RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 CXorf36Q9H7Y0 433 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 CNOT2Q9NZN8 540 aaKnown RBP4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 RNF181Q9P0P0 153 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 GHRLQ9UBU3 117 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 KCNG2Q9UJ96 466 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 FBXW2Q9UKT8 454 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 ENPP4Q9Y6X5 453 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 PLXNA3P51805 1871 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 NF1P21359 2839 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 ARPC4-TTLL3A0A0A6YYG9 625 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 A0A1W2PQH9 124 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 SLC9B1P1A6NJY1 282 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 COLCA2A8K830 154 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 G3V3G9 751 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 TLR4O00206 839 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 GABRPO00591 440 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 ZNF821O75541 412 aaPredicted RBP4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 SNAI1O95863 264 aaPredicted RBP4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 GRK4P32298 578 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 HOXA1P49639 335 aaPredicted RBP4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 GEMP55040 296 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 PFN3P60673 137 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 ARF5P84085 180 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 ILKQ13418 452 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 VEZF1Q14119 521 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 ARHGEF7Q14155 803 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 SYTL3Q4VX76 610 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 INO80DQ53TQ3 878 aaPredicted RBP4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 DDI2Q5TDH0 399 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 THSD4Q6ZMP0 1018 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 PLA2G15Q8NCC3 412 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 OR1S2Q8NGQ3 325 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 NFKBIDQ8NI38 313 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 DNAJB3Q8WWF6 145 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 SUSD6Q92537 303 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 NSMAFQ92636 917 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 SCRN2Q96FV2 425 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 IP6K3Q96PC2 410 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 EPYCQ99645 322 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 CCSER2Q9H7U1 834 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 ING3Q9NXR8 418 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 SAMD4AQ9UPU9 718 aaKnown RBP4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 TLN1Q9Y490 2541 aaKnown RBP4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 SPG11Q96JI7 2443 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 LRRC72A6NJI9 287 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 HNRNPCL2B2RXH8 293 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 ATXN7O15265 892 aaPredicted RBP4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 PROM1O43490 865 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 NARSO43776 548 aaKnown RBP4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 B3GAT3O94766 335 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 INHAP05111 366 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 EPHX1P07099 455 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 ADRA2CP18825 462 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 ATP5C1P36542 298 aaKnown RBP4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 ERVK-25P63136 954 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 SPIBQ01892 262 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 CACNG1Q06432 222 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 ZNF33AQ06730 810 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 LINC00303Q3SY05 128 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 MFSD12Q6NUT3 480 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 FAM151BQ6UXP7 276 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 TMPPEQ6ZT21 453 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 USP45Q70EL2 814 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 TMEM173Q86WV6 379 aaPredicted RBP4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 NUDT13Q86X67 352 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 IFNL1Q8IU54 200 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 HDDC3Q8N4P3 179 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 GPR26Q8NDV2 337 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 OR14A16Q8NHC5 309 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 UPF1Q92900 1129 aaKnown RBP eCLIP4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 NEIL2Q969S2 332 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 ZDHHC12Q96GR4 267 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 CEP19Q96LK0 163 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 ZSWIM3Q96MP5 696 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 ZNF582Q96NG8 517 aaPredicted RBP4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 SLC19A3Q9BZV2 496 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 CHRDQ9H2X0 955 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 ZNF275Q9NSD4 429 aaPredicted RBP4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 C2orf42Q9NWW7 574 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 BABAM2Q9NXR7 383 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 MRPL39Q9NYK5 338 aaKnown RBP4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 DNAJB11Q9UBS4 358 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 ATP6V1HQ9UI12 483 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 DUSP12Q9UNI6 340 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 OR10H1Q9Y4A9 318 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 PCDHB11Q9Y5F2 797 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 LOC285556D6RIA3 1793 aa4.23□□□□□ -1.73
DEPDC1-202ENST00000456315 FRMPD3Q5JV73 1810 aa4.23□□□□□ -1.73
DEPDC1-202ENST00000456315 TRABD2BA6NFA1 517 aa4.23□□□□□ -1.73
DEPDC1-202ENST00000456315 AGAP14A8MT82 685 aa4.23□□□□□ -1.73
DEPDC1-202ENST00000456315 E7EQ34 232 aa4.23□□□□□ -1.73
DEPDC1-202ENST00000456315 SMAD9O15198 467 aaKnown RBP4.23□□□□□ -1.73
DEPDC1-202ENST00000456315 DHFRP00374 187 aa4.23□□□□□ -1.73
DEPDC1-202ENST00000456315 GP1BAP07359 652 aa4.23□□□□□ -1.73
DEPDC1-202ENST00000456315 ANXA3P12429 323 aa4.23□□□□□ -1.73
DEPDC1-202ENST00000456315 DAOP14920 347 aa4.23□□□□□ -1.73
DEPDC1-202ENST00000456315 KCNE1P15382 129 aa4.23□□□□□ -1.73
DEPDC1-202ENST00000456315 ACADLP28330 430 aa4.23□□□□□ -1.73
DEPDC1-202ENST00000456315 SLC1A3P43003 542 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms