RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 SLC46A1Q96NT5 459 aa16.78■□□□□ 0.28
SMC4-211ENST00000469858 SEMA4GQ9NTN9 838 aa16.78■□□□□ 0.28
SMC4-211ENST00000469858 NDRG4Q9ULP0 352 aaKnown RBP16.78■□□□□ 0.28
SMC4-211ENST00000469858 KIF26BQ2KJY2 2108 aa16.78■□□□□ 0.28
SMC4-211ENST00000469858 CDHR4A6H8M9 788 aa16.78■□□□□ 0.28
SMC4-211ENST00000469858 TTC36A6NLP5 189 aa16.78■□□□□ 0.28
SMC4-211ENST00000469858 CDX4O14627 284 aaPredicted RBP16.78■□□□□ 0.28
SMC4-211ENST00000469858 CCL4P13236 92 aa16.78■□□□□ 0.28
SMC4-211ENST00000469858 IFNA8P32881 189 aa16.78■□□□□ 0.28
SMC4-211ENST00000469858 ISL1P61371 349 aa16.78■□□□□ 0.28
SMC4-211ENST00000469858 Q6ZPB1 254 aaPredicted RBP16.78■□□□□ 0.28
SMC4-211ENST00000469858 BPHLQ86WA6 291 aaPredicted RBP16.78■□□□□ 0.28
SMC4-211ENST00000469858 BMPERQ8N8U9 685 aa16.78■□□□□ 0.28
SMC4-211ENST00000469858 NR4A3Q92570 626 aa16.78■□□□□ 0.28
SMC4-211ENST00000469858 FKBP10Q96AY3 582 aa16.78■□□□□ 0.28
SMC4-211ENST00000469858 G6PC3Q9BUM1 346 aa16.78■□□□□ 0.28
SMC4-211ENST00000469858 NUDT9Q9BW91 350 aa16.78■□□□□ 0.28
SMC4-211ENST00000469858 ADNPQ9H2P0 1102 aa16.78■□□□□ 0.28
SMC4-211ENST00000469858 C11orf16Q9NQ32 467 aa16.78■□□□□ 0.28
SMC4-211ENST00000469858 C14orf105Q9NVL8 296 aa16.78■□□□□ 0.28
SMC4-211ENST00000469858 COL27A1Q8IZC6 1860 aaPredicted RBP16.78■□□□□ 0.28
SMC4-211ENST00000469858 BCAS1O75363 584 aaPredicted RBP16.77■□□□□ 0.28
SMC4-211ENST00000469858 ADAP00813 363 aa16.77■□□□□ 0.28
SMC4-211ENST00000469858 GKN3PP0CG01 181 aa16.77■□□□□ 0.28
SMC4-211ENST00000469858 RYKP34925 604 aa16.77■□□□□ 0.28
SMC4-211ENST00000469858 ZNF136P52737 540 aa16.77■□□□□ 0.28
SMC4-211ENST00000469858 PGBD2Q6P3X8 592 aa16.77■□□□□ 0.28
SMC4-211ENST00000469858 KLHL17Q6TDP4 642 aa16.77■□□□□ 0.28
SMC4-211ENST00000469858 RANBP3LQ86VV4 465 aaPredicted RBP16.77■□□□□ 0.28
SMC4-211ENST00000469858 ART5Q96L15 291 aa16.77■□□□□ 0.28
SMC4-211ENST00000469858 GAL3ST4Q96RP7 486 aa16.77■□□□□ 0.28
SMC4-211ENST00000469858 LMF1Q96S06 567 aa16.77■□□□□ 0.28
SMC4-211ENST00000469858 PITX2Q99697 317 aa16.77■□□□□ 0.28
SMC4-211ENST00000469858 APOL4Q9BPW4 351 aa16.77■□□□□ 0.28
SMC4-211ENST00000469858 ARMC7Q9H6L4 198 aa16.77■□□□□ 0.28
SMC4-211ENST00000469858 RXFP3Q9NSD7 469 aa16.77■□□□□ 0.28
SMC4-211ENST00000469858 MGAT4BQ9UQ53 548 aa16.77■□□□□ 0.28
SMC4-211ENST00000469858 CFL2Q9Y281 166 aa16.77■□□□□ 0.28
SMC4-211ENST00000469858 IDSB3KWA1 339 aa16.77■□□□□ 0.27
SMC4-211ENST00000469858 CPNE3O75131 537 aaKnown RBP16.77■□□□□ 0.27
SMC4-211ENST00000469858 CYP7B1O75881 506 aa16.77■□□□□ 0.27
SMC4-211ENST00000469858 HEXBP07686 556 aa16.77■□□□□ 0.27
SMC4-211ENST00000469858 GUSBP08236 651 aa16.77■□□□□ 0.27
SMC4-211ENST00000469858 PRG2P13727 222 aa16.77■□□□□ 0.27
SMC4-211ENST00000469858 CD59P13987 128 aa16.77■□□□□ 0.27
SMC4-211ENST00000469858 RPS6KA3P51812 740 aa16.77■□□□□ 0.27
SMC4-211ENST00000469858 UGT2B15P54855 530 aa16.77■□□□□ 0.27
SMC4-211ENST00000469858 ST3GAL3Q11203 375 aa16.77■□□□□ 0.27
SMC4-211ENST00000469858 TRAM2Q15035 370 aa16.77■□□□□ 0.27
SMC4-211ENST00000469858 AP1ARQ63HQ0 302 aa16.77■□□□□ 0.27
SMC4-211ENST00000469858 OVCH1Q7RTY7 1134 aa16.77■□□□□ 0.27
SMC4-211ENST00000469858 ZSCAN1Q8NBB4 408 aa16.77■□□□□ 0.27
SMC4-211ENST00000469858 OR4K5Q8NGD3 323 aa16.77■□□□□ 0.27
SMC4-211ENST00000469858 NXF5Q9H1B4 397 aaKnown RBP16.77■□□□□ 0.27
SMC4-211ENST00000469858 COPS7AQ9UBW8 275 aa16.77■□□□□ 0.27
SMC4-211ENST00000469858 IGHV3-20A0A0C4DH32 117 aa16.76■□□□□ 0.27
SMC4-211ENST00000469858 PPICP45877 212 aa16.76■□□□□ 0.27
SMC4-211ENST00000469858 LSM11P83369 360 aaKnown RBP eCLIP16.76■□□□□ 0.277e-97■■■■■ 245.7
SMC4-211ENST00000469858 TARDBPQ13148 414 aaKnown RBP eCLIP16.76■□□□□ 0.27
SMC4-211ENST00000469858 LCN10Q6JVE6 187 aa16.76■□□□□ 0.27
SMC4-211ENST00000469858 NAXDQ8IW45 347 aa16.76■□□□□ 0.27
SMC4-211ENST00000469858 PARP8Q8N3A8 854 aa16.76■□□□□ 0.27
SMC4-211ENST00000469858 MORN4Q8NDC4 146 aa16.76■□□□□ 0.27
SMC4-211ENST00000469858 CNIH3Q8TBE1 160 aa16.76■□□□□ 0.27
SMC4-211ENST00000469858 SLC38A4Q969I6 547 aa16.76■□□□□ 0.27
SMC4-211ENST00000469858 EFHD2Q96C19 240 aaPredicted RBP16.76■□□□□ 0.27
SMC4-211ENST00000469858 HRASLS5Q96KN8 279 aa16.76■□□□□ 0.27
SMC4-211ENST00000469858 PCDHGA10Q9Y5H3 936 aa16.76■□□□□ 0.27
SMC4-211ENST00000469858 ZNF318Q5VUA4 2279 aa16.76■□□□□ 0.27
SMC4-211ENST00000469858 E9PQ18 207 aa16.75■□□□□ 0.27
SMC4-211ENST00000469858 MEN1O00255 615 aa16.75■□□□□ 0.27
SMC4-211ENST00000469858 ZNF806P0C7X5 589 aa16.75■□□□□ 0.27
SMC4-211ENST00000469858 ZNF28P17035 718 aa16.75■□□□□ 0.27
SMC4-211ENST00000469858 AGXTP21549 392 aa16.75■□□□□ 0.27
SMC4-211ENST00000469858 PLAURQ03405 335 aa16.75■□□□□ 0.27
SMC4-211ENST00000469858 DECR1Q16698 335 aa16.75■□□□□ 0.27
SMC4-211ENST00000469858 C6orf141Q5SZD1 244 aa16.75■□□□□ 0.27
SMC4-211ENST00000469858 RBM44Q6ZP01 1051 aaKnown RBP16.75■□□□□ 0.27
SMC4-211ENST00000469858 CCDC71Q8IV32 467 aaPredicted RBP16.75■□□□□ 0.27
SMC4-211ENST00000469858 C9orf40Q8IXQ3 194 aa16.75■□□□□ 0.27
SMC4-211ENST00000469858 HDAC2Q92769 488 aaKnown RBP16.75■□□□□ 0.27
SMC4-211ENST00000469858 ARSGQ96EG1 525 aa16.75■□□□□ 0.27
SMC4-211ENST00000469858 SLC41A3Q96GZ6 507 aa16.75■□□□□ 0.27
SMC4-211ENST00000469858 EDEM2Q9BV94 578 aa16.75■□□□□ 0.27
SMC4-211ENST00000469858 YTHDF1Q9BYJ9 559 aaKnown RBP16.75■□□□□ 0.27
SMC4-211ENST00000469858 UCK2Q9BZX2 261 aa16.75■□□□□ 0.27
SMC4-211ENST00000469858 AASSQ9UDR5 926 aa16.75■□□□□ 0.27
SMC4-211ENST00000469858 ENOPH1Q9UHY7 261 aa16.75■□□□□ 0.27
SMC4-211ENST00000469858 PCDHGA6Q9Y5G7 932 aa16.75■□□□□ 0.27
SMC4-211ENST00000469858 A0A087WUU8 490 aa16.75■□□□□ 0.27
SMC4-211ENST00000469858 C2orf92A0A1B0GVN3 265 aa16.75■□□□□ 0.27
SMC4-211ENST00000469858 OR5F1O95221 314 aa16.75■□□□□ 0.27
SMC4-211ENST00000469858 NTN1O95631 604 aa16.75■□□□□ 0.27
SMC4-211ENST00000469858 TFAP2AP05549 437 aa16.75■□□□□ 0.27
SMC4-211ENST00000469858 ATP12AP54707 1039 aa16.75■□□□□ 0.27
SMC4-211ENST00000469858 MC2RQ01718 297 aa16.75■□□□□ 0.27
SMC4-211ENST00000469858 ZNF141Q15928 474 aa16.75■□□□□ 0.27
SMC4-211ENST00000469858 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.75■□□□□ 0.274e-9■■■■■ 118.1
SMC4-211ENST00000469858 GDF7Q7Z4P5 450 aa16.75■□□□□ 0.27
SMC4-211ENST00000469858 NLGN4XQ8N0W4 816 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms