RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 NME6O75414 186 aaPredicted RBP13.5□□□□□ -0.25
COL5A1-205ENST00000464187 CDC123O75794 336 aaPredicted RBP13.5□□□□□ -0.25
COL5A1-205ENST00000464187 SLITRK5O94991 958 aa13.5□□□□□ -0.25
COL5A1-205ENST00000464187 GPR75O95800 540 aa13.5□□□□□ -0.25
COL5A1-205ENST00000464187 TP53P04637 393 aaPredicted RBP13.5□□□□□ -0.25
COL5A1-205ENST00000464187 ADORA3P0DMS8 318 aa13.5□□□□□ -0.25
COL5A1-205ENST00000464187 CPMP14384 443 aa13.5□□□□□ -0.25
COL5A1-205ENST00000464187 CSTF2P33240 577 aaKnown RBP eCLIP13.5□□□□□ -0.25
COL5A1-205ENST00000464187 LIPAP38571 399 aa13.5□□□□□ -0.25
COL5A1-205ENST00000464187 OR1D4P47884 311 aa13.5□□□□□ -0.25
COL5A1-205ENST00000464187 PDX1P52945 283 aa13.5□□□□□ -0.25
COL5A1-205ENST00000464187 OCA2Q04671 838 aa13.5□□□□□ -0.25
COL5A1-205ENST00000464187 ZFP36L1Q07352 338 aaKnown RBP13.5□□□□□ -0.25
COL5A1-205ENST00000464187 TRA2AQ13595 282 aaKnown RBP eCLIP13.5□□□□□ -0.25
COL5A1-205ENST00000464187 ERV3-1Q14264 604 aa13.5□□□□□ -0.25
COL5A1-205ENST00000464187 IRF3Q14653 427 aa13.5□□□□□ -0.25
COL5A1-205ENST00000464187 SLX4IPQ5VYV7 408 aa13.5□□□□□ -0.25
COL5A1-205ENST00000464187 PODNL1Q6PEZ8 512 aa13.5□□□□□ -0.25
COL5A1-205ENST00000464187 SLCO6A1Q86UG4 719 aa13.5□□□□□ -0.25
COL5A1-205ENST00000464187 ADAMTS18Q8TE60 1221 aa13.5□□□□□ -0.25
COL5A1-205ENST00000464187 SLC38A4Q969I6 547 aa13.5□□□□□ -0.25
COL5A1-205ENST00000464187 PRRC1Q96M27 445 aa13.5□□□□□ -0.25
COL5A1-205ENST00000464187 PINK1Q9BXM7 581 aa13.5□□□□□ -0.25
COL5A1-205ENST00000464187 SLC38A1Q9H2H9 487 aa13.5□□□□□ -0.25
COL5A1-205ENST00000464187 TBC1D23Q9NUY8 699 aa13.5□□□□□ -0.25
COL5A1-205ENST00000464187 SIDT1Q9NXL6 827 aaKnown RBP13.5□□□□□ -0.25
COL5A1-205ENST00000464187 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.5□□□□□ -0.25
COL5A1-205ENST00000464187 MRPS33Q9Y291 106 aaKnown RBP13.5□□□□□ -0.25
COL5A1-205ENST00000464187 CORINQ9Y5Q5 1042 aa13.5□□□□□ -0.25
COL5A1-205ENST00000464187 hCG_2014768A0A024R1R8 64 aa13.5□□□□□ -0.25
COL5A1-205ENST00000464187 A0A1B0GX78 115 aa13.5□□□□□ -0.25
COL5A1-205ENST00000464187 SH3D21A4FU49 640 aa13.5□□□□□ -0.25
COL5A1-205ENST00000464187 ASNA1O43681 348 aa13.5□□□□□ -0.25
COL5A1-205ENST00000464187 PTHP01270 115 aa13.5□□□□□ -0.25
COL5A1-205ENST00000464187 ADRA2AP08913 450 aa13.5□□□□□ -0.25
COL5A1-205ENST00000464187 PORP16435 677 aaPredicted RBP13.5□□□□□ -0.25
COL5A1-205ENST00000464187 OPRL1P41146 370 aa13.5□□□□□ -0.25
COL5A1-205ENST00000464187 ST3GAL4Q11206 333 aa13.5□□□□□ -0.25
COL5A1-205ENST00000464187 TIGD6Q17RP2 521 aa13.5□□□□□ -0.25
COL5A1-205ENST00000464187 YOD1Q5VVQ6 348 aaPredicted RBP13.5□□□□□ -0.25
COL5A1-205ENST00000464187 C12orf73Q69YU5 71 aa13.5□□□□□ -0.25
COL5A1-205ENST00000464187 FAM111BQ6SJ93 734 aa13.5□□□□□ -0.25
COL5A1-205ENST00000464187 STX19Q8N4C7 294 aa13.5□□□□□ -0.25
COL5A1-205ENST00000464187 DYNC2LI1Q8TCX1 351 aa13.5□□□□□ -0.25
COL5A1-205ENST00000464187 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.5□□□□□ -0.25
COL5A1-205ENST00000464187 ANKRD9Q96BM1 317 aaPredicted RBP13.5□□□□□ -0.25
COL5A1-205ENST00000464187 PLEKHA8Q96JA3 519 aa13.5□□□□□ -0.25
COL5A1-205ENST00000464187 FNDC11Q9BVV2 318 aa13.5□□□□□ -0.25
COL5A1-205ENST00000464187 ALOXE3Q9BYJ1 711 aa13.5□□□□□ -0.25
COL5A1-205ENST00000464187 SLC7A5P2Q9GIP4 190 aa13.5□□□□□ -0.25
COL5A1-205ENST00000464187 CLN6Q9NWW5 311 aa13.5□□□□□ -0.25
COL5A1-205ENST00000464187 OCIAD1Q9NX40 245 aa13.5□□□□□ -0.25
COL5A1-205ENST00000464187 RARRES3Q9UL19 164 aa13.5□□□□□ -0.25
COL5A1-205ENST00000464187 OTOGLQ3ZCN5 2332 aa13.5□□□□□ -0.25
COL5A1-205ENST00000464187 COL5A1P20908 1838 aaPredicted RBP13.5□□□□□ -0.25
COL5A1-205ENST00000464187 J3QRK9 145 aa13.49□□□□□ -0.25
COL5A1-205ENST00000464187 M0R3G1 203 aa13.49□□□□□ -0.25
COL5A1-205ENST00000464187 DSCR3O14972 297 aa13.49□□□□□ -0.25
COL5A1-205ENST00000464187 TPST2O60704 377 aa13.49□□□□□ -0.25
COL5A1-205ENST00000464187 LRP3O75074 770 aa13.49□□□□□ -0.25
COL5A1-205ENST00000464187 ZIC2O95409 532 aaPredicted RBP13.49□□□□□ -0.25
COL5A1-205ENST00000464187 TIAF1O95411 115 aa13.49□□□□□ -0.25
COL5A1-205ENST00000464187 TGFBR1P36897 503 aa13.49□□□□□ -0.25
COL5A1-205ENST00000464187 CHRNEQ04844 493 aa13.49□□□□□ -0.25
COL5A1-205ENST00000464187 TARDBPQ13148 414 aaKnown RBP eCLIP13.49□□□□□ -0.25
COL5A1-205ENST00000464187 C1orf189Q5VU69 101 aa13.49□□□□□ -0.25
COL5A1-205ENST00000464187 WDR53Q7Z5U6 358 aaPredicted RBP13.49□□□□□ -0.25
COL5A1-205ENST00000464187 ZNF595Q8IYB9 648 aa13.49□□□□□ -0.25
COL5A1-205ENST00000464187 MORN4Q8NDC4 146 aa13.49□□□□□ -0.25
COL5A1-205ENST00000464187 OR7G2Q8NG99 324 aa13.49□□□□□ -0.25
COL5A1-205ENST00000464187 ZNF675Q8TD23 568 aa13.49□□□□□ -0.25
COL5A1-205ENST00000464187 TRUB1Q8WWH5 349 aaKnown RBP13.49□□□□□ -0.25
COL5A1-205ENST00000464187 RNF31Q96EP0 1072 aa13.49□□□□□ -0.25
COL5A1-205ENST00000464187 YIPF2Q9BWQ6 316 aa13.49□□□□□ -0.25
COL5A1-205ENST00000464187 ACTRT3Q9BYD9 372 aa13.49□□□□□ -0.25
COL5A1-205ENST00000464187 GIN1Q9NXP7 522 aa13.49□□□□□ -0.25
COL5A1-205ENST00000464187 TAS2R16Q9NYV7 291 aa13.49□□□□□ -0.25
COL5A1-205ENST00000464187 CNOT2Q9NZN8 540 aaKnown RBP13.49□□□□□ -0.25
COL5A1-205ENST00000464187 NTMQ9P121 344 aa13.49□□□□□ -0.25
COL5A1-205ENST00000464187 SRPK3Q9UPE1 567 aa13.49□□□□□ -0.25
COL5A1-205ENST00000464187 PMF1-BGLAPU3KQ54 211 aa13.49□□□□□ -0.25
COL5A1-205ENST00000464187 BLACEA4D250 179 aa13.48□□□□□ -0.25
COL5A1-205ENST00000464187 EFCAB10A6NFE3 127 aa13.48□□□□□ -0.25
COL5A1-205ENST00000464187 CLDN4O14493 209 aa13.48□□□□□ -0.25
COL5A1-205ENST00000464187 GDF9O60383 454 aa13.48□□□□□ -0.25
COL5A1-205ENST00000464187 ATP1B1P05026 303 aa13.48□□□□□ -0.25
COL5A1-205ENST00000464187 ALPPP05187 535 aa13.48□□□□□ -0.25
COL5A1-205ENST00000464187 TGM1P22735 817 aa13.48□□□□□ -0.25
COL5A1-205ENST00000464187 SLC15A1P46059 708 aa13.48□□□□□ -0.25
COL5A1-205ENST00000464187 SNRPGP62308 76 aaKnown RBP13.48□□□□□ -0.25
COL5A1-205ENST00000464187 SLC13A2Q13183 592 aa13.48□□□□□ -0.25
COL5A1-205ENST00000464187 DSG2Q14126 1118 aa13.48□□□□□ -0.25
COL5A1-205ENST00000464187 CCDC157Q569K6 752 aa13.48□□□□□ -0.25
COL5A1-205ENST00000464187 RHBDD2Q6NTF9 364 aa13.48□□□□□ -0.25
COL5A1-205ENST00000464187 PPP1R3BQ86XI6 285 aa13.48□□□□□ -0.25
COL5A1-205ENST00000464187 VRK2Q86Y07 508 aa13.48□□□□□ -0.25
COL5A1-205ENST00000464187 AGBL5Q8NDL9 886 aa13.48□□□□□ -0.25
COL5A1-205ENST00000464187 OR4K5Q8NGD3 323 aa13.48□□□□□ -0.25
COL5A1-205ENST00000464187 B4GALNT2Q8NHY0 566 aa13.48□□□□□ -0.25
COL5A1-205ENST00000464187 TRNT1Q96Q11 434 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms