RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 PABPC4LP0CB38 370 aaKnown RBP8.08□□□□□ -1.12
SYNGAP1-205ENST00000470232 TCN1P20061 433 aaPredicted RBP8.08□□□□□ -1.12
SYNGAP1-205ENST00000470232 TMED10P49755 219 aaKnown RBP8.08□□□□□ -1.12
SYNGAP1-205ENST00000470232 IL2P60568 153 aa8.08□□□□□ -1.12
SYNGAP1-205ENST00000470232 RPS4XP62701 263 aaKnown RBP8.08□□□□□ -1.12
SYNGAP1-205ENST00000470232 PCDH1Q08174 1060 aa8.08□□□□□ -1.12
SYNGAP1-205ENST00000470232 GALNT1Q10472 559 aaPredicted RBP8.08□□□□□ -1.12
SYNGAP1-205ENST00000470232 KRTAP24-1Q3LI83 254 aa8.08□□□□□ -1.12
SYNGAP1-205ENST00000470232 EIPR1Q53HC9 387 aa8.08□□□□□ -1.12
SYNGAP1-205ENST00000470232 BEX5Q5H9J7 111 aa8.08□□□□□ -1.12
SYNGAP1-205ENST00000470232 SAMD4BQ5PRF9 694 aaKnown RBP8.08□□□□□ -1.12
SYNGAP1-205ENST00000470232 ZNF678Q5SXM1 525 aa8.08□□□□□ -1.12
SYNGAP1-205ENST00000470232 OR2A2Q6IF42 318 aa8.08□□□□□ -1.12
SYNGAP1-205ENST00000470232 LYPD8Q6UX82 237 aa8.08□□□□□ -1.12
SYNGAP1-205ENST00000470232 TMIGD1Q6UXZ0 262 aa8.08□□□□□ -1.12
SYNGAP1-205ENST00000470232 CHMP1BQ7LBR1 199 aa8.08□□□□□ -1.12
SYNGAP1-205ENST00000470232 P4HA3Q7Z4N8 544 aa8.08□□□□□ -1.12
SYNGAP1-205ENST00000470232 TMPRSS11BQ86T26 416 aa8.08□□□□□ -1.12
SYNGAP1-205ENST00000470232 THOC6Q86W42 341 aaKnown RBP8.08□□□□□ -1.12
SYNGAP1-205ENST00000470232 GRAMD2AQ8IUY3 354 aa8.08□□□□□ -1.12
SYNGAP1-205ENST00000470232 LILRA2Q8N149 483 aa8.08□□□□□ -1.12
SYNGAP1-205ENST00000470232 ZNF611Q8N823 705 aa8.08□□□□□ -1.12
SYNGAP1-205ENST00000470232 PTGR2Q8N8N7 351 aaPredicted RBP8.08□□□□□ -1.12
SYNGAP1-205ENST00000470232 FAM156AQ8NDB6 213 aa8.08□□□□□ -1.12
SYNGAP1-205ENST00000470232 SRFBP1Q8NEF9 429 aaKnown RBP8.08□□□□□ -1.12
SYNGAP1-205ENST00000470232 OR2L5Q8NG80 312 aa8.08□□□□□ -1.12
SYNGAP1-205ENST00000470232 ANKRD49Q8WVL7 239 aa8.08□□□□□ -1.12
SYNGAP1-205ENST00000470232 ASB9Q96DX5 294 aa8.08□□□□□ -1.12
SYNGAP1-205ENST00000470232 L3HYPDHQ96EM0 354 aa8.08□□□□□ -1.12
SYNGAP1-205ENST00000470232 TUBA1CQ9BQE3 449 aa8.08□□□□□ -1.12
SYNGAP1-205ENST00000470232 ANGPTL4Q9BY76 406 aa8.08□□□□□ -1.12
SYNGAP1-205ENST00000470232 PITHD1Q9GZP4 211 aaPredicted RBP8.08□□□□□ -1.12
SYNGAP1-205ENST00000470232 REXO4Q9GZR2 422 aaKnown RBP8.08□□□□□ -1.12
SYNGAP1-205ENST00000470232 ZNF696Q9H7X3 374 aa8.08□□□□□ -1.12
SYNGAP1-205ENST00000470232 LYRM4Q9HD34 91 aa8.08□□□□□ -1.12
SYNGAP1-205ENST00000470232 TNFRSF12AQ9NP84 129 aa8.08□□□□□ -1.12
SYNGAP1-205ENST00000470232 MAPRE3Q9UPY8 281 aa8.08□□□□□ -1.12
SYNGAP1-205ENST00000470232 AP4S1Q9Y587 144 aa8.08□□□□□ -1.12
SYNGAP1-205ENST00000470232 COMMD3-BMI1R4GMX3 469 aa8.08□□□□□ -1.12
SYNGAP1-205ENST00000470232 USF3Q68DE3 2245 aa8.07□□□□□ -1.12
SYNGAP1-205ENST00000470232 A0A1W2PNV4 684 aa8.07□□□□□ -1.12
SYNGAP1-205ENST00000470232 OR6C76A6NM76 312 aa8.07□□□□□ -1.12
SYNGAP1-205ENST00000470232 BBIP1A8MTZ0 92 aa8.07□□□□□ -1.12
SYNGAP1-205ENST00000470232 CDC7O00311 574 aa8.07□□□□□ -1.12
SYNGAP1-205ENST00000470232 NR5A2O00482 541 aa8.07□□□□□ -1.12
SYNGAP1-205ENST00000470232 FBP2O00757 339 aa8.07□□□□□ -1.12
SYNGAP1-205ENST00000470232 LDB3O75112 727 aa8.07□□□□□ -1.12
SYNGAP1-205ENST00000470232 CRCPO75575 148 aa8.07□□□□□ -1.12
SYNGAP1-205ENST00000470232 CLEC3AO75596 197 aa8.07□□□□□ -1.12
SYNGAP1-205ENST00000470232 LRATO95237 230 aa8.07□□□□□ -1.12
SYNGAP1-205ENST00000470232 TNFAIP8O95379 198 aa8.07□□□□□ -1.12
SYNGAP1-205ENST00000470232 WISP3O95389 354 aaPredicted RBP8.07□□□□□ -1.12
SYNGAP1-205ENST00000470232 GUCA1CO95843 209 aa8.07□□□□□ -1.12
SYNGAP1-205ENST00000470232 C1GALT1C1LP0DN25 315 aa8.07□□□□□ -1.12
SYNGAP1-205ENST00000470232 CD1DP15813 335 aa8.07□□□□□ -1.12
SYNGAP1-205ENST00000470232 PPP3CBP16298 524 aa8.07□□□□□ -1.12
SYNGAP1-205ENST00000470232 TSPAN8P19075 237 aa8.07□□□□□ -1.12
SYNGAP1-205ENST00000470232 UGT2B10P36537 528 aa8.07□□□□□ -1.12
SYNGAP1-205ENST00000470232 RPL5P46777 297 aaKnown RBP8.07□□□□□ -1.12
SYNGAP1-205ENST00000470232 STT3AP46977 705 aa8.07□□□□□ -1.12
SYNGAP1-205ENST00000470232 CDKN2DP55273 166 aa8.07□□□□□ -1.12
SYNGAP1-205ENST00000470232 NRG3P56975 720 aa8.07□□□□□ -1.12
SYNGAP1-205ENST00000470232 SRYQ05066 204 aa8.07□□□□□ -1.12
SYNGAP1-205ENST00000470232 TRIM25Q14258 630 aaKnown RBP8.07□□□□□ -1.12
SYNGAP1-205ENST00000470232 RPS6KA2Q15349 733 aa8.07□□□□□ -1.12
SYNGAP1-205ENST00000470232 ADRM1Q16186 407 aa8.07□□□□□ -1.12
SYNGAP1-205ENST00000470232 PPP1R3AQ16821 1122 aa8.07□□□□□ -1.12
SYNGAP1-205ENST00000470232 C6orf52Q5T4I8 152 aa8.07□□□□□ -1.12
SYNGAP1-205ENST00000470232 IL23RQ5VWK5 629 aa8.07□□□□□ -1.12
SYNGAP1-205ENST00000470232 HLA-DQA1Q5Y7H0 255 aa8.07□□□□□ -1.12
SYNGAP1-205ENST00000470232 CLEC6AQ6EIG7 209 aa8.07□□□□□ -1.12
SYNGAP1-205ENST00000470232 ZNF704Q6ZNC4 412 aaPredicted RBP8.07□□□□□ -1.12
SYNGAP1-205ENST00000470232 SATL1Q86VE3 508 aa8.07□□□□□ -1.12
SYNGAP1-205ENST00000470232 C9orf40Q8IXQ3 194 aa8.07□□□□□ -1.12
SYNGAP1-205ENST00000470232 GCNT2Q8N0V5 402 aa8.07□□□□□ -1.12
SYNGAP1-205ENST00000470232 CNEP1R1Q8N9A8 125 aa8.07□□□□□ -1.12
SYNGAP1-205ENST00000470232 SNX31Q8N9S9 440 aa8.07□□□□□ -1.12
SYNGAP1-205ENST00000470232 PCYOX1LQ8NBM8 494 aa8.07□□□□□ -1.12
SYNGAP1-205ENST00000470232 FAM83FQ8NEG4 500 aaPredicted RBP8.07□□□□□ -1.12
SYNGAP1-205ENST00000470232 OR1J4Q8NGS1 313 aa8.07□□□□□ -1.12
SYNGAP1-205ENST00000470232 IGFBPL1Q8WX77 278 aa8.07□□□□□ -1.12
SYNGAP1-205ENST00000470232 ATP6V1E2Q96A05 226 aa8.07□□□□□ -1.12
SYNGAP1-205ENST00000470232 LINGO1Q96FE5 620 aa8.07□□□□□ -1.12
SYNGAP1-205ENST00000470232 ZC3HAV1LQ96H79 300 aaKnown RBP8.07□□□□□ -1.12
SYNGAP1-205ENST00000470232 TMEM41AQ96HV5 264 aa8.07□□□□□ -1.12
SYNGAP1-205ENST00000470232 GAL3ST4Q96RP7 486 aa8.07□□□□□ -1.12
SYNGAP1-205ENST00000470232 CSF3RQ99062 836 aa8.07□□□□□ -1.12
SYNGAP1-205ENST00000470232 AICDAQ9GZX7 198 aa8.07□□□□□ -1.12
SYNGAP1-205ENST00000470232 POPDC3Q9HBV1 291 aa8.07□□□□□ -1.12
SYNGAP1-205ENST00000470232 PRM3Q9NNZ6 103 aa8.07□□□□□ -1.12
SYNGAP1-205ENST00000470232 FANCFQ9NPI8 374 aa8.07□□□□□ -1.12
SYNGAP1-205ENST00000470232 TMEM160Q9NX00 188 aa8.07□□□□□ -1.12
SYNGAP1-205ENST00000470232 UBAP1Q9NZ09 502 aa8.07□□□□□ -1.12
SYNGAP1-205ENST00000470232 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.06□□□□□ -1.12
SYNGAP1-205ENST00000470232 C2orf92A0A1B0GVN3 265 aa8.06□□□□□ -1.12
SYNGAP1-205ENST00000470232 TCRBV3S1A0A5B6 114 aa8.06□□□□□ -1.12
SYNGAP1-205ENST00000470232 CCDC160A6NGH7 325 aa8.06□□□□□ -1.12
SYNGAP1-205ENST00000470232 LRRC14BA6NHZ5 514 aa8.06□□□□□ -1.12
SYNGAP1-205ENST00000470232 SUPT3HB4E1H0 165 aa8.06□□□□□ -1.12
SYNGAP1-205ENST00000470232 H0YJX3 145 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms