RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 KANK1Q14678 1352 aa2.85□□□□□ -1.95
CD46-213ENST00000471987 PLEKHG2Q9H7P9 1386 aa2.85□□□□□ -1.95
CD46-213ENST00000471987 NACAE9PAV3 2078 aa2.84□□□□□ -1.95
CD46-213ENST00000471987 MFSD2BA6NFX1 497 aa2.84□□□□□ -1.95
CD46-213ENST00000471987 NCF1BA6NI72 391 aaPredicted RBP2.84□□□□□ -1.95
CD46-213ENST00000471987 NCF1CA8MVU1 366 aaPredicted RBP2.84□□□□□ -1.95
CD46-213ENST00000471987 HSBP1L1C9JCN9 74 aa2.84□□□□□ -1.95
CD46-213ENST00000471987 G3V3Y1 287 aa2.84□□□□□ -1.95
CD46-213ENST00000471987 H0YCG3 227 aa2.84□□□□□ -1.95
CD46-213ENST00000471987 SLC30A4O14863 429 aa2.84□□□□□ -1.95
CD46-213ENST00000471987 ANGPT2O15123 496 aa2.84□□□□□ -1.95
CD46-213ENST00000471987 ST8SIA3O43173 380 aa2.84□□□□□ -1.95
CD46-213ENST00000471987 LATO43561 262 aa2.84□□□□□ -1.95
CD46-213ENST00000471987 CACNG3O60359 315 aa2.84□□□□□ -1.95
CD46-213ENST00000471987 NIPSNAP2O75323 286 aa2.84□□□□□ -1.95
CD46-213ENST00000471987 CA11O75493 328 aa2.84□□□□□ -1.95
CD46-213ENST00000471987 BCAS2O75934 225 aaPredicted RBP2.84□□□□□ -1.95
CD46-213ENST00000471987 FLOT1O75955 427 aa2.84□□□□□ -1.95
CD46-213ENST00000471987 EPOP01588 193 aa2.84□□□□□ -1.95
CD46-213ENST00000471987 CT45A10P0DMU9 189 aa2.84□□□□□ -1.95
CD46-213ENST00000471987 GLRA2P23416 452 aa2.84□□□□□ -1.95
CD46-213ENST00000471987 MAGEA4P43358 317 aa2.84□□□□□ -1.95
CD46-213ENST00000471987 DHPSP49366 369 aaPredicted RBP2.84□□□□□ -1.95
CD46-213ENST00000471987 MNAT1P51948 309 aa2.84□□□□□ -1.95
CD46-213ENST00000471987 DIO3P55073 304 aa2.84□□□□□ -1.95
CD46-213ENST00000471987 DSTNP60981 165 aa2.84□□□□□ -1.95
CD46-213ENST00000471987 ASIC1P78348 528 aa2.84□□□□□ -1.95
CD46-213ENST00000471987 HSPA14Q0VDF9 509 aa2.84□□□□□ -1.95
CD46-213ENST00000471987 COTL1Q14019 142 aa2.84□□□□□ -1.95
CD46-213ENST00000471987 BTG3Q14201 252 aaPredicted RBP2.84□□□□□ -1.95
CD46-213ENST00000471987 GNA13Q14344 377 aa2.84□□□□□ -1.95
CD46-213ENST00000471987 WDR43Q15061 677 aaKnown RBP eCLIP2.84□□□□□ -1.95
CD46-213ENST00000471987 KRT31Q15323 416 aa2.84□□□□□ -1.95
CD46-213ENST00000471987 MAPRE2Q15555 327 aa2.84□□□□□ -1.95
CD46-213ENST00000471987 TFDP3Q5H9I0 405 aa2.84□□□□□ -1.95
CD46-213ENST00000471987 CLEC2AQ6UVW9 174 aa2.84□□□□□ -1.95
CD46-213ENST00000471987 MFSD7Q6UXD7 560 aa2.84□□□□□ -1.95
CD46-213ENST00000471987 STOX1Q6ZVD7 989 aa2.84□□□□□ -1.95
CD46-213ENST00000471987 TAF8Q7Z7C8 310 aa2.84□□□□□ -1.95
CD46-213ENST00000471987 LUZP1Q86V48 1076 aa2.84□□□□□ -1.95
CD46-213ENST00000471987 TUSC5Q8IXB3 177 aa2.84□□□□□ -1.95
CD46-213ENST00000471987 RNF10Q8N5U6 811 aaKnown RBP2.84□□□□□ -1.95
CD46-213ENST00000471987 LINC01555Q8NAE3 123 aa2.84□□□□□ -1.95
CD46-213ENST00000471987 UXS1Q8NBZ7 420 aa2.84□□□□□ -1.95
CD46-213ENST00000471987 FIBINQ8TAL6 211 aa2.84□□□□□ -1.95
CD46-213ENST00000471987 SIKE1Q9BRV8 207 aa2.84□□□□□ -1.95
CD46-213ENST00000471987 THUMPD2Q9BTF0 503 aaKnown RBP2.84□□□□□ -1.95
CD46-213ENST00000471987 CCSER1Q9C0I3 900 aa2.84□□□□□ -1.95
CD46-213ENST00000471987 CARD9Q9H257 536 aa2.84□□□□□ -1.95
CD46-213ENST00000471987 HAUS4Q9H6D7 363 aa2.84□□□□□ -1.95
CD46-213ENST00000471987 TECRQ9NZ01 308 aaKnown RBP2.84□□□□□ -1.95
CD46-213ENST00000471987 LIPT1Q9Y234 373 aa2.84□□□□□ -1.95
CD46-213ENST00000471987 SBNO1A3KN83 1393 aa2.84□□□□□ -1.96
CD46-213ENST00000471987 LRRD1A4D1F6 860 aa2.83□□□□□ -1.96
CD46-213ENST00000471987 SLC9B1P1A6NJY1 282 aa2.83□□□□□ -1.96
CD46-213ENST00000471987 ZNF879B4DU55 563 aa2.83□□□□□ -1.96
CD46-213ENST00000471987 E9PBE3 544 aa2.83□□□□□ -1.96
CD46-213ENST00000471987 TRDMT1O14717 391 aaKnown RBP2.83□□□□□ -1.96
CD46-213ENST00000471987 CYTH3O43739 400 aa2.83□□□□□ -1.96
CD46-213ENST00000471987 SPAG6O75602 509 aa2.83□□□□□ -1.96
CD46-213ENST00000471987 CRTAPO75718 401 aaPredicted RBP2.83□□□□□ -1.96
CD46-213ENST00000471987 KRT14P02533 472 aa2.83□□□□□ -1.96
CD46-213ENST00000471987 TPBGLP0DKB5 382 aa2.83□□□□□ -1.96
CD46-213ENST00000471987 MBL2P11226 248 aaPredicted RBP2.83□□□□□ -1.96
CD46-213ENST00000471987 PTPN4P29074 926 aa2.83□□□□□ -1.96
CD46-213ENST00000471987 BMI1P35226 326 aa2.83□□□□□ -1.96
CD46-213ENST00000471987 RFC2P35250 354 aa2.83□□□□□ -1.96
CD46-213ENST00000471987 TRIM23P36406 574 aa2.83□□□□□ -1.96
CD46-213ENST00000471987 CARD18P57730 90 aa2.83□□□□□ -1.96
CD46-213ENST00000471987 SSTP61278 116 aa2.83□□□□□ -1.96
CD46-213ENST00000471987 UBE2IP63279 158 aaKnown RBP2.83□□□□□ -1.96
CD46-213ENST00000471987 CHIT1Q13231 466 aa2.83□□□□□ -1.96
CD46-213ENST00000471987 STK38Q15208 465 aa2.83□□□□□ -1.96
CD46-213ENST00000471987 SNCBQ16143 134 aa2.83□□□□□ -1.96
CD46-213ENST00000471987 IL17AQ16552 155 aa2.83□□□□□ -1.96
CD46-213ENST00000471987 KYAT1Q16773 422 aa2.83□□□□□ -1.96
CD46-213ENST00000471987 TYSND1Q2T9J0 566 aa2.83□□□□□ -1.96
CD46-213ENST00000471987 GLRA4Q5JXX5 417 aa2.83□□□□□ -1.96
CD46-213ENST00000471987 SEL1L2Q5TEA6 688 aa2.83□□□□□ -1.96
CD46-213ENST00000471987 ERICH5Q6P6B1 374 aa2.83□□□□□ -1.96
CD46-213ENST00000471987 PODNL1Q6PEZ8 512 aa2.83□□□□□ -1.96
CD46-213ENST00000471987 TFAP2EQ6VUC0 442 aa2.83□□□□□ -1.96
CD46-213ENST00000471987 GRAMD2AQ8IUY3 354 aa2.83□□□□□ -1.96
CD46-213ENST00000471987 PSTKQ8IV42 348 aaKnown RBP2.83□□□□□ -1.96
CD46-213ENST00000471987 UNC5CLQ8IV45 518 aa2.83□□□□□ -1.96
CD46-213ENST00000471987 ERI1Q8IV48 349 aaKnown RBP2.83□□□□□ -1.96
CD46-213ENST00000471987 GPR65Q8IYL9 337 aa2.83□□□□□ -1.96
CD46-213ENST00000471987 BBS5Q8N3I7 341 aa2.83□□□□□ -1.96
CD46-213ENST00000471987 CADM2Q8N3J6 435 aa2.83□□□□□ -1.96
CD46-213ENST00000471987 ZNF565Q8N9K5 539 aa2.83□□□□□ -1.96
CD46-213ENST00000471987 DNAAF3Q8N9W5 541 aa2.83□□□□□ -1.96
CD46-213ENST00000471987 DDI1Q8WTU0 396 aa2.83□□□□□ -1.96
CD46-213ENST00000471987 PIBF1Q8WXW3 757 aa2.83□□□□□ -1.96
CD46-213ENST00000471987 RAB7BQ96AH8 199 aa2.83□□□□□ -1.96
CD46-213ENST00000471987 EFHD2Q96C19 240 aaPredicted RBP2.83□□□□□ -1.96
CD46-213ENST00000471987 LRRC39Q96DD0 335 aa2.83□□□□□ -1.96
CD46-213ENST00000471987 FAM111AQ96PZ2 611 aa2.83□□□□□ -1.96
CD46-213ENST00000471987 FAM173AQ9BQD7 235 aa2.83□□□□□ -1.96
CD46-213ENST00000471987 CCDC77Q9BR77 488 aa2.83□□□□□ -1.96
CD46-213ENST00000471987 CRNKL1Q9BZJ0 848 aaKnown RBP2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms