RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 C5orf58C9J3I9 102 aa13.93□□□□□ -0.18
NPHP4-205ENST00000466897 K7EM74 188 aa13.93□□□□□ -0.18
NPHP4-205ENST00000466897 NME2P1O60361 137 aa13.93□□□□□ -0.18
NPHP4-205ENST00000466897 FADS1O60427 444 aa13.93□□□□□ -0.18
NPHP4-205ENST00000466897 FCMRO60667 390 aa13.93□□□□□ -0.18
NPHP4-205ENST00000466897 ICOSLGO75144 302 aa13.93□□□□□ -0.18
NPHP4-205ENST00000466897 PGM3O95394 542 aa13.93□□□□□ -0.18
NPHP4-205ENST00000466897 OXSR1O95747 527 aaPredicted RBP13.93□□□□□ -0.18
NPHP4-205ENST00000466897 P04436 131 aa13.93□□□□□ -0.18
NPHP4-205ENST00000466897 SP1P08047 785 aa13.93□□□□□ -0.18
NPHP4-205ENST00000466897 CCL3P10147 92 aa13.93□□□□□ -0.18
NPHP4-205ENST00000466897 HSD17B1P14061 328 aa13.93□□□□□ -0.18
NPHP4-205ENST00000466897 ETS2P15036 469 aa13.93□□□□□ -0.18
NPHP4-205ENST00000466897 ENDOUP21128 410 aaKnown RBP13.93□□□□□ -0.18
NPHP4-205ENST00000466897 NME2P22392 152 aa13.93□□□□□ -0.18
NPHP4-205ENST00000466897 DCTP40126 519 aa13.93□□□□□ -0.18
NPHP4-205ENST00000466897 CD97P48960 835 aa13.93□□□□□ -0.18
NPHP4-205ENST00000466897 PCBP3P57721 371 aaKnown RBP13.93□□□□□ -0.18
NPHP4-205ENST00000466897 LIPEQ05469 1076 aa13.93□□□□□ -0.18
NPHP4-205ENST00000466897 SCARB2Q14108 478 aa13.93□□□□□ -0.18
NPHP4-205ENST00000466897 INAQ16352 499 aa13.93□□□□□ -0.18
NPHP4-205ENST00000466897 FXNQ16595 210 aa13.93□□□□□ -0.18
NPHP4-205ENST00000466897 GRAMD1BQ3KR37 738 aa13.93□□□□□ -0.18
NPHP4-205ENST00000466897 INTS11Q5TA45 600 aaKnown RBP13.93□□□□□ -0.18
NPHP4-205ENST00000466897 SPINK14Q6IE38 97 aa13.93□□□□□ -0.18
NPHP4-205ENST00000466897 SLC25A25Q6KCM7 469 aa13.93□□□□□ -0.18
NPHP4-205ENST00000466897 SLC30A6Q6NXT4 461 aa13.93□□□□□ -0.18
NPHP4-205ENST00000466897 MDGA2Q7Z553 956 aa13.93□□□□□ -0.18
NPHP4-205ENST00000466897 RBMXL3Q8N7X1 1067 aaKnown RBP13.93□□□□□ -0.18
NPHP4-205ENST00000466897 TMEM178AQ8NBL3 297 aa13.93□□□□□ -0.18
NPHP4-205ENST00000466897 LSM14AQ8ND56 463 aaKnown RBP13.93□□□□□ -0.18
NPHP4-205ENST00000466897 TNIP2Q8NFZ5 429 aa13.93□□□□□ -0.18
NPHP4-205ENST00000466897 NFKBIDQ8NI38 313 aa13.93□□□□□ -0.18
NPHP4-205ENST00000466897 C5orf34Q96MH7 638 aa13.93□□□□□ -0.18
NPHP4-205ENST00000466897 FRMD6Q96NE9 622 aa13.93□□□□□ -0.18
NPHP4-205ENST00000466897 NODALQ96S42 347 aa13.93□□□□□ -0.18
NPHP4-205ENST00000466897 BTBD10Q9BSF8 475 aa13.93□□□□□ -0.18
NPHP4-205ENST00000466897 ANGPTL4Q9BY76 406 aa13.93□□□□□ -0.18
NPHP4-205ENST00000466897 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.93□□□□□ -0.18
NPHP4-205ENST00000466897 SLC25A18Q9H1K4 315 aa13.93□□□□□ -0.18
NPHP4-205ENST00000466897 RUBCNLQ9H714 662 aa13.93□□□□□ -0.18
NPHP4-205ENST00000466897 CD300AQ9UGN4 299 aa13.93□□□□□ -0.18
NPHP4-205ENST00000466897 B3GNT3Q9Y2A9 372 aa13.93□□□□□ -0.18
NPHP4-205ENST00000466897 NINQ8N4C6 2090 aa13.93□□□□□ -0.18
NPHP4-205ENST00000466897 ELOVL7A1L3X0 281 aa13.92□□□□□ -0.18
NPHP4-205ENST00000466897 PRORSD1PA6NEY8 169 aa13.92□□□□□ -0.18
NPHP4-205ENST00000466897 AGAP5A6NIR3 686 aa13.92□□□□□ -0.18
NPHP4-205ENST00000466897 ADAM10O14672 748 aa13.92□□□□□ -0.18
NPHP4-205ENST00000466897 PDE9AO76083 593 aa13.92□□□□□ -0.18
NPHP4-205ENST00000466897 SNX4O95219 450 aa13.92□□□□□ -0.18
NPHP4-205ENST00000466897 CNR1P21554 472 aa13.92□□□□□ -0.18
NPHP4-205ENST00000466897 HTR1EP28566 365 aa13.92□□□□□ -0.18
NPHP4-205ENST00000466897 ADH7P40394 386 aa13.92□□□□□ -0.18
NPHP4-205ENST00000466897 CASP3P42574 277 aa13.92□□□□□ -0.18
NPHP4-205ENST00000466897 RFX3P48380 749 aa13.92□□□□□ -0.18
NPHP4-205ENST00000466897 CLK3P49761 638 aaKnown RBP13.92□□□□□ -0.18
NPHP4-205ENST00000466897 GSK3BP49841 420 aa13.92□□□□□ -0.18
NPHP4-205ENST00000466897 CHRNEQ04844 493 aa13.92□□□□□ -0.18
NPHP4-205ENST00000466897 ZNF169Q14929 603 aaPredicted RBP13.92□□□□□ -0.18
NPHP4-205ENST00000466897 KLHL26Q53HC5 615 aa13.92□□□□□ -0.18
NPHP4-205ENST00000466897 ZNF766Q5HY98 468 aa13.92□□□□□ -0.18
NPHP4-205ENST00000466897 RPUSD3Q6P087 351 aaKnown RBP13.92□□□□□ -0.18
NPHP4-205ENST00000466897 PCSK4Q6UW60 755 aa13.92□□□□□ -0.18
NPHP4-205ENST00000466897 CCDC121Q6ZUS5 278 aa13.92□□□□□ -0.18
NPHP4-205ENST00000466897 CCDC80Q76M96 950 aa13.92□□□□□ -0.18
NPHP4-205ENST00000466897 YTHDF3Q7Z739 585 aaKnown RBP13.92□□□□□ -0.18
NPHP4-205ENST00000466897 MISPQ8IVT2 679 aa13.92□□□□□ -0.18
NPHP4-205ENST00000466897 MICU2Q8IYU8 434 aa13.92□□□□□ -0.18
NPHP4-205ENST00000466897 POGLUT1Q8NBL1 392 aa13.92□□□□□ -0.18
NPHP4-205ENST00000466897 OR5M3Q8NGP4 307 aa13.92□□□□□ -0.18
NPHP4-205ENST00000466897 OR4C3Q8NH37 302 aa13.92□□□□□ -0.18
NPHP4-205ENST00000466897 GRHL3Q8TE85 626 aa13.92□□□□□ -0.18
NPHP4-205ENST00000466897 TMEM41AQ96HV5 264 aa13.92□□□□□ -0.18
NPHP4-205ENST00000466897 UBL7Q96S82 380 aaPredicted RBP13.92□□□□□ -0.18
NPHP4-205ENST00000466897 CDRT15Q96T59 188 aa13.92□□□□□ -0.18
NPHP4-205ENST00000466897 METTL7AQ9H8H3 244 aa13.92□□□□□ -0.18
NPHP4-205ENST00000466897 PROK2Q9HC23 129 aa13.92□□□□□ -0.18
NPHP4-205ENST00000466897 ADA2Q9NZK5 511 aa13.92□□□□□ -0.18
NPHP4-205ENST00000466897 MKLN1Q9UL63 735 aa13.92□□□□□ -0.18
NPHP4-205ENST00000466897 CSAG2Q9Y5P2 127 aa13.92□□□□□ -0.18
NPHP4-205ENST00000466897 KLRC4-KLRK1H3BQV0 150 aa13.91□□□□□ -0.18
NPHP4-205ENST00000466897 SCDO00767 359 aa13.91□□□□□ -0.18
NPHP4-205ENST00000466897 GYG2O15488 501 aa13.91□□□□□ -0.18
NPHP4-205ENST00000466897 UGT2B17O75795 530 aa13.91□□□□□ -0.18
NPHP4-205ENST00000466897 F10P00742 488 aa13.91□□□□□ -0.18
NPHP4-205ENST00000466897 DBIP07108 87 aaKnown RBP13.91□□□□□ -0.18
NPHP4-205ENST00000466897 THBS1P07996 1170 aa13.91□□□□□ -0.18
NPHP4-205ENST00000466897 HPGDP15428 266 aa13.91□□□□□ -0.18
NPHP4-205ENST00000466897 PTGDSP41222 190 aa13.91□□□□□ -0.18
NPHP4-205ENST00000466897 GAS1P54826 345 aa13.91□□□□□ -0.18
NPHP4-205ENST00000466897 GPR68Q15743 365 aa13.91□□□□□ -0.18
NPHP4-205ENST00000466897 ZSWIM7Q19AV6 140 aa13.91□□□□□ -0.18
NPHP4-205ENST00000466897 DESI1Q6ICB0 168 aa13.91□□□□□ -0.18
NPHP4-205ENST00000466897 GALNT10Q86SR1 603 aa13.91□□□□□ -0.18
NPHP4-205ENST00000466897 KRT73Q86Y46 540 aa13.91□□□□□ -0.18
NPHP4-205ENST00000466897 CMIPQ8IY22 773 aa13.91□□□□□ -0.18
NPHP4-205ENST00000466897 PEX5LQ8IYB4 626 aa13.91□□□□□ -0.18
NPHP4-205ENST00000466897 CATSPER1Q8NEC5 780 aa13.91□□□□□ -0.18
NPHP4-205ENST00000466897 PNPLA2Q96AD5 504 aa13.91□□□□□ -0.18
NPHP4-205ENST00000466897 ZNF607Q96SK3 696 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms