RNA–Protein interactions for RNA: ENST00000463372.5

C9orf3-211, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 919 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-211ENST00000463372 COX5AP20674 150 aa11.61□□□□□ -0.55
C9orf3-211ENST00000463372 NT5EP21589 574 aa11.61□□□□□ -0.55
C9orf3-211ENST00000463372 DRD5P21918 477 aa11.61□□□□□ -0.55
C9orf3-211ENST00000463372 PIK3R1P27986 724 aa11.61□□□□□ -0.55
C9orf3-211ENST00000463372 CETN2P41208 172 aa11.61□□□□□ -0.55
C9orf3-211ENST00000463372 GPR6P46095 362 aaPredicted RBP11.61□□□□□ -0.55
C9orf3-211ENST00000463372 OR3A2P47893 321 aa11.61□□□□□ -0.55
C9orf3-211ENST00000463372 ZBED6P86452 979 aa11.61□□□□□ -0.55
C9orf3-211ENST00000463372 MYBPC1Q00872 1141 aa11.61□□□□□ -0.55
C9orf3-211ENST00000463372 IL1RL1Q01638 556 aa11.61□□□□□ -0.55
C9orf3-211ENST00000463372 STX5Q13190 355 aa11.61□□□□□ -0.55
C9orf3-211ENST00000463372 SLC9A3R2Q15599 337 aa11.61□□□□□ -0.55
C9orf3-211ENST00000463372 C2orf68Q2NKX9 166 aa11.61□□□□□ -0.55
C9orf3-211ENST00000463372 DCAF12L2Q5VW00 463 aa11.61□□□□□ -0.55
C9orf3-211ENST00000463372 OR4C11Q6IEV9 310 aa11.61□□□□□ -0.55
C9orf3-211ENST00000463372 CCDC116Q8IYX3 515 aa11.61□□□□□ -0.55
C9orf3-211ENST00000463372 ZNF433Q8N7K0 673 aaPredicted RBP11.61□□□□□ -0.55
C9orf3-211ENST00000463372 OSTF1Q92882 214 aa11.61□□□□□ -0.55
C9orf3-211ENST00000463372 PLK3Q9H4B4 646 aa11.61□□□□□ -0.55
C9orf3-211ENST00000463372 WDR41Q9HAD4 459 aa11.61□□□□□ -0.55
C9orf3-211ENST00000463372 SAP18O00422 153 aaKnown RBP11.6□□□□□ -0.55
C9orf3-211ENST00000463372 TO15178 435 aa11.6□□□□□ -0.55
C9orf3-211ENST00000463372 PRKD3O94806 890 aa11.6□□□□□ -0.55
C9orf3-211ENST00000463372 WDR47O94967 919 aa11.6□□□□□ -0.55
C9orf3-211ENST00000463372 NR2F6P10588 404 aa11.6□□□□□ -0.55
C9orf3-211ENST00000463372 PTPN7P35236 360 aa11.6□□□□□ -0.55
C9orf3-211ENST00000463372 PPICP45877 212 aa11.6□□□□□ -0.55
C9orf3-211ENST00000463372 RAG2P55895 527 aa11.6□□□□□ -0.55
C9orf3-211ENST00000463372 CARD18P57730 90 aa11.6□□□□□ -0.55
C9orf3-211ENST00000463372 THOC5Q13769 683 aaKnown RBP11.6□□□□□ -0.55
C9orf3-211ENST00000463372 ZNF311Q5JNZ3 666 aa11.6□□□□□ -0.55
C9orf3-211ENST00000463372 ACSM5Q6NUN0 579 aa11.6□□□□□ -0.55
C9orf3-211ENST00000463372 C16orf87Q6PH81 154 aa11.6□□□□□ -0.55
C9orf3-211ENST00000463372 PAQR3Q6TCH7 311 aa11.6□□□□□ -0.55
C9orf3-211ENST00000463372 LARP4Q71RC2 724 aaKnown RBP eCLIP11.6□□□□□ -0.55
C9orf3-211ENST00000463372 DENND6AQ8IWF6 608 aa11.6□□□□□ -0.55
C9orf3-211ENST00000463372 NAP1L3Q99457 506 aaPredicted RBP11.6□□□□□ -0.55
C9orf3-211ENST00000463372 SORBS1Q9BX66 1292 aaKnown RBP11.6□□□□□ -0.55
C9orf3-211ENST00000463372 MS4A8Q9BY19 250 aa11.6□□□□□ -0.55
C9orf3-211ENST00000463372 C7orf69Q9H7B7 122 aa11.6□□□□□ -0.55
C9orf3-211ENST00000463372 RAB6BQ9NRW1 208 aa11.6□□□□□ -0.55
C9orf3-211ENST00000463372 NECAP2Q9NVZ3 263 aa11.6□□□□□ -0.55
C9orf3-211ENST00000463372 AURKAIP1Q9NWT8 199 aaPredicted RBP11.6□□□□□ -0.55
C9orf3-211ENST00000463372 ZNF490Q9ULM2 529 aaPredicted RBP11.6□□□□□ -0.55
C9orf3-211ENST00000463372 SACSQ9NZJ4 4579 aa11.6□□□□□ -0.55
C9orf3-211ENST00000463372 TET2Q6N021 2002 aaPredicted RBP11.6□□□□□ -0.55
C9orf3-211ENST00000463372 RYR1P21817 5038 aa11.59□□□□□ -0.55
C9orf3-211ENST00000463372 AP3B1O00203 1094 aa11.59□□□□□ -0.55
C9orf3-211ENST00000463372 CLGNO14967 610 aa11.59□□□□□ -0.55
C9orf3-211ENST00000463372 MPZL1O95297 269 aa11.59□□□□□ -0.55
C9orf3-211ENST00000463372 FSHBP01225 129 aa11.59□□□□□ -0.55
C9orf3-211ENST00000463372 CRYBA1P05813 215 aa11.59□□□□□ -0.55
C9orf3-211ENST00000463372 ME2P23368 584 aa11.59□□□□□ -0.55
C9orf3-211ENST00000463372 ZNF239Q16600 458 aaKnown RBP11.59□□□□□ -0.55
C9orf3-211ENST00000463372 ANKRD22Q5VYY1 191 aa11.59□□□□□ -0.55
C9orf3-211ENST00000463372 RNF10Q8N5U6 811 aaKnown RBP11.59□□□□□ -0.55
C9orf3-211ENST00000463372 SGCDQ92629 289 aa11.59□□□□□ -0.55
C9orf3-211ENST00000463372 LRRC1Q9BTT6 524 aa11.59□□□□□ -0.55
C9orf3-211ENST00000463372 CAPS2Q9BXY5 557 aa11.59□□□□□ -0.55
C9orf3-211ENST00000463372 BRINP2Q9C0B6 783 aa11.59□□□□□ -0.55
C9orf3-211ENST00000463372 TCF7L1Q9HCS4 588 aa11.59□□□□□ -0.55
C9orf3-211ENST00000463372 TIGARQ9NQ88 270 aa11.59□□□□□ -0.55
C9orf3-211ENST00000463372 TAS2R13Q9NYV9 303 aa11.59□□□□□ -0.55
C9orf3-211ENST00000463372 A0A0J9YW62 118 aa11.58□□□□□ -0.56
C9orf3-211ENST00000463372 A0A1W2PS29 197 aa11.58□□□□□ -0.56
C9orf3-211ENST00000463372 CLPSL1A2RUU4 121 aa11.58□□□□□ -0.56
C9orf3-211ENST00000463372 C5orf63A6NC05 138 aa11.58□□□□□ -0.56
C9orf3-211ENST00000463372 AKR1B10O60218 316 aa11.58□□□□□ -0.56
C9orf3-211ENST00000463372 TSPAN2O60636 221 aa11.58□□□□□ -0.56
C9orf3-211ENST00000463372 OR4A8P0C604 315 aa11.58□□□□□ -0.56
C9orf3-211ENST00000463372 SELEP16581 610 aa11.58□□□□□ -0.56
C9orf3-211ENST00000463372 S1PR1P21453 382 aa11.58□□□□□ -0.56
C9orf3-211ENST00000463372 EVI2BP34910 448 aa11.58□□□□□ -0.56
C9orf3-211ENST00000463372 SLC1A3P43003 542 aa11.58□□□□□ -0.56
C9orf3-211ENST00000463372 RAP1GDS1P52306 607 aa11.58□□□□□ -0.56
C9orf3-211ENST00000463372 KRTAP10-3P60369 221 aa11.58□□□□□ -0.56
C9orf3-211ENST00000463372 IL2P60568 153 aa11.58□□□□□ -0.56
C9orf3-211ENST00000463372 RAB10P61026 200 aa11.58□□□□□ -0.56
C9orf3-211ENST00000463372 MRPS22P82650 360 aaKnown RBP11.58□□□□□ -0.56
C9orf3-211ENST00000463372 EXOSC7Q15024 291 aaKnown RBP11.58□□□□□ -0.56
C9orf3-211ENST00000463372 EFNB3Q15768 340 aa11.58□□□□□ -0.56
C9orf3-211ENST00000463372 TUSC1Q2TAM9 212 aa11.58□□□□□ -0.56
C9orf3-211ENST00000463372 R3HCC1LQ7Z5L2 792 aaKnown RBP11.58□□□□□ -0.56
C9orf3-211ENST00000463372 TREML1Q86YW5 311 aa11.58□□□□□ -0.56
C9orf3-211ENST00000463372 ZCCHC24Q8N2G6 241 aaKnown RBP11.58□□□□□ -0.56
C9orf3-211ENST00000463372 RNF138Q8WVD3 245 aa11.58□□□□□ -0.56
C9orf3-211ENST00000463372 CPNE4Q96A23 557 aaPredicted RBP11.58□□□□□ -0.56
C9orf3-211ENST00000463372 EGFL8Q99944 293 aa11.58□□□□□ -0.56
C9orf3-211ENST00000463372 RACGAP1Q9H0H5 632 aa11.58□□□□□ -0.56
C9orf3-211ENST00000463372 CA10Q9NS85 328 aa11.58□□□□□ -0.56
C9orf3-211ENST00000463372 PRODH2Q9UF12 536 aa11.58□□□□□ -0.56
C9orf3-211ENST00000463372 SOX13Q9UN79 622 aa11.58□□□□□ -0.56
C9orf3-211ENST00000463372 VDAC3Q9Y277 283 aa11.58□□□□□ -0.56
C9orf3-211ENST00000463372 C3orf84H3BNL1 204 aa11.57□□□□□ -0.56
C9orf3-211ENST00000463372 PLPP2O43688 288 aa11.57□□□□□ -0.56
C9orf3-211ENST00000463372 GMFGO60234 142 aa11.57□□□□□ -0.56
C9orf3-211ENST00000463372 SLITRK5O94991 958 aa11.57□□□□□ -0.56
C9orf3-211ENST00000463372 TGFB1P01137 390 aa11.57□□□□□ -0.56
C9orf3-211ENST00000463372 NGFP01138 241 aa11.57□□□□□ -0.56
C9orf3-211ENST00000463372 IFNB1P01574 187 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms