RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 NPAP1Q9NZP6 1156 aa17.14■□□□□ 0.33
SEMA3B-209ENST00000456560 C19orf53Q9UNZ5 99 aaPredicted RBP17.14■□□□□ 0.33
SEMA3B-209ENST00000456560 WDR45Q9Y484 360 aa17.14■□□□□ 0.33
SEMA3B-209ENST00000456560 OR6C74A6NCV1 312 aa17.13■□□□□ 0.33
SEMA3B-209ENST00000456560 ZNF136P52737 540 aa17.13■□□□□ 0.33
SEMA3B-209ENST00000456560 EEF1A1P68104 462 aaKnown RBP17.13■□□□□ 0.33
SEMA3B-209ENST00000456560 HTR4Q13639 388 aa17.13■□□□□ 0.33
SEMA3B-209ENST00000456560 GPR18Q14330 331 aa17.13■□□□□ 0.33
SEMA3B-209ENST00000456560 CLEC12AQ5QGZ9 265 aa17.13■□□□□ 0.33
SEMA3B-209ENST00000456560 ATAD3CQ5T2N8 411 aa17.13■□□□□ 0.33
SEMA3B-209ENST00000456560 OR2G6Q5TZ20 316 aa17.13■□□□□ 0.33
SEMA3B-209ENST00000456560 AADACL4Q5VUY2 407 aa17.13■□□□□ 0.33
SEMA3B-209ENST00000456560 NRMQ8IXM6 262 aa17.13■□□□□ 0.33
SEMA3B-209ENST00000456560 PEX5LQ8IYB4 626 aa17.13■□□□□ 0.33
SEMA3B-209ENST00000456560 CAMKVQ8NCB2 501 aa17.13■□□□□ 0.33
SEMA3B-209ENST00000456560 TOR1AIP2Q8NFQ8 470 aa17.13■□□□□ 0.33
SEMA3B-209ENST00000456560 NELL2Q99435 816 aa17.13■□□□□ 0.33
SEMA3B-209ENST00000456560 PRRG3Q9BZD7 231 aa17.13■□□□□ 0.33
SEMA3B-209ENST00000456560 DDX28Q9NUL7 540 aaKnown RBP17.13■□□□□ 0.33
SEMA3B-209ENST00000456560 MRPS2Q9Y399 296 aaKnown RBP17.13■□□□□ 0.33
SEMA3B-209ENST00000456560 EXOSC1Q9Y3B2 195 aaKnown RBP17.13■□□□□ 0.33
SEMA3B-209ENST00000456560 SF3B6Q9Y3B4 125 aaKnown RBP17.13■□□□□ 0.33
SEMA3B-209ENST00000456560 N6AMT1Q9Y5N5 214 aa17.13■□□□□ 0.33
SEMA3B-209ENST00000456560 SPIN1Q9Y657 262 aaPredicted RBP17.13■□□□□ 0.33
SEMA3B-209ENST00000456560 F5P12259 2224 aa17.13■□□□□ 0.33
SEMA3B-209ENST00000456560 SLC35F4A4IF30 521 aa17.13■□□□□ 0.33
SEMA3B-209ENST00000456560 PLD2O14939 933 aa17.13■□□□□ 0.33
SEMA3B-209ENST00000456560 SURF4O15260 269 aa17.13■□□□□ 0.33
SEMA3B-209ENST00000456560 APOL3O95236 402 aa17.13■□□□□ 0.33
SEMA3B-209ENST00000456560 LIMS3P0CW19 117 aa17.13■□□□□ 0.33
SEMA3B-209ENST00000456560 LIMS4P0CW20 117 aa17.13■□□□□ 0.33
SEMA3B-209ENST00000456560 DUSP8Q13202 625 aa17.13■□□□□ 0.33
SEMA3B-209ENST00000456560 LARS2Q15031 903 aaKnown RBP17.13■□□□□ 0.33
SEMA3B-209ENST00000456560 TRMT12Q53H54 448 aaKnown RBP17.13■□□□□ 0.33
SEMA3B-209ENST00000456560 ZNF485Q8NCK3 441 aa17.13■□□□□ 0.33
SEMA3B-209ENST00000456560 OR6F1Q8NGZ6 308 aa17.13■□□□□ 0.33
SEMA3B-209ENST00000456560 TMEM255BQ8WV15 326 aa17.13■□□□□ 0.33
SEMA3B-209ENST00000456560 ASB15Q8WXK1 588 aa17.13■□□□□ 0.33
SEMA3B-209ENST00000456560 WDFY2Q96P53 400 aa17.13■□□□□ 0.33
SEMA3B-209ENST00000456560 PIGUQ9H490 435 aa17.13■□□□□ 0.33
SEMA3B-209ENST00000456560 LYRM4Q9HD34 91 aa17.13■□□□□ 0.33
SEMA3B-209ENST00000456560 CENPVL1A0A0U1RR11 272 aa17.12■□□□□ 0.33
SEMA3B-209ENST00000456560 IQCMA0A1B0GVH7 501 aa17.12■□□□□ 0.33
SEMA3B-209ENST00000456560 FAM172BPA6NC97 362 aa17.12■□□□□ 0.33
SEMA3B-209ENST00000456560 PIP5K1CO60331 668 aa17.12■□□□□ 0.33
SEMA3B-209ENST00000456560 IL1AP01583 271 aa17.12■□□□□ 0.33
SEMA3B-209ENST00000456560 GPR4P46093 362 aa17.12■□□□□ 0.33
SEMA3B-209ENST00000456560 RGS19P49795 217 aa17.12■□□□□ 0.33
SEMA3B-209ENST00000456560 TFF2Q03403 129 aa17.12■□□□□ 0.33
SEMA3B-209ENST00000456560 PLK5Q496M5 336 aa17.12■□□□□ 0.33
SEMA3B-209ENST00000456560 SLC30A6Q6NXT4 461 aa17.12■□□□□ 0.33
SEMA3B-209ENST00000456560 KIAA1324Q6UXG2 1013 aaKnown RBP17.12■□□□□ 0.33
SEMA3B-209ENST00000456560 LAPTM4BQ86VI4 370 aa17.12■□□□□ 0.33
SEMA3B-209ENST00000456560 UBQLNLQ8IYU4 475 aa17.12■□□□□ 0.33
SEMA3B-209ENST00000456560 GALNT6Q8NCL4 622 aa17.12■□□□□ 0.33
SEMA3B-209ENST00000456560 PSD4Q8NDX1 1056 aa17.12■□□□□ 0.33
SEMA3B-209ENST00000456560 OR10G6Q8NH81 332 aa17.12■□□□□ 0.33
SEMA3B-209ENST00000456560 LILRB4Q8NHJ6 448 aa17.12■□□□□ 0.33
SEMA3B-209ENST00000456560 TP53INP1Q96A56 240 aa17.12■□□□□ 0.33
SEMA3B-209ENST00000456560 RIPOR3Q96MK2 946 aa17.12■□□□□ 0.33
SEMA3B-209ENST00000456560 IL21RQ9HBE5 538 aa17.12■□□□□ 0.33
SEMA3B-209ENST00000456560 THBS1P07996 1170 aa17.12■□□□□ 0.33
SEMA3B-209ENST00000456560 TSPAN19P0C672 248 aa17.12■□□□□ 0.33
SEMA3B-209ENST00000456560 NDUFV2P19404 249 aa17.12■□□□□ 0.33
SEMA3B-209ENST00000456560 RPS4Y1P22090 263 aaKnown RBP17.12■□□□□ 0.33
SEMA3B-209ENST00000456560 HTR3AP46098 478 aa17.12■□□□□ 0.33
SEMA3B-209ENST00000456560 LSSP48449 732 aa17.12■□□□□ 0.33
SEMA3B-209ENST00000456560 YPEL5P62699 121 aa17.12■□□□□ 0.33
SEMA3B-209ENST00000456560 ZNF620Q6ZNG0 422 aa17.12■□□□□ 0.33
SEMA3B-209ENST00000456560 ABHD13Q7L211 337 aa17.12■□□□□ 0.33
SEMA3B-209ENST00000456560 C11orf74Q86VG3 221 aa17.12■□□□□ 0.33
SEMA3B-209ENST00000456560 C17orf50Q8WW18 174 aa17.12■□□□□ 0.33
SEMA3B-209ENST00000456560 ZFPM2Q8WW38 1151 aa17.12■□□□□ 0.33
SEMA3B-209ENST00000456560 GATAD2BQ8WXI9 593 aa17.12■□□□□ 0.33
SEMA3B-209ENST00000456560 SLC25A46Q96AG3 418 aa17.12■□□□□ 0.33
SEMA3B-209ENST00000456560 ZFYVE21Q9BQ24 234 aa17.12■□□□□ 0.33
SEMA3B-209ENST00000456560 ZNF350Q9GZX5 532 aa17.12■□□□□ 0.33
SEMA3B-209ENST00000456560 MED17Q9NVC6 651 aa17.12■□□□□ 0.33
SEMA3B-209ENST00000456560 EVA1BQ9NVM1 165 aa17.12■□□□□ 0.33
SEMA3B-209ENST00000456560 V9GYH0 126 aa17.12■□□□□ 0.33
SEMA3B-209ENST00000456560 H0YGG7 62 aa17.11■□□□□ 0.33
SEMA3B-209ENST00000456560 H3BQ06 376 aaPredicted RBP17.11■□□□□ 0.33
SEMA3B-209ENST00000456560 CDRT1O95170 752 aa17.11■□□□□ 0.33
SEMA3B-209ENST00000456560 MSL3P1P0C860 447 aa17.11■□□□□ 0.33
SEMA3B-209ENST00000456560 ZNF10P21506 573 aaPredicted RBP17.11■□□□□ 0.33
SEMA3B-209ENST00000456560 IGFBP4P22692 258 aa17.11■□□□□ 0.33
SEMA3B-209ENST00000456560 TPMTP51580 245 aa17.11■□□□□ 0.33
SEMA3B-209ENST00000456560 ARF3P61204 181 aaPredicted RBP17.11■□□□□ 0.33
SEMA3B-209ENST00000456560 PSPHP78330 225 aa17.11■□□□□ 0.33
SEMA3B-209ENST00000456560 MRPS21P82921 87 aaKnown RBP17.11■□□□□ 0.33
SEMA3B-209ENST00000456560 PGGHGQ32M88 737 aa17.11■□□□□ 0.33
SEMA3B-209ENST00000456560 TMEM31Q5JXX7 168 aa17.11■□□□□ 0.33
SEMA3B-209ENST00000456560 TMEM92Q6UXU6 159 aa17.11■□□□□ 0.33
SEMA3B-209ENST00000456560 GATAD2AQ86YP4 633 aa17.11■□□□□ 0.33
SEMA3B-209ENST00000456560 SHISA5Q8N114 240 aa17.11■□□□□ 0.33
SEMA3B-209ENST00000456560 CLDN22Q8N7P3 220 aa17.11■□□□□ 0.33
SEMA3B-209ENST00000456560 GPR151Q8TDV0 419 aa17.11■□□□□ 0.33
SEMA3B-209ENST00000456560 RSC1A1Q92681 617 aa17.11■□□□□ 0.33
SEMA3B-209ENST00000456560 PRSS27Q9BQR3 290 aa17.11■□□□□ 0.33
SEMA3B-209ENST00000456560 ARHGAP9Q9BRR9 750 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms