3-209ENST00000477461 ISG20Q96AZ6 181 aaKnown RBP3.41□□□□□ -1.86
UBR3-209ENST00000477461 RMDN1Q96DB5 314 aa3.41□□□□□ -1.86
UBR3-209ENST00000477461 SNF8Q96H20 258 aa3.41□□□□□ -1.86
UBR3-209ENST00000477461 PPP1R16AQ96I34 528 aa3.41□□□□□ -1.86
UBR3-209ENST00000477461 PSKH2Q96QS6 385 aa3.41□□□□□ -1.86
UBR3-209ENST00000477461 IL12RB2Q99665 862 aa3.41□□□□□ -1.86
UBR3-209ENST00000477461 CPNE1Q99829 537 aa3.41□□□□□ -1.86
UBR3-209ENST00000477461 RHOXF2Q9BQY4 288 aa3.41□□□□□ -1.86
UBR3-209ENST00000477461 ERP44Q9BS26 406 aa3.41□□□□□ -1.86
UBR3-209ENST00000477461 TM6SF2Q9BZW4 377 aa3.41□□□□□ -1.86
UBR3-209ENST00000477461 OR2B2Q9GZK3 357 aa3.41□□□□□ -1.86
UBR3-209ENST00000477461 SLC25A51Q9H1U9 297 aa3.41□□□□□ -1.86
UBR3-209ENST00000477461 OR10A4Q9H209 315 aa3.41□□□□□ -1.86
UBR3-209ENST00000477461 GBA3Q9H227 469 aa3.41□□□□□ -1.86
UBR3-209ENST00000477461 DPH5Q9H2P9 285 aa3.41□□□□□ -1.86
UBR3-209ENST00000477461 ZDHHC6Q9H6R6 413 aa3.41□□□□□ -1.86
UBR3-209ENST00000477461 ATP13A3Q9H7F0 1226 aa3.41□□□□□ -1.86
UBR3-209ENST00000477461 Q9H8V8 135 aa3.41□□□□□ -1.86
UBR3-209ENST00000477461 LRRC40Q9H9A6 602 aa3.41□□□□□ -1.86
UBR3-209ENST00000477461 PDFQ9HBH1 243 aa3.41□□□□□ -1.86
UBR3-209ENST00000477461 CDH20Q9HBT6 801 aa3.41□□□□□ -1.86
UBR3-209ENST00000477461 DYRK4Q9NR20 520 aa3.41□□□□□ -1.86
UBR3-209ENST00000477461 FAM114A2Q9NRY5 505 aa3.41□□□□□ -1.86
UBR3-209ENST00000477461 THAP10Q9P2Z0 257 aaPredicted RBP3.41□□□□□ -1.86
UBR3-209ENST00000477461 LHX3Q9UBR4 397 aa3.41□□□□□ -1.86
UBR3-209ENST00000477461 MTRF1LQ9UGC7 380 aaKnown RBP3.41□□□□□ -1.86
UBR3-209ENST00000477461 FAM153AQ9UHL3 310 aa3.41□□□□□ -1.86
UBR3-209ENST00000477461 ANAPC5Q9UJX4 755 aa3.41□□□□□ -1.86
UBR3-209ENST00000477461 HS3ST2Q9Y278 367 aa3.41□□□□□ -1.86
UBR3-209ENST00000477461 OR51B4Q9Y5P0 310 aa3.41□□□□□ -1.86
UBR3-209ENST00000477461 TNRC18O15417 2968 aaPredicted RBP3.41□□□□□ -1.86
UBR3-209ENST00000477461 A0A1W2PQ67 120 aa3.4□□□□□ -1.87
UBR3-209ENST00000477461 K7EQS6 105 aa3.4□□□□□ -1.87
UBR3-209ENST00000477461 K7ERQ8 282 aa3.4□□□□□ -1.87
UBR3-209ENST00000477461 KPNA3O00505 521 aaPredicted RBP3.4□□□□□ -1.87
UBR3-209ENST00000477461 DNALI1O14645 258 aaPredicted RBP3.4□□□□□ -1.87
UBR3-209ENST00000477461 ALOX15BO15296 676 aa3.4□□□□□ -1.87
UBR3-209ENST00000477461 ERLIN1O75477 346 aa3.4□□□□□ -1.87
UBR3-209ENST00000477461 CDK2AP2O75956 126 aa3.4□□□□□ -1.87
UBR3-209ENST00000477461 RECQL5O94762 991 aaPredicted RBP3.4□□□□□ -1.87
UBR3-209ENST00000477461 IL1BP01584 269 aa3.4□□□□□ -1.87
UBR3-209ENST00000477461 UGT2B4P06133 528 aa3.4□□□□□ -1.87
UBR3-209ENST00000477461 APRTP07741 180 aa3.4□□□□□ -1.87
UBR3-209ENST00000477461 ZSCAN5DPP0CG00 497 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms